RNA–Protein interactions for RNA: ENST00000529944.1

PGAP2-233, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 4

Gene PGAP2, Length 539 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-233ENST00000529944 NISCHQ9Y2I1 1504 aa35.66■■■■□ 3.3
PGAP2-233ENST00000529944 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
PGAP2-233ENST00000529944 ABCC9O60706 1549 aa31.79■■■□□ 2.68
PGAP2-233ENST00000529944 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
PGAP2-233ENST00000529944 NACADO15069 1562 aa30.23■■■□□ 2.43
PGAP2-233ENST00000529944 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
PGAP2-233ENST00000529944 UNC13AQ9UPW8 1703 aa29.86■■■□□ 2.37
PGAP2-233ENST00000529944 MYO15BQ96JP2 1530 aa29.84■■■□□ 2.37
PGAP2-233ENST00000529944 ZCCHC6Q5VYS8 1495 aaKnown RBP29.6■■■□□ 2.33
PGAP2-233ENST00000529944 DNAJC5BQ9UF47 199 aa29.59■■■□□ 2.33
PGAP2-233ENST00000529944 DCAF1Q9Y4B6 1507 aa29.51■■■□□ 2.32
PGAP2-233ENST00000529944 PABPN1Q86U42 306 aaKnown RBP eCLIP29.51■■■□□ 2.31
PGAP2-233ENST00000529944 BICRAQ9NZM4 1560 aa29.5■■■□□ 2.31
PGAP2-233ENST00000529944 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
PGAP2-233ENST00000529944 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
PGAP2-233ENST00000529944 CC2D2AQ9P2K1 1620 aa28.8■■■□□ 2.2
PGAP2-233ENST00000529944 EIF4G1Q04637 1599 aaKnown RBP28.76■■■□□ 2.19
PGAP2-233ENST00000529944 CECR2Q9BXF3 1484 aa28.64■■■□□ 2.17
PGAP2-233ENST00000529944 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
PGAP2-233ENST00000529944 NCAPD3P42695 1498 aa27.83■■■□□ 2.04
PGAP2-233ENST00000529944 SMARCA2P51531 1590 aa27.77■■■□□ 2.04
PGAP2-233ENST00000529944 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.03
PGAP2-233ENST00000529944 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
PGAP2-233ENST00000529944 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
PGAP2-233ENST00000529944 PEG3Q9GZU2 1588 aa27.59■■■□□ 2.01
PGAP2-233ENST00000529944 BAZ1BQ9UIG0 1483 aaKnown RBP27.53■■■□□ 2
PGAP2-233ENST00000529944 ERCC6Q03468 1493 aa27.47■■□□□ 1.99
PGAP2-233ENST00000529944 MROH2BQ7Z745 1585 aa27.45■■□□□ 1.99
PGAP2-233ENST00000529944 CUX2O14529 1486 aa27.4■■□□□ 1.98
PGAP2-233ENST00000529944 NESP48681 1621 aa27.34■■□□□ 1.97
PGAP2-233ENST00000529944 LAMC3Q9Y6N6 1575 aa27.27■■□□□ 1.96
PGAP2-233ENST00000529944 WIZO95785 1651 aa27.2■■□□□ 1.94
PGAP2-233ENST00000529944 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
PGAP2-233ENST00000529944 THOC2Q8NI27 1593 aaKnown RBP27.15■■□□□ 1.94
PGAP2-233ENST00000529944 DNAJC5Q9H3Z4 198 aa27.14■■□□□ 1.94
PGAP2-233ENST00000529944 PDS5BQ9NTI5 1447 aa27.03■■□□□ 1.92
PGAP2-233ENST00000529944 CADPSQ9ULU8 1353 aa26.96■■□□□ 1.91
PGAP2-233ENST00000529944 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
PGAP2-233ENST00000529944 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
PGAP2-233ENST00000529944 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
PGAP2-233ENST00000529944 WDR62O43379 1518 aa26.78■■□□□ 1.88
PGAP2-233ENST00000529944 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
PGAP2-233ENST00000529944 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
PGAP2-233ENST00000529944 CFTRP13569 1480 aa26.72■■□□□ 1.87
PGAP2-233ENST00000529944 FANCD2Q9BXW9 1451 aa26.69■■□□□ 1.86
PGAP2-233ENST00000529944 CCDC88BA6NC98 1476 aa26.48■■□□□ 1.83
PGAP2-233ENST00000529944 URB2Q14146 1524 aaKnown RBP26.46■■□□□ 1.83
PGAP2-233ENST00000529944 TOPBP1Q92547 1522 aa26.22■■□□□ 1.79
PGAP2-233ENST00000529944 ABCC8Q09428 1581 aa26.2■■□□□ 1.78
PGAP2-233ENST00000529944 IFT140Q96RY7 1462 aa26.18■■□□□ 1.78
PGAP2-233ENST00000529944 DNMBPQ6XZF7 1577 aa26.18■■□□□ 1.78
PGAP2-233ENST00000529944 ZNF608Q9ULD9 1512 aaPredicted RBP26.09■■□□□ 1.77
PGAP2-233ENST00000529944 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
PGAP2-233ENST00000529944 OSCARQ8IYS5 282 aa26.07■■□□□ 1.76
PGAP2-233ENST00000529944 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
PGAP2-233ENST00000529944 TRIM41Q8WV44 630 aa25.98■■□□□ 1.75
PGAP2-233ENST00000529944 POLA1P09884 1462 aaPredicted RBP25.95■■□□□ 1.74
PGAP2-233ENST00000529944 CHD1O14646 1710 aa25.91■■□□□ 1.74
PGAP2-233ENST00000529944 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
PGAP2-233ENST00000529944 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
PGAP2-233ENST00000529944 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
PGAP2-233ENST00000529944 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
PGAP2-233ENST00000529944 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
PGAP2-233ENST00000529944 CUX1P39880 1505 aa25.81■■□□□ 1.72
PGAP2-233ENST00000529944 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
PGAP2-233ENST00000529944 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
PGAP2-233ENST00000529944 SOGA1O94964 1423 aa25.79■■□□□ 1.72
PGAP2-233ENST00000529944 ARHGEF11O15085 1522 aa25.74■■□□□ 1.71
PGAP2-233ENST00000529944 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
PGAP2-233ENST00000529944 TDRD9Q8NDG6 1382 aaKnown RBP25.69■■□□□ 1.7
PGAP2-233ENST00000529944 PBRM1Q86U86 1689 aa25.65■■□□□ 1.7
PGAP2-233ENST00000529944 SNAPC4Q5SXM2 1469 aa25.64■■□□□ 1.69
PGAP2-233ENST00000529944 FBLN2P98095 1184 aa25.62■■□□□ 1.69
PGAP2-233ENST00000529944 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
PGAP2-233ENST00000529944 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
PGAP2-233ENST00000529944 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
PGAP2-233ENST00000529944 SYNJ1O43426 1573 aa25.54■■□□□ 1.68
PGAP2-233ENST00000529944 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
PGAP2-233ENST00000529944 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
PGAP2-233ENST00000529944 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
PGAP2-233ENST00000529944 SYNJ2O15056 1496 aa25.51■■□□□ 1.67
PGAP2-233ENST00000529944 GAPVD1Q14C86 1478 aa25.51■■□□□ 1.67
PGAP2-233ENST00000529944 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
PGAP2-233ENST00000529944 ARAP1Q96P48 1450 aa25.47■■□□□ 1.67
PGAP2-233ENST00000529944 CHMP7Q8WUX9 453 aaPredicted RBP25.46■■□□□ 1.67
PGAP2-233ENST00000529944 CYB5RLQ6IPT4 315 aa25.43■■□□□ 1.66
PGAP2-233ENST00000529944 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
PGAP2-233ENST00000529944 ADAMTS12P58397 1594 aa25.34■■□□□ 1.65
PGAP2-233ENST00000529944 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
PGAP2-233ENST00000529944 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
PGAP2-233ENST00000529944 CEP170Q5SW79 1584 aa25.2■■□□□ 1.62
PGAP2-233ENST00000529944 FHAD1B1AJZ9 1412 aa25.19■■□□□ 1.62
PGAP2-233ENST00000529944 NUP160Q12769 1436 aa25.17■■□□□ 1.62
PGAP2-233ENST00000529944 SHROOM2Q13796 1616 aa25.14■■□□□ 1.61
PGAP2-233ENST00000529944 TRHP20396 242 aaPredicted RBP25.11■■□□□ 1.61
PGAP2-233ENST00000529944 ERCC6L2Q5T890 1561 aa25.09■■□□□ 1.61
PGAP2-233ENST00000529944 RUSC2Q8N2Y8 1516 aa24.99■■□□□ 1.59
PGAP2-233ENST00000529944 CUL7Q14999 1698 aa24.97■■□□□ 1.59
PGAP2-233ENST00000529944 KIF27Q86VH2 1401 aa24.91■■□□□ 1.58
PGAP2-233ENST00000529944 PRG4Q92954 1404 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms