RNA–Protein interactions for RNA: ENST00000530011.1

CCDC180-211, Transcript of coiled-coil domain containing 180, humanhuman

TSL 4

Gene CCDC180, Length 562 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-211ENST00000530011 NISCHQ9Y2I1 1504 aa17.31■□□□□ 0.36
CCDC180-211ENST00000530011 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
CCDC180-211ENST00000530011 ABCC9O60706 1549 aa15.73■□□□□ 0.11
CCDC180-211ENST00000530011 CCDC180Q9P1Z9 1646 aa15.44■□□□□ 0.06
CCDC180-211ENST00000530011 CHIC1Q5VXU3 224 aa15.38■□□□□ 0.05
CCDC180-211ENST00000530011 DNAJC5BQ9UF47 199 aa14.99□□□□□ -0.01
CCDC180-211ENST00000530011 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
CCDC180-211ENST00000530011 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
CCDC180-211ENST00000530011 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
CCDC180-211ENST00000530011 NACADO15069 1562 aa14.68□□□□□ -0.06
CCDC180-211ENST00000530011 UNC13AQ9UPW8 1703 aa14.47□□□□□ -0.09
CCDC180-211ENST00000530011 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
CCDC180-211ENST00000530011 BICRAQ9NZM4 1560 aa14.42□□□□□ -0.1
CCDC180-211ENST00000530011 ZCCHC6Q5VYS8 1495 aaKnown RBP14.4□□□□□ -0.1
CCDC180-211ENST00000530011 DCAF1Q9Y4B6 1507 aa14.38□□□□□ -0.11
CCDC180-211ENST00000530011 CECR2Q9BXF3 1484 aa14.17□□□□□ -0.14
CCDC180-211ENST00000530011 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
CCDC180-211ENST00000530011 SHROOM4Q9ULL8 1493 aa14.13□□□□□ -0.15
CCDC180-211ENST00000530011 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
CCDC180-211ENST00000530011 EIF4G1Q04637 1599 aaKnown RBP14.07□□□□□ -0.16
CCDC180-211ENST00000530011 DNAJC5Q9H3Z4 198 aa13.84□□□□□ -0.19
CCDC180-211ENST00000530011 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
CCDC180-211ENST00000530011 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
CCDC180-211ENST00000530011 CUX2O14529 1486 aa13.55□□□□□ -0.24
CCDC180-211ENST00000530011 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
CCDC180-211ENST00000530011 PHF23Q9BUL5 403 aaPredicted RBP13.52□□□□□ -0.25
CCDC180-211ENST00000530011 NESP48681 1621 aa13.46□□□□□ -0.25
CCDC180-211ENST00000530011 BAZ1AQ9NRL2 1556 aaPredicted RBP13.46□□□□□ -0.25
CCDC180-211ENST00000530011 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
CCDC180-211ENST00000530011 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
CCDC180-211ENST00000530011 HMGXB3Q12766 1538 aa13.42□□□□□ -0.26
CCDC180-211ENST00000530011 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
CCDC180-211ENST00000530011 BAZ1BQ9UIG0 1483 aaKnown RBP13.38□□□□□ -0.27
CCDC180-211ENST00000530011 MROH2BQ7Z745 1585 aa13.29□□□□□ -0.28
CCDC180-211ENST00000530011 PEG3Q9GZU2 1588 aa13.29□□□□□ -0.28
CCDC180-211ENST00000530011 THOC2Q8NI27 1593 aaKnown RBP13.28□□□□□ -0.28
CCDC180-211ENST00000530011 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
CCDC180-211ENST00000530011 PDS5BQ9NTI5 1447 aa13.26□□□□□ -0.29
CCDC180-211ENST00000530011 RSF1Q96T23 1441 aaPredicted RBP13.23□□□□□ -0.29
CCDC180-211ENST00000530011 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.29
CCDC180-211ENST00000530011 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
CCDC180-211ENST00000530011 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
CCDC180-211ENST00000530011 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
CCDC180-211ENST00000530011 WIZO95785 1651 aa13.12□□□□□ -0.31
CCDC180-211ENST00000530011 SUPT5HO00267 1087 aaKnown RBP13.1□□□□□ -0.31
CCDC180-211ENST00000530011 WDR62O43379 1518 aa13.07□□□□□ -0.32
CCDC180-211ENST00000530011 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
CCDC180-211ENST00000530011 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
CCDC180-211ENST00000530011 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
CCDC180-211ENST00000530011 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
CCDC180-211ENST00000530011 CFTRP13569 1480 aa12.99□□□□□ -0.33
CCDC180-211ENST00000530011 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
CCDC180-211ENST00000530011 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
CCDC180-211ENST00000530011 ZNF608Q9ULD9 1512 aaPredicted RBP12.83□□□□□ -0.36
CCDC180-211ENST00000530011 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
CCDC180-211ENST00000530011 RIMBP3CA6NJZ7 1639 aa12.77□□□□□ -0.36
CCDC180-211ENST00000530011 RIMBP3BA6NNM3 1639 aa12.77□□□□□ -0.36
CCDC180-211ENST00000530011 RIMBP3Q9UFD9 1639 aa12.77□□□□□ -0.36
CCDC180-211ENST00000530011 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
CCDC180-211ENST00000530011 ABCC8Q09428 1581 aa12.75□□□□□ -0.37
CCDC180-211ENST00000530011 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
CCDC180-211ENST00000530011 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
CCDC180-211ENST00000530011 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
CCDC180-211ENST00000530011 FBLN2P98095 1184 aa12.72□□□□□ -0.37
CCDC180-211ENST00000530011 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC180-211ENST00000530011 EIF4G3O43432 1585 aaKnown RBP12.67□□□□□ -0.38
CCDC180-211ENST00000530011 DNMBPQ6XZF7 1577 aa12.67□□□□□ -0.38
CCDC180-211ENST00000530011 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
CCDC180-211ENST00000530011 TARBP1Q13395 1621 aaKnown RBP12.64□□□□□ -0.39
CCDC180-211ENST00000530011 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
CCDC180-211ENST00000530011 POLA1P09884 1462 aaPredicted RBP12.62□□□□□ -0.39
CCDC180-211ENST00000530011 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
CCDC180-211ENST00000530011 CHD1O14646 1710 aa12.61□□□□□ -0.39
CCDC180-211ENST00000530011 SOGA1O94964 1423 aa12.61□□□□□ -0.39
CCDC180-211ENST00000530011 ARAP1Q96P48 1450 aa12.59□□□□□ -0.39
CCDC180-211ENST00000530011 CHMP7Q8WUX9 453 aaPredicted RBP12.57□□□□□ -0.4
CCDC180-211ENST00000530011 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
CCDC180-211ENST00000530011 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
CCDC180-211ENST00000530011 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
CCDC180-211ENST00000530011 CUX1P39880 1505 aa12.48□□□□□ -0.41
CCDC180-211ENST00000530011 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
CCDC180-211ENST00000530011 GRIN2BQ13224 1484 aa12.47□□□□□ -0.41
CCDC180-211ENST00000530011 PLPPR3Q6T4P5 718 aa12.47□□□□□ -0.41
CCDC180-211ENST00000530011 MAGI1Q96QZ7 1491 aaPredicted RBP12.46□□□□□ -0.42
CCDC180-211ENST00000530011 SYNJ1O43426 1573 aa12.45□□□□□ -0.42
CCDC180-211ENST00000530011 FOXD1Q16676 465 aa12.45□□□□□ -0.42
CCDC180-211ENST00000530011 SYNJ2O15056 1496 aa12.44□□□□□ -0.42
CCDC180-211ENST00000530011 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
CCDC180-211ENST00000530011 GAPVD1Q14C86 1478 aa12.42□□□□□ -0.42
CCDC180-211ENST00000530011 TOP2BQ02880 1626 aa12.41□□□□□ -0.42
CCDC180-211ENST00000530011 BIVM-ERCC5R4GMW8 1640 aa12.37□□□□□ -0.43
CCDC180-211ENST00000530011 ABCA10Q8WWZ4 1543 aa12.36□□□□□ -0.43
CCDC180-211ENST00000530011 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
CCDC180-211ENST00000530011 KIF27Q86VH2 1401 aa12.35□□□□□ -0.43
CCDC180-211ENST00000530011 ABCA5Q8WWZ7 1642 aa12.32□□□□□ -0.44
CCDC180-211ENST00000530011 ERCC6L2Q5T890 1561 aa12.31□□□□□ -0.44
CCDC180-211ENST00000530011 GRIN2AQ12879 1464 aa12.3□□□□□ -0.44
CCDC180-211ENST00000530011 NUP160Q12769 1436 aa12.27□□□□□ -0.45
CCDC180-211ENST00000530011 CEP170Q5SW79 1584 aa12.26□□□□□ -0.45
CCDC180-211ENST00000530011 FHAD1B1AJZ9 1412 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms