RNA–Protein interactions for RNA: ENST00000529612.5

CTSH-209, Transcript of cathepsin H, humanhuman

TSL 4

Gene CTSH, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSH-209ENST00000529612 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
CTSH-209ENST00000529612 ABCC9O60706 1549 aa29.07■■■□□ 2.24
CTSH-209ENST00000529612 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
CTSH-209ENST00000529612 RB1CC1Q8TDY2 1594 aa27.62■■■□□ 2.01
CTSH-209ENST00000529612 DNAJC5BQ9UF47 199 aa27.5■■□□□ 1.99
CTSH-209ENST00000529612 NACADO15069 1562 aa27.39■■□□□ 1.97
CTSH-209ENST00000529612 UNC13AQ9UPW8 1703 aa27.15■■□□□ 1.94
CTSH-209ENST00000529612 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
CTSH-209ENST00000529612 PABPN1Q86U42 306 aaKnown RBP eCLIP26.94■■□□□ 1.9
CTSH-209ENST00000529612 BICRAQ9NZM4 1560 aa26.93■■□□□ 1.9
CTSH-209ENST00000529612 DCAF8L2P0C7V8 631 aa26.87■■□□□ 1.89
CTSH-209ENST00000529612 ZCCHC6Q5VYS8 1495 aaKnown RBP26.59■■□□□ 1.85
CTSH-209ENST00000529612 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
CTSH-209ENST00000529612 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
CTSH-209ENST00000529612 CC2D2AQ9P2K1 1620 aa26.33■■□□□ 1.81
CTSH-209ENST00000529612 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
CTSH-209ENST00000529612 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
CTSH-209ENST00000529612 EIF4G1Q04637 1599 aaKnown RBP26.23■■□□□ 1.79
CTSH-209ENST00000529612 DNAJC5Q9H3Z4 198 aa25.39■■□□□ 1.66
CTSH-209ENST00000529612 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
CTSH-209ENST00000529612 CUX2O14529 1486 aa25.21■■□□□ 1.63
CTSH-209ENST00000529612 ATAD2BQ9ULI0 1458 aa25.16■■□□□ 1.62
CTSH-209ENST00000529612 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
CTSH-209ENST00000529612 SMARCA4P51532 1647 aa25.12■■□□□ 1.61
CTSH-209ENST00000529612 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
CTSH-209ENST00000529612 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
CTSH-209ENST00000529612 NESP48681 1621 aa24.95■■□□□ 1.58
CTSH-209ENST00000529612 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
CTSH-209ENST00000529612 BAZ1AQ9NRL2 1556 aaPredicted RBP24.92■■□□□ 1.58
CTSH-209ENST00000529612 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
CTSH-209ENST00000529612 THOC2Q8NI27 1593 aaKnown RBP24.85■■□□□ 1.57
CTSH-209ENST00000529612 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
CTSH-209ENST00000529612 MROH2BQ7Z745 1585 aa24.73■■□□□ 1.55
CTSH-209ENST00000529612 KIF21AQ7Z4S6 1674 aa24.7■■□□□ 1.54
CTSH-209ENST00000529612 PDS5BQ9NTI5 1447 aa24.52■■□□□ 1.52
CTSH-209ENST00000529612 CADPSQ9ULU8 1353 aa24.44■■□□□ 1.5
CTSH-209ENST00000529612 WIZO95785 1651 aa24.43■■□□□ 1.5
CTSH-209ENST00000529612 WDR62O43379 1518 aa24.41■■□□□ 1.5
CTSH-209ENST00000529612 MRC2Q9UBG0 1479 aa24.4■■□□□ 1.5
CTSH-209ENST00000529612 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
CTSH-209ENST00000529612 CFTRP13569 1480 aa24.18■■□□□ 1.46
CTSH-209ENST00000529612 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
CTSH-209ENST00000529612 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
CTSH-209ENST00000529612 RSF1Q96T23 1441 aaPredicted RBP24.09■■□□□ 1.45
CTSH-209ENST00000529612 TRIM41Q8WV44 630 aa24.06■■□□□ 1.44
CTSH-209ENST00000529612 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
CTSH-209ENST00000529612 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
CTSH-209ENST00000529612 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
CTSH-209ENST00000529612 CCDC88BA6NC98 1476 aa23.78■■□□□ 1.4
CTSH-209ENST00000529612 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
CTSH-209ENST00000529612 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
CTSH-209ENST00000529612 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
CTSH-209ENST00000529612 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
CTSH-209ENST00000529612 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
CTSH-209ENST00000529612 TOPBP1Q92547 1522 aa23.73■■□□□ 1.39
CTSH-209ENST00000529612 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
CTSH-209ENST00000529612 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
CTSH-209ENST00000529612 ARHGEF11O15085 1522 aa23.64■■□□□ 1.38
CTSH-209ENST00000529612 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
CTSH-209ENST00000529612 TARBP1Q13395 1621 aaKnown RBP23.6■■□□□ 1.37
CTSH-209ENST00000529612 CHD1O14646 1710 aa23.57■■□□□ 1.36
CTSH-209ENST00000529612 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
CTSH-209ENST00000529612 AQRO60306 1485 aaKnown RBP eCLIP23.47■■□□□ 1.359e-7■■■■□ 21.2
CTSH-209ENST00000529612 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
CTSH-209ENST00000529612 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
CTSH-209ENST00000529612 WDR97A6NE52 1622 aa23.34■■□□□ 1.33
CTSH-209ENST00000529612 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
CTSH-209ENST00000529612 CYB5RLQ6IPT4 315 aa23.3■■□□□ 1.32
CTSH-209ENST00000529612 FGD5Q6ZNL6 1462 aa23.28■■□□□ 1.32
CTSH-209ENST00000529612 SOGA1O94964 1423 aa23.27■■□□□ 1.32
CTSH-209ENST00000529612 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
CTSH-209ENST00000529612 TDRD9Q8NDG6 1382 aaKnown RBP23.26■■□□□ 1.31
CTSH-209ENST00000529612 CUX1P39880 1505 aa23.25■■□□□ 1.31
CTSH-209ENST00000529612 MAGI1Q96QZ7 1491 aaPredicted RBP23.2■■□□□ 1.3
CTSH-209ENST00000529612 FBLN2P98095 1184 aa23.2■■□□□ 1.3
CTSH-209ENST00000529612 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
CTSH-209ENST00000529612 PBRM1Q86U86 1689 aa23.14■■□□□ 1.29
CTSH-209ENST00000529612 GRIN2BQ13224 1484 aa23.14■■□□□ 1.29
CTSH-209ENST00000529612 SYNJ2O15056 1496 aa23.12■■□□□ 1.29
CTSH-209ENST00000529612 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.28
CTSH-209ENST00000529612 TRHP20396 242 aaPredicted RBP23.06■■□□□ 1.28
CTSH-209ENST00000529612 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
CTSH-209ENST00000529612 ABCA10Q8WWZ4 1543 aa23.03■■□□□ 1.28
CTSH-209ENST00000529612 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
CTSH-209ENST00000529612 ERCC6L2Q5T890 1561 aa22.9■■□□□ 1.26
CTSH-209ENST00000529612 ADAMTS12P58397 1594 aa22.89■■□□□ 1.26
CTSH-209ENST00000529612 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
CTSH-209ENST00000529612 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
CTSH-209ENST00000529612 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
CTSH-209ENST00000529612 NUP160Q12769 1436 aa22.84■■□□□ 1.25
CTSH-209ENST00000529612 SHROOM2Q13796 1616 aa22.84■■□□□ 1.25
CTSH-209ENST00000529612 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
CTSH-209ENST00000529612 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
CTSH-209ENST00000529612 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
CTSH-209ENST00000529612 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
CTSH-209ENST00000529612 KIF13AQ9H1H9 1805 aa22.67■■□□□ 1.22
CTSH-209ENST00000529612 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
CTSH-209ENST00000529612 RUSC2Q8N2Y8 1516 aa22.6■■□□□ 1.21
CTSH-209ENST00000529612 PRG4Q92954 1404 aaPredicted RBP22.55■■□□□ 1.2
CTSH-209ENST00000529612 AEBP2Q6ZN18 517 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms