RNA–Protein interactions for RNA: ENST00000529974.1

CTSC-206, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-206ENST00000529974 NISCHQ9Y2I1 1504 aa27.93■■■□□ 2.06
CTSC-206ENST00000529974 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
CTSC-206ENST00000529974 ABCC9O60706 1549 aa24.72■■□□□ 1.55
CTSC-206ENST00000529974 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
CTSC-206ENST00000529974 NACADO15069 1562 aa23.55■■□□□ 1.36
CTSC-206ENST00000529974 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.32
CTSC-206ENST00000529974 DCAF8L2P0C7V8 631 aa23.25■■□□□ 1.31
CTSC-206ENST00000529974 ZCCHC6Q5VYS8 1495 aaKnown RBP23.24■■□□□ 1.31
CTSC-206ENST00000529974 UNC13AQ9UPW8 1703 aa23.24■■□□□ 1.31
CTSC-206ENST00000529974 DCAF1Q9Y4B6 1507 aa23.12■■□□□ 1.29
CTSC-206ENST00000529974 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
CTSC-206ENST00000529974 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.27
CTSC-206ENST00000529974 DNAJC5BQ9UF47 199 aa22.95■■□□□ 1.26
CTSC-206ENST00000529974 SCRIBQ14160 1630 aa22.8■■□□□ 1.24
CTSC-206ENST00000529974 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
CTSC-206ENST00000529974 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
CTSC-206ENST00000529974 CC2D2AQ9P2K1 1620 aa22.39■■□□□ 1.18
CTSC-206ENST00000529974 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
CTSC-206ENST00000529974 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
CTSC-206ENST00000529974 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
CTSC-206ENST00000529974 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
CTSC-206ENST00000529974 BAZ1AQ9NRL2 1556 aaPredicted RBP21.67■■□□□ 1.06
CTSC-206ENST00000529974 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
CTSC-206ENST00000529974 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
CTSC-206ENST00000529974 PEG3Q9GZU2 1588 aa21.59■■□□□ 1.05
CTSC-206ENST00000529974 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
CTSC-206ENST00000529974 BAZ1BQ9UIG0 1483 aaKnown RBP21.49■■□□□ 1.03
CTSC-206ENST00000529974 NESP48681 1621 aa21.33■■□□□ 1.01
CTSC-206ENST00000529974 ERCC6Q03468 1493 aa21.3■■□□□ 1
CTSC-206ENST00000529974 WIZO95785 1651 aa21.3■■□□□ 1
CTSC-206ENST00000529974 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
CTSC-206ENST00000529974 CUX2O14529 1486 aa21.23■□□□□ 0.99
CTSC-206ENST00000529974 THOC2Q8NI27 1593 aaKnown RBP21.15■□□□□ 0.98
CTSC-206ENST00000529974 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
CTSC-206ENST00000529974 KIF21AQ7Z4S6 1674 aa21.13■□□□□ 0.97
CTSC-206ENST00000529974 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
CTSC-206ENST00000529974 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
CTSC-206ENST00000529974 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
CTSC-206ENST00000529974 CFTRP13569 1480 aa20.88■□□□□ 0.93
CTSC-206ENST00000529974 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
CTSC-206ENST00000529974 WDR62O43379 1518 aa20.88■□□□□ 0.93
CTSC-206ENST00000529974 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
CTSC-206ENST00000529974 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
CTSC-206ENST00000529974 FANCD2Q9BXW9 1451 aa20.83■□□□□ 0.93
CTSC-206ENST00000529974 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
CTSC-206ENST00000529974 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
CTSC-206ENST00000529974 URB2Q14146 1524 aaKnown RBP20.69■□□□□ 0.9
CTSC-206ENST00000529974 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
CTSC-206ENST00000529974 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
CTSC-206ENST00000529974 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
CTSC-206ENST00000529974 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
CTSC-206ENST00000529974 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
CTSC-206ENST00000529974 TARBP1Q13395 1621 aaKnown RBP20.34■□□□□ 0.85
CTSC-206ENST00000529974 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
CTSC-206ENST00000529974 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
CTSC-206ENST00000529974 CUX1P39880 1505 aa20.23■□□□□ 0.83
CTSC-206ENST00000529974 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
CTSC-206ENST00000529974 FGD5Q6ZNL6 1462 aa20.19■□□□□ 0.82
CTSC-206ENST00000529974 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
CTSC-206ENST00000529974 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.825e-7■■■■■ 34.1
CTSC-206ENST00000529974 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
CTSC-206ENST00000529974 CHD1O14646 1710 aa20.14■□□□□ 0.81
CTSC-206ENST00000529974 WDR97A6NE52 1622 aa20.14■□□□□ 0.81
CTSC-206ENST00000529974 SOGA1O94964 1423 aa20.11■□□□□ 0.81
CTSC-206ENST00000529974 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
CTSC-206ENST00000529974 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
CTSC-206ENST00000529974 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
CTSC-206ENST00000529974 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
CTSC-206ENST00000529974 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
CTSC-206ENST00000529974 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
CTSC-206ENST00000529974 BIVM-ERCC5R4GMW8 1640 aa20.01■□□□□ 0.79
CTSC-206ENST00000529974 PBRM1Q86U86 1689 aa20■□□□□ 0.79
CTSC-206ENST00000529974 ABCA5Q8WWZ7 1642 aa19.99■□□□□ 0.79
CTSC-206ENST00000529974 ARHGEF11O15085 1522 aa19.99■□□□□ 0.79
CTSC-206ENST00000529974 ABCA10Q8WWZ4 1543 aa19.98■□□□□ 0.79
CTSC-206ENST00000529974 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
CTSC-206ENST00000529974 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
CTSC-206ENST00000529974 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
CTSC-206ENST00000529974 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
CTSC-206ENST00000529974 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
CTSC-206ENST00000529974 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
CTSC-206ENST00000529974 CLASP1Q7Z460 1538 aa19.92■□□□□ 0.78
CTSC-206ENST00000529974 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
CTSC-206ENST00000529974 FBLN2P98095 1184 aa19.88■□□□□ 0.77
CTSC-206ENST00000529974 ARAP1Q96P48 1450 aa19.83■□□□□ 0.76
CTSC-206ENST00000529974 ADAMTS12P58397 1594 aa19.83■□□□□ 0.76
CTSC-206ENST00000529974 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
CTSC-206ENST00000529974 GRIN2AQ12879 1464 aa19.74■□□□□ 0.75
CTSC-206ENST00000529974 ERICH3Q5RHP9 1530 aa19.73■□□□□ 0.75
CTSC-206ENST00000529974 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
CTSC-206ENST00000529974 CYB5RLQ6IPT4 315 aa19.68■□□□□ 0.74
CTSC-206ENST00000529974 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
CTSC-206ENST00000529974 NUP160Q12769 1436 aa19.68■□□□□ 0.74
CTSC-206ENST00000529974 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
CTSC-206ENST00000529974 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
CTSC-206ENST00000529974 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
CTSC-206ENST00000529974 CUL7Q14999 1698 aa19.52■□□□□ 0.71
CTSC-206ENST00000529974 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
CTSC-206ENST00000529974 IGF1RP08069 1367 aa19.46■□□□□ 0.71
CTSC-206ENST00000529974 PRG4Q92954 1404 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms