RNA–Protein interactions for RNA: ENST00000530457.5

PSMA1-209, Transcript of proteasome subunit alpha 1, humanhuman

TSL 5 BASIC

Gene PSMA1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-209ENST00000530457 NISCHQ9Y2I1 1504 aa40.47■■■■■ 4.07
PSMA1-209ENST00000530457 CCDC180Q9P1Z9 1646 aa35.44■■■■□ 3.26
PSMA1-209ENST00000530457 ZCCHC6Q5VYS8 1495 aaKnown RBP33.98■■■■□ 3.03
PSMA1-209ENST00000530457 ABCC9O60706 1549 aa33.75■■■□□ 2.99
PSMA1-209ENST00000530457 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
PSMA1-209ENST00000530457 DCAF8L2P0C7V8 631 aa33.36■■■□□ 2.93
PSMA1-209ENST00000530457 MYO15BQ96JP2 1530 aa33.13■■■□□ 2.89
PSMA1-209ENST00000530457 NACADO15069 1562 aa32.98■■■□□ 2.87
PSMA1-209ENST00000530457 SHROOM4Q9ULL8 1493 aa32.85■■■□□ 2.85
PSMA1-209ENST00000530457 RB1CC1Q8TDY2 1594 aa32.74■■■□□ 2.83
PSMA1-209ENST00000530457 SCRIBQ14160 1630 aa32.54■■■□□ 2.8
PSMA1-209ENST00000530457 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
PSMA1-209ENST00000530457 BICRAQ9NZM4 1560 aa31.8■■■□□ 2.68
PSMA1-209ENST00000530457 PABPN1Q86U42 306 aaKnown RBP eCLIP31.77■■■□□ 2.68
PSMA1-209ENST00000530457 SUPT5HO00267 1087 aaKnown RBP31.48■■■□□ 2.63
PSMA1-209ENST00000530457 CECR2Q9BXF3 1484 aa31.46■■■□□ 2.63
PSMA1-209ENST00000530457 RSF1Q96T23 1441 aaPredicted RBP31.31■■■□□ 2.6
PSMA1-209ENST00000530457 MROH2BQ7Z745 1585 aa31.28■■■□□ 2.6
PSMA1-209ENST00000530457 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.6
PSMA1-209ENST00000530457 SMARCA4P51532 1647 aa31.19■■■□□ 2.58
PSMA1-209ENST00000530457 WIZO95785 1651 aa31.05■■■□□ 2.56
PSMA1-209ENST00000530457 EIF4G1Q04637 1599 aaKnown RBP30.82■■■□□ 2.52
PSMA1-209ENST00000530457 PEG3Q9GZU2 1588 aa30.8■■■□□ 2.52
PSMA1-209ENST00000530457 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
PSMA1-209ENST00000530457 ATAD2BQ9ULI0 1458 aa30.66■■■□□ 2.5
PSMA1-209ENST00000530457 SMARCA2P51531 1590 aa30.65■■■□□ 2.5
PSMA1-209ENST00000530457 CC2D2AQ9P2K1 1620 aa30.5■■■□□ 2.47
PSMA1-209ENST00000530457 BAZ1BQ9UIG0 1483 aaKnown RBP30.48■■■□□ 2.47
PSMA1-209ENST00000530457 NCAPD3P42695 1498 aa30.4■■■□□ 2.46
PSMA1-209ENST00000530457 HMGXB3Q12766 1538 aa30.4■■■□□ 2.46
PSMA1-209ENST00000530457 CCDC88BA6NC98 1476 aa30.35■■■□□ 2.45
PSMA1-209ENST00000530457 DNAJC5BQ9UF47 199 aa30.28■■■□□ 2.44
PSMA1-209ENST00000530457 CHIC1Q5VXU3 224 aa30.07■■■□□ 2.4
PSMA1-209ENST00000530457 CFTRP13569 1480 aa29.7■■■□□ 2.34
PSMA1-209ENST00000530457 ABCC8Q09428 1581 aa29.69■■■□□ 2.34
PSMA1-209ENST00000530457 PRDM2Q13029 1718 aa29.69■■■□□ 2.34
PSMA1-209ENST00000530457 TRIM41Q8WV44 630 aa29.6■■■□□ 2.33
PSMA1-209ENST00000530457 CADPSQ9ULU8 1353 aa29.59■■■□□ 2.33
PSMA1-209ENST00000530457 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
PSMA1-209ENST00000530457 LAMC3Q9Y6N6 1575 aa29.44■■■□□ 2.3
PSMA1-209ENST00000530457 NESP48681 1621 aa29.44■■■□□ 2.3
PSMA1-209ENST00000530457 SYNJ1O43426 1573 aa29.42■■■□□ 2.3
PSMA1-209ENST00000530457 BIVM-ERCC5R4GMW8 1640 aa29.32■■■□□ 2.28
PSMA1-209ENST00000530457 TOP2BQ02880 1626 aa29.3■■■□□ 2.28
PSMA1-209ENST00000530457 FANCD2Q9BXW9 1451 aa29.3■■■□□ 2.28
PSMA1-209ENST00000530457 PDS5BQ9NTI5 1447 aa29.26■■■□□ 2.27
PSMA1-209ENST00000530457 CUX1P39880 1505 aa29.25■■■□□ 2.27
PSMA1-209ENST00000530457 KIF21AQ7Z4S6 1674 aa29.16■■■□□ 2.26
PSMA1-209ENST00000530457 CEP164Q9UPV0 1460 aa29.14■■■□□ 2.26
PSMA1-209ENST00000530457 FAM9AQ8IZU1 332 aaPredicted RBP29.07■■■□□ 2.24
PSMA1-209ENST00000530457 DNMBPQ6XZF7 1577 aa29.05■■■□□ 2.24
PSMA1-209ENST00000530457 SOGA1O94964 1423 aa29.05■■■□□ 2.24
PSMA1-209ENST00000530457 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
PSMA1-209ENST00000530457 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
PSMA1-209ENST00000530457 RUSC2Q8N2Y8 1516 aa28.98■■■□□ 2.23
PSMA1-209ENST00000530457 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
PSMA1-209ENST00000530457 EEA1Q15075 1411 aa28.95■■■□□ 2.22
PSMA1-209ENST00000530457 FGD5Q6ZNL6 1462 aa28.94■■■□□ 2.22
PSMA1-209ENST00000530457 LOC105371045A0A1W2PR82 267 aa28.9■■■□□ 2.22
PSMA1-209ENST00000530457 MRC2Q9UBG0 1479 aa28.87■■■□□ 2.21
PSMA1-209ENST00000530457 POLA1P09884 1462 aaPredicted RBP28.82■■■□□ 2.2
PSMA1-209ENST00000530457 CSRNP3Q8WYN3 585 aa28.77■■■□□ 2.2
PSMA1-209ENST00000530457 RAD54L2Q9Y4B4 1467 aa28.73■■■□□ 2.19
PSMA1-209ENST00000530457 KIF27Q86VH2 1401 aa28.72■■■□□ 2.19
PSMA1-209ENST00000530457 WDR62O43379 1518 aa28.72■■■□□ 2.19
PSMA1-209ENST00000530457 THOC2Q8NI27 1593 aaKnown RBP28.71■■■□□ 2.19
PSMA1-209ENST00000530457 WDR97A6NE52 1622 aa28.71■■■□□ 2.19
PSMA1-209ENST00000530457 CUX2O14529 1486 aa28.71■■■□□ 2.19
PSMA1-209ENST00000530457 ABCA10Q8WWZ4 1543 aa28.68■■■□□ 2.18
PSMA1-209ENST00000530457 KIF21BO75037 1637 aa28.66■■■□□ 2.18
PSMA1-209ENST00000530457 EHMT2Q96KQ7 1210 aa28.65■■■□□ 2.18
PSMA1-209ENST00000530457 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
PSMA1-209ENST00000530457 GOLGA3Q08378 1498 aa28.57■■■□□ 2.16
PSMA1-209ENST00000530457 ABCA5Q8WWZ7 1642 aa28.52■■■□□ 2.16
PSMA1-209ENST00000530457 PRXQ9BXM0 1461 aa28.52■■■□□ 2.16
PSMA1-209ENST00000530457 RAPGEF2Q9Y4G8 1499 aa28.48■■■□□ 2.15
PSMA1-209ENST00000530457 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
PSMA1-209ENST00000530457 IGF1RP08069 1367 aa28.48■■■□□ 2.15
PSMA1-209ENST00000530457 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
PSMA1-209ENST00000530457 TNIKQ9UKE5 1360 aa28.42■■■□□ 2.14
PSMA1-209ENST00000530457 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
PSMA1-209ENST00000530457 GAPVD1Q14C86 1478 aa28.39■■■□□ 2.13
PSMA1-209ENST00000530457 CUL7Q14999 1698 aa28.36■■■□□ 2.13
PSMA1-209ENST00000530457 PBRM1Q86U86 1689 aa28.36■■■□□ 2.13
PSMA1-209ENST00000530457 UBTFP17480 764 aaKnown RBP28.36■■■□□ 2.13
PSMA1-209ENST00000530457 CARMIL1Q5VZK9 1371 aa28.32■■■□□ 2.12
PSMA1-209ENST00000530457 ZNF608Q9ULD9 1512 aaPredicted RBP28.31■■■□□ 2.12
PSMA1-209ENST00000530457 AQRO60306 1485 aaKnown RBP eCLIP28.29■■■□□ 2.128e-8■■■■□ 20
PSMA1-209ENST00000530457 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
PSMA1-209ENST00000530457 EIF4G3O43432 1585 aaKnown RBP28.26■■■□□ 2.12
PSMA1-209ENST00000530457 GRIN2BQ13224 1484 aa28.2■■■□□ 2.1
PSMA1-209ENST00000530457 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
PSMA1-209ENST00000530457 CLIP1P30622 1438 aa28.08■■■□□ 2.09
PSMA1-209ENST00000530457 CTTNBP2Q8WZ74 1663 aa28.08■■■□□ 2.09
PSMA1-209ENST00000530457 FHAD1B1AJZ9 1412 aa28.07■■■□□ 2.08
PSMA1-209ENST00000530457 SNAPC4Q5SXM2 1469 aa28.05■■■□□ 2.08
PSMA1-209ENST00000530457 MAGI1Q96QZ7 1491 aaPredicted RBP27.98■■■□□ 2.07
PSMA1-209ENST00000530457 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
PSMA1-209ENST00000530457 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.06
PSMA1-209ENST00000530457 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms