RNA–Protein interactions for RNA: ENST00000529947.1

UBTF-210, Transcript of upstream binding transcription factor, humanhuman

TSL 3

Gene UBTF, Length 685 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-210ENST00000529947 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
UBTF-210ENST00000529947 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
UBTF-210ENST00000529947 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
UBTF-210ENST00000529947 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
UBTF-210ENST00000529947 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
UBTF-210ENST00000529947 CCDC180Q9P1Z9 1646 aa16.17■□□□□ 0.18
UBTF-210ENST00000529947 ABCC9O60706 1549 aa15.89■□□□□ 0.13
UBTF-210ENST00000529947 FOXD1Q16676 465 aa15.77■□□□□ 0.12
UBTF-210ENST00000529947 ZCCHC6Q5VYS8 1495 aaKnown RBP15.62■□□□□ 0.09
UBTF-210ENST00000529947 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
UBTF-210ENST00000529947 DCAF8L2P0C7V8 631 aa15.48■□□□□ 0.07
UBTF-210ENST00000529947 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.06
UBTF-210ENST00000529947 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
UBTF-210ENST00000529947 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
UBTF-210ENST00000529947 NACADO15069 1562 aa15.19■□□□□ 0.02
UBTF-210ENST00000529947 SUPT5HO00267 1087 aaKnown RBP15.16■□□□□ 0.02
UBTF-210ENST00000529947 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
UBTF-210ENST00000529947 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
UBTF-210ENST00000529947 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
UBTF-210ENST00000529947 ADRA2BP18089 450 aa14.95□□□□□ -0.02
UBTF-210ENST00000529947 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
UBTF-210ENST00000529947 PIAS4Q8N2W9 510 aaPredicted RBP14.8□□□□□ -0.04
UBTF-210ENST00000529947 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
UBTF-210ENST00000529947 DNAJC5BQ9UF47 199 aa14.74□□□□□ -0.05
UBTF-210ENST00000529947 SCRIBQ14160 1630 aa14.72□□□□□ -0.05
UBTF-210ENST00000529947 MSH5O43196 834 aa14.65□□□□□ -0.06
UBTF-210ENST00000529947 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.07
UBTF-210ENST00000529947 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
UBTF-210ENST00000529947 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
UBTF-210ENST00000529947 CECR2Q9BXF3 1484 aa14.39□□□□□ -0.11
UBTF-210ENST00000529947 MROH2BQ7Z745 1585 aa14.33□□□□□ -0.12
UBTF-210ENST00000529947 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
UBTF-210ENST00000529947 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
UBTF-210ENST00000529947 WIZO95785 1651 aa14.17□□□□□ -0.14
UBTF-210ENST00000529947 SMARCA4P51532 1647 aa14.13□□□□□ -0.15
UBTF-210ENST00000529947 LOC105371045A0A1W2PR82 267 aa14.13□□□□□ -0.15
UBTF-210ENST00000529947 TOP2AP11388 1531 aaKnown RBP14.1□□□□□ -0.15
UBTF-210ENST00000529947 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
UBTF-210ENST00000529947 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
UBTF-210ENST00000529947 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
UBTF-210ENST00000529947 FAM9AQ8IZU1 332 aaPredicted RBP13.98□□□□□ -0.17
UBTF-210ENST00000529947 SMARCA2P51531 1590 aa13.97□□□□□ -0.17
UBTF-210ENST00000529947 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.18
UBTF-210ENST00000529947 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
UBTF-210ENST00000529947 PCGF6Q9BYE7 350 aa13.88□□□□□ -0.19
UBTF-210ENST00000529947 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
UBTF-210ENST00000529947 TRIM26Q12899 539 aaPredicted RBP13.84□□□□□ -0.19
UBTF-210ENST00000529947 EEA1Q15075 1411 aa13.78□□□□□ -0.2
UBTF-210ENST00000529947 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
UBTF-210ENST00000529947 HRCP23327 699 aa13.75□□□□□ -0.21
UBTF-210ENST00000529947 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
UBTF-210ENST00000529947 NESP48681 1621 aa13.75□□□□□ -0.21
UBTF-210ENST00000529947 EHMT2Q96KQ7 1210 aa13.74□□□□□ -0.21
UBTF-210ENST00000529947 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
UBTF-210ENST00000529947 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
UBTF-210ENST00000529947 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
UBTF-210ENST00000529947 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
UBTF-210ENST00000529947 LAMC3Q9Y6N6 1575 aa13.67□□□□□ -0.22
UBTF-210ENST00000529947 POTEDQ86YR6 584 aa13.67□□□□□ -0.22
UBTF-210ENST00000529947 SOGA1O94964 1423 aa13.65□□□□□ -0.22
UBTF-210ENST00000529947 TNIKQ9UKE5 1360 aa13.63□□□□□ -0.23
UBTF-210ENST00000529947 UBTFP17480 764 aaKnown RBP13.63□□□□□ -0.23
UBTF-210ENST00000529947 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
UBTF-210ENST00000529947 MAPK8IP2Q13387 824 aaPredicted RBP13.62□□□□□ -0.23
UBTF-210ENST00000529947 CUX2O14529 1486 aa13.61□□□□□ -0.23
UBTF-210ENST00000529947 THOC2Q8NI27 1593 aaKnown RBP13.6□□□□□ -0.23
UBTF-210ENST00000529947 ZEB1P37275 1124 aaPredicted RBP13.57□□□□□ -0.24
UBTF-210ENST00000529947 CADPSQ9ULU8 1353 aa13.57□□□□□ -0.24
UBTF-210ENST00000529947 GOLGA3Q08378 1498 aa13.55□□□□□ -0.24
UBTF-210ENST00000529947 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
UBTF-210ENST00000529947 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
UBTF-210ENST00000529947 CFTRP13569 1480 aa13.53□□□□□ -0.24
UBTF-210ENST00000529947 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
UBTF-210ENST00000529947 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.25
UBTF-210ENST00000529947 SYNJ1O43426 1573 aa13.52□□□□□ -0.25
UBTF-210ENST00000529947 CEP162Q5TB80 1403 aa13.51□□□□□ -0.25
UBTF-210ENST00000529947 TOP2BQ02880 1626 aa13.48□□□□□ -0.25
UBTF-210ENST00000529947 PRDM2Q13029 1718 aa13.46□□□□□ -0.25
UBTF-210ENST00000529947 MRC2Q9UBG0 1479 aa13.44□□□□□ -0.26
UBTF-210ENST00000529947 FANCD2Q9BXW9 1451 aa13.43□□□□□ -0.26
UBTF-210ENST00000529947 WDR62O43379 1518 aa13.43□□□□□ -0.26
UBTF-210ENST00000529947 KIF21BO75037 1637 aa13.42□□□□□ -0.26
UBTF-210ENST00000529947 PPARGC1BQ86YN6 1023 aaKnown RBP13.42□□□□□ -0.26
UBTF-210ENST00000529947 KIF27Q86VH2 1401 aa13.41□□□□□ -0.26
UBTF-210ENST00000529947 BIVM-ERCC5R4GMW8 1640 aa13.41□□□□□ -0.26
UBTF-210ENST00000529947 APLP2Q06481 763 aa13.4□□□□□ -0.26
UBTF-210ENST00000529947 CNKSR2Q8WXI2 1034 aa13.38□□□□□ -0.27
UBTF-210ENST00000529947 CLIP1P30622 1438 aa13.38□□□□□ -0.27
UBTF-210ENST00000529947 DNAJC5Q9H3Z4 198 aa13.37□□□□□ -0.27
UBTF-210ENST00000529947 CUX1P39880 1505 aa13.37□□□□□ -0.27
UBTF-210ENST00000529947 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
UBTF-210ENST00000529947 PRXQ9BXM0 1461 aa13.33□□□□□ -0.28
UBTF-210ENST00000529947 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
UBTF-210ENST00000529947 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
UBTF-210ENST00000529947 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
UBTF-210ENST00000529947 VPS8Q8N3P4 1428 aa13.28□□□□□ -0.28
UBTF-210ENST00000529947 IGF1RP08069 1367 aa13.26□□□□□ -0.29
UBTF-210ENST00000529947 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
UBTF-210ENST00000529947 CCER1Q8TC90 406 aaPredicted RBP13.25□□□□□ -0.29
UBTF-210ENST00000529947 TTBK1Q5TCY1 1321 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms