RNA–Protein interactions for RNA: ENST00000530522.1

THUMPD2-208, Transcript of THUMP domain containing 2, humanhuman

TSL 2

Gene THUMPD2, Length 1,561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-208ENST00000530522 NISCHQ9Y2I1 1504 aa38.27■■■■□ 3.72
THUMPD2-208ENST00000530522 CCDC180Q9P1Z9 1646 aa33.58■■■□□ 2.97
THUMPD2-208ENST00000530522 ABCC9O60706 1549 aa32.18■■■□□ 2.74
THUMPD2-208ENST00000530522 ZCCHC6Q5VYS8 1495 aaKnown RBP32.06■■■□□ 2.72
THUMPD2-208ENST00000530522 DCAF8L2P0C7V8 631 aa31.85■■■□□ 2.69
THUMPD2-208ENST00000530522 DCAF1Q9Y4B6 1507 aa31.63■■■□□ 2.65
THUMPD2-208ENST00000530522 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
THUMPD2-208ENST00000530522 NACADO15069 1562 aa31.4■■■□□ 2.62
THUMPD2-208ENST00000530522 RB1CC1Q8TDY2 1594 aa31.25■■■□□ 2.59
THUMPD2-208ENST00000530522 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.55
THUMPD2-208ENST00000530522 SCRIBQ14160 1630 aa30.84■■■□□ 2.53
THUMPD2-208ENST00000530522 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
THUMPD2-208ENST00000530522 PABPN1Q86U42 306 aaKnown RBP eCLIP30.27■■■□□ 2.44
THUMPD2-208ENST00000530522 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
THUMPD2-208ENST00000530522 CECR2Q9BXF3 1484 aa29.75■■■□□ 2.35
THUMPD2-208ENST00000530522 BAZ1AQ9NRL2 1556 aaPredicted RBP29.61■■■□□ 2.33
THUMPD2-208ENST00000530522 SUPT5HO00267 1087 aaKnown RBP29.58■■■□□ 2.33
THUMPD2-208ENST00000530522 MROH2BQ7Z745 1585 aa29.53■■■□□ 2.32
THUMPD2-208ENST00000530522 SMARCA4P51532 1647 aa29.51■■■□□ 2.31
THUMPD2-208ENST00000530522 RSF1Q96T23 1441 aaPredicted RBP29.51■■■□□ 2.31
THUMPD2-208ENST00000530522 EIF4G1Q04637 1599 aaKnown RBP29.42■■■□□ 2.3
THUMPD2-208ENST00000530522 WIZO95785 1651 aa29.27■■■□□ 2.28
THUMPD2-208ENST00000530522 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
THUMPD2-208ENST00000530522 SMARCA2P51531 1590 aa29.15■■■□□ 2.26
THUMPD2-208ENST00000530522 ATAD2BQ9ULI0 1458 aa29.14■■■□□ 2.26
THUMPD2-208ENST00000530522 CC2D2AQ9P2K1 1620 aa29.09■■■□□ 2.25
THUMPD2-208ENST00000530522 BAZ1BQ9UIG0 1483 aaKnown RBP29■■■□□ 2.23
THUMPD2-208ENST00000530522 TOP2AP11388 1531 aaKnown RBP28.98■■■□□ 2.23
THUMPD2-208ENST00000530522 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
THUMPD2-208ENST00000530522 HMGXB3Q12766 1538 aa28.9■■■□□ 2.22
THUMPD2-208ENST00000530522 DNAJC5BQ9UF47 199 aa28.72■■■□□ 2.19
THUMPD2-208ENST00000530522 CCDC88BA6NC98 1476 aa28.67■■■□□ 2.18
THUMPD2-208ENST00000530522 CADPSQ9ULU8 1353 aa28.22■■■□□ 2.11
THUMPD2-208ENST00000530522 CFTRP13569 1480 aa28.21■■■□□ 2.11
THUMPD2-208ENST00000530522 LAMC3Q9Y6N6 1575 aa28.08■■■□□ 2.09
THUMPD2-208ENST00000530522 NESP48681 1621 aa28.08■■■□□ 2.09
THUMPD2-208ENST00000530522 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
THUMPD2-208ENST00000530522 PRDM2Q13029 1718 aa28■■■□□ 2.07
THUMPD2-208ENST00000530522 ABCC8Q09428 1581 aa27.92■■■□□ 2.06
THUMPD2-208ENST00000530522 PDS5BQ9NTI5 1447 aa27.91■■■□□ 2.06
THUMPD2-208ENST00000530522 FANCD2Q9BXW9 1451 aa27.91■■■□□ 2.06
THUMPD2-208ENST00000530522 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
THUMPD2-208ENST00000530522 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
THUMPD2-208ENST00000530522 CEP164Q9UPV0 1460 aa27.8■■■□□ 2.04
THUMPD2-208ENST00000530522 KIF21AQ7Z4S6 1674 aa27.73■■■□□ 2.03
THUMPD2-208ENST00000530522 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
THUMPD2-208ENST00000530522 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
THUMPD2-208ENST00000530522 AEBP2Q6ZN18 517 aaPredicted RBP27.67■■■□□ 2.02
THUMPD2-208ENST00000530522 CUX1P39880 1505 aa27.65■■■□□ 2.02
THUMPD2-208ENST00000530522 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
THUMPD2-208ENST00000530522 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
THUMPD2-208ENST00000530522 DNMBPQ6XZF7 1577 aa27.57■■■□□ 2
THUMPD2-208ENST00000530522 MRC2Q9UBG0 1479 aa27.56■■■□□ 2
THUMPD2-208ENST00000530522 URB2Q14146 1524 aaKnown RBP27.55■■■□□ 2
THUMPD2-208ENST00000530522 TOPBP1Q92547 1522 aa27.54■■■□□ 2
THUMPD2-208ENST00000530522 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
THUMPD2-208ENST00000530522 WDR62O43379 1518 aa27.4■■□□□ 1.98
THUMPD2-208ENST00000530522 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.98
THUMPD2-208ENST00000530522 POLA1P09884 1462 aaPredicted RBP27.37■■□□□ 1.97
THUMPD2-208ENST00000530522 FAM9AQ8IZU1 332 aaPredicted RBP27.33■■□□□ 1.97
THUMPD2-208ENST00000530522 SOGA1O94964 1423 aa27.31■■□□□ 1.96
THUMPD2-208ENST00000530522 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
THUMPD2-208ENST00000530522 EEA1Q15075 1411 aa27.21■■□□□ 1.95
THUMPD2-208ENST00000530522 CUX2O14529 1486 aa27.21■■□□□ 1.95
THUMPD2-208ENST00000530522 RUSC2Q8N2Y8 1516 aa27.2■■□□□ 1.95
THUMPD2-208ENST00000530522 KIF27Q86VH2 1401 aa27.19■■□□□ 1.94
THUMPD2-208ENST00000530522 ABCA10Q8WWZ4 1543 aa27.19■■□□□ 1.94
THUMPD2-208ENST00000530522 IFT140Q96RY7 1462 aa27.15■■□□□ 1.94
THUMPD2-208ENST00000530522 TARBP1Q13395 1621 aaKnown RBP27.13■■□□□ 1.93
THUMPD2-208ENST00000530522 CSRNP3Q8WYN3 585 aa27.1■■□□□ 1.93
THUMPD2-208ENST00000530522 WDR97A6NE52 1622 aa27.1■■□□□ 1.93
THUMPD2-208ENST00000530522 TDRD9Q8NDG6 1382 aaKnown RBP27.08■■□□□ 1.92
THUMPD2-208ENST00000530522 GAPVD1Q14C86 1478 aa27■■□□□ 1.91
THUMPD2-208ENST00000530522 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
THUMPD2-208ENST00000530522 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
THUMPD2-208ENST00000530522 EHMT2Q96KQ7 1210 aa26.97■■□□□ 1.91
THUMPD2-208ENST00000530522 AQRO60306 1485 aaKnown RBP eCLIP26.96■■□□□ 1.912e-8■■■■■ 42.3
THUMPD2-208ENST00000530522 IGF1RP08069 1367 aa26.95■■□□□ 1.9
THUMPD2-208ENST00000530522 LOC105371045A0A1W2PR82 267 aa26.94■■□□□ 1.9
THUMPD2-208ENST00000530522 EIF4G3O43432 1585 aaKnown RBP26.89■■□□□ 1.9
THUMPD2-208ENST00000530522 ERICH3Q5RHP9 1530 aa26.88■■□□□ 1.89
THUMPD2-208ENST00000530522 GRIN2BQ13224 1484 aa26.86■■□□□ 1.89
THUMPD2-208ENST00000530522 KIF21BO75037 1637 aa26.84■■□□□ 1.89
THUMPD2-208ENST00000530522 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
THUMPD2-208ENST00000530522 PBRM1Q86U86 1689 aa26.84■■□□□ 1.89
THUMPD2-208ENST00000530522 PRXQ9BXM0 1461 aa26.84■■□□□ 1.89
THUMPD2-208ENST00000530522 GOLGA3Q08378 1498 aa26.81■■□□□ 1.88
THUMPD2-208ENST00000530522 CUL7Q14999 1698 aa26.8■■□□□ 1.88
THUMPD2-208ENST00000530522 RAPGEF2Q9Y4G8 1499 aa26.78■■□□□ 1.88
THUMPD2-208ENST00000530522 UBTFP17480 764 aaKnown RBP26.77■■□□□ 1.88
THUMPD2-208ENST00000530522 SNAPC4Q5SXM2 1469 aa26.72■■□□□ 1.87
THUMPD2-208ENST00000530522 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.86
THUMPD2-208ENST00000530522 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
THUMPD2-208ENST00000530522 ADAMTS12P58397 1594 aa26.68■■□□□ 1.86
THUMPD2-208ENST00000530522 TNIKQ9UKE5 1360 aa26.63■■□□□ 1.85
THUMPD2-208ENST00000530522 CHMP7Q8WUX9 453 aaPredicted RBP26.59■■□□□ 1.85
THUMPD2-208ENST00000530522 FBLN2P98095 1184 aa26.58■■□□□ 1.85
THUMPD2-208ENST00000530522 SYNJ2O15056 1496 aa26.58■■□□□ 1.85
THUMPD2-208ENST00000530522 GRIN2AQ12879 1464 aa26.51■■□□□ 1.83
THUMPD2-208ENST00000530522 RANGAP1P46060 587 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms