RNA–Protein interactions for RNA: ENST00000530105.1

PRG2-203, Transcript of proteoglycan 2, pro eosinophil major basic protein, humanhuman

TSL 5

Gene PRG2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRG2-203ENST00000530105 NISCHQ9Y2I1 1504 aa32.7■■■□□ 2.83
PRG2-203ENST00000530105 ABCC9O60706 1549 aa29.96■■■□□ 2.39
PRG2-203ENST00000530105 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
PRG2-203ENST00000530105 DNAJC5BQ9UF47 199 aa28.45■■■□□ 2.14
PRG2-203ENST00000530105 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
PRG2-203ENST00000530105 NACADO15069 1562 aa28.11■■■□□ 2.09
PRG2-203ENST00000530105 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
PRG2-203ENST00000530105 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
PRG2-203ENST00000530105 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
PRG2-203ENST00000530105 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
PRG2-203ENST00000530105 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
PRG2-203ENST00000530105 SHROOM4Q9ULL8 1493 aa27.26■■□□□ 1.95
PRG2-203ENST00000530105 CC2D2AQ9P2K1 1620 aa27.13■■□□□ 1.93
PRG2-203ENST00000530105 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
PRG2-203ENST00000530105 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
PRG2-203ENST00000530105 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
PRG2-203ENST00000530105 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
PRG2-203ENST00000530105 SCRIBQ14160 1630 aa26.9■■□□□ 1.9
PRG2-203ENST00000530105 AEBP2Q6ZN18 517 aaPredicted RBP26.73■■□□□ 1.87
PRG2-203ENST00000530105 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
PRG2-203ENST00000530105 DNAJC5Q9H3Z4 198 aa26.53■■□□□ 1.84
PRG2-203ENST00000530105 CUX2O14529 1486 aa26.12■■□□□ 1.77
PRG2-203ENST00000530105 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
PRG2-203ENST00000530105 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
PRG2-203ENST00000530105 HMGXB3Q12766 1538 aa25.74■■□□□ 1.71
PRG2-203ENST00000530105 ATAD2BQ9ULI0 1458 aa25.74■■□□□ 1.71
PRG2-203ENST00000530105 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
PRG2-203ENST00000530105 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
PRG2-203ENST00000530105 NESP48681 1621 aa25.61■■□□□ 1.69
PRG2-203ENST00000530105 THOC2Q8NI27 1593 aaKnown RBP25.59■■□□□ 1.69
PRG2-203ENST00000530105 LAMC3Q9Y6N6 1575 aa25.47■■□□□ 1.67
PRG2-203ENST00000530105 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
PRG2-203ENST00000530105 PEG3Q9GZU2 1588 aa25.45■■□□□ 1.66
PRG2-203ENST00000530105 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
PRG2-203ENST00000530105 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.65
PRG2-203ENST00000530105 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
PRG2-203ENST00000530105 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
PRG2-203ENST00000530105 WDR62O43379 1518 aa25.1■■□□□ 1.61
PRG2-203ENST00000530105 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
PRG2-203ENST00000530105 TRIM41Q8WV44 630 aa25.08■■□□□ 1.61
PRG2-203ENST00000530105 CADPSQ9ULU8 1353 aa25.05■■□□□ 1.6
PRG2-203ENST00000530105 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.57
PRG2-203ENST00000530105 WIZO95785 1651 aa24.87■■□□□ 1.57
PRG2-203ENST00000530105 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
PRG2-203ENST00000530105 CFTRP13569 1480 aa24.7■■□□□ 1.55
PRG2-203ENST00000530105 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
PRG2-203ENST00000530105 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
PRG2-203ENST00000530105 PRDM2Q13029 1718 aa24.6■■□□□ 1.53
PRG2-203ENST00000530105 RIMBP3CA6NJZ7 1639 aa24.59■■□□□ 1.53
PRG2-203ENST00000530105 RIMBP3BA6NNM3 1639 aa24.59■■□□□ 1.53
PRG2-203ENST00000530105 RIMBP3Q9UFD9 1639 aa24.59■■□□□ 1.53
PRG2-203ENST00000530105 TOP2AP11388 1531 aaKnown RBP24.55■■□□□ 1.52
PRG2-203ENST00000530105 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
PRG2-203ENST00000530105 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
PRG2-203ENST00000530105 IFT140Q96RY7 1462 aa24.41■■□□□ 1.5
PRG2-203ENST00000530105 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
PRG2-203ENST00000530105 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.48
PRG2-203ENST00000530105 TOPBP1Q92547 1522 aa24.28■■□□□ 1.48
PRG2-203ENST00000530105 CHD1O14646 1710 aa24.24■■□□□ 1.47
PRG2-203ENST00000530105 ABCC8Q09428 1581 aa24.23■■□□□ 1.47
PRG2-203ENST00000530105 DNMBPQ6XZF7 1577 aa24.2■■□□□ 1.46
PRG2-203ENST00000530105 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
PRG2-203ENST00000530105 TARBP1Q13395 1621 aaKnown RBP24.17■■□□□ 1.46
PRG2-203ENST00000530105 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
PRG2-203ENST00000530105 CYB5RLQ6IPT4 315 aa24.11■■□□□ 1.45
PRG2-203ENST00000530105 AQRO60306 1485 aaKnown RBP eCLIP24.06■■□□□ 1.441e-8■■■■□ 24
PRG2-203ENST00000530105 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
PRG2-203ENST00000530105 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
PRG2-203ENST00000530105 WDR97A6NE52 1622 aa23.96■■□□□ 1.43
PRG2-203ENST00000530105 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
PRG2-203ENST00000530105 FBLN2P98095 1184 aa23.9■■□□□ 1.42
PRG2-203ENST00000530105 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
PRG2-203ENST00000530105 SNAPC4Q5SXM2 1469 aa23.86■■□□□ 1.41
PRG2-203ENST00000530105 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
PRG2-203ENST00000530105 SOGA1O94964 1423 aa23.82■■□□□ 1.4
PRG2-203ENST00000530105 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
PRG2-203ENST00000530105 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
PRG2-203ENST00000530105 FGD5Q6ZNL6 1462 aa23.77■■□□□ 1.4
PRG2-203ENST00000530105 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
PRG2-203ENST00000530105 SYNJ2O15056 1496 aa23.72■■□□□ 1.39
PRG2-203ENST00000530105 PBRM1Q86U86 1689 aa23.71■■□□□ 1.39
PRG2-203ENST00000530105 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
PRG2-203ENST00000530105 CUX1P39880 1505 aa23.69■■□□□ 1.38
PRG2-203ENST00000530105 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
PRG2-203ENST00000530105 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.36
PRG2-203ENST00000530105 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
PRG2-203ENST00000530105 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
PRG2-203ENST00000530105 ERCC6L2Q5T890 1561 aa23.46■■□□□ 1.35
PRG2-203ENST00000530105 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
PRG2-203ENST00000530105 ADAMTS12P58397 1594 aa23.42■■□□□ 1.34
PRG2-203ENST00000530105 SHROOM2Q13796 1616 aa23.41■■□□□ 1.34
PRG2-203ENST00000530105 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
PRG2-203ENST00000530105 NUP160Q12769 1436 aa23.38■■□□□ 1.33
PRG2-203ENST00000530105 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
PRG2-203ENST00000530105 BIVM-ERCC5R4GMW8 1640 aa23.27■■□□□ 1.32
PRG2-203ENST00000530105 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
PRG2-203ENST00000530105 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
PRG2-203ENST00000530105 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
PRG2-203ENST00000530105 TOP2BQ02880 1626 aa23.22■■□□□ 1.31
PRG2-203ENST00000530105 PRG4Q92954 1404 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms