RNA–Protein interactions for RNA: ENST00000529594.5

CD3D-204, Transcript of CD3d molecule, humanhuman

TSL 1 (best) BASIC

Gene CD3D, Length 422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD3D-204ENST00000529594 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
CD3D-204ENST00000529594 CCDC180Q9P1Z9 1646 aa20.65■□□□□ 0.9
CD3D-204ENST00000529594 ABCC9O60706 1549 aa19.82■□□□□ 0.76
CD3D-204ENST00000529594 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
CD3D-204ENST00000529594 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
CD3D-204ENST00000529594 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
CD3D-204ENST00000529594 DCAF8L2P0C7V8 631 aa19.43■□□□□ 0.7
CD3D-204ENST00000529594 NACADO15069 1562 aa19.36■□□□□ 0.69
CD3D-204ENST00000529594 RB1CC1Q8TDY2 1594 aa19.27■□□□□ 0.67
CD3D-204ENST00000529594 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
CD3D-204ENST00000529594 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
CD3D-204ENST00000529594 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
CD3D-204ENST00000529594 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
CD3D-204ENST00000529594 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
CD3D-204ENST00000529594 CECR2Q9BXF3 1484 aa18.23■□□□□ 0.51
CD3D-204ENST00000529594 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
CD3D-204ENST00000529594 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
CD3D-204ENST00000529594 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
CD3D-204ENST00000529594 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
CD3D-204ENST00000529594 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
CD3D-204ENST00000529594 PEG3Q9GZU2 1588 aa17.96■□□□□ 0.46
CD3D-204ENST00000529594 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
CD3D-204ENST00000529594 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
CD3D-204ENST00000529594 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
CD3D-204ENST00000529594 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
CD3D-204ENST00000529594 SUPT5HO00267 1087 aaKnown RBP17.88■□□□□ 0.45
CD3D-204ENST00000529594 WIZO95785 1651 aa17.85■□□□□ 0.45
CD3D-204ENST00000529594 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
CD3D-204ENST00000529594 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
CD3D-204ENST00000529594 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
CD3D-204ENST00000529594 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
CD3D-204ENST00000529594 CCDC88BA6NC98 1476 aa17.55■□□□□ 0.4
CD3D-204ENST00000529594 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
CD3D-204ENST00000529594 CFTRP13569 1480 aa17.37■□□□□ 0.37
CD3D-204ENST00000529594 LAMC3Q9Y6N6 1575 aa17.31■□□□□ 0.36
CD3D-204ENST00000529594 NESP48681 1621 aa17.27■□□□□ 0.36
CD3D-204ENST00000529594 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
CD3D-204ENST00000529594 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
CD3D-204ENST00000529594 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
CD3D-204ENST00000529594 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
CD3D-204ENST00000529594 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
CD3D-204ENST00000529594 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.31
CD3D-204ENST00000529594 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
CD3D-204ENST00000529594 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
CD3D-204ENST00000529594 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
CD3D-204ENST00000529594 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.3
CD3D-204ENST00000529594 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
CD3D-204ENST00000529594 CUX1P39880 1505 aa16.95■□□□□ 0.3
CD3D-204ENST00000529594 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
CD3D-204ENST00000529594 WDR62O43379 1518 aa16.92■□□□□ 0.3
CD3D-204ENST00000529594 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
CD3D-204ENST00000529594 THOC2Q8NI27 1593 aaKnown RBP16.91■□□□□ 0.3
CD3D-204ENST00000529594 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
CD3D-204ENST00000529594 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
CD3D-204ENST00000529594 SYNJ1O43426 1573 aa16.89■□□□□ 0.3
CD3D-204ENST00000529594 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
CD3D-204ENST00000529594 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
CD3D-204ENST00000529594 POLA1P09884 1462 aaPredicted RBP16.82■□□□□ 0.28
CD3D-204ENST00000529594 CUX2O14529 1486 aa16.78■□□□□ 0.28
CD3D-204ENST00000529594 SOGA1O94964 1423 aa16.77■□□□□ 0.27
CD3D-204ENST00000529594 IFT140Q96RY7 1462 aa16.75■□□□□ 0.27
CD3D-204ENST00000529594 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
CD3D-204ENST00000529594 ABCA10Q8WWZ4 1543 aa16.71■□□□□ 0.27
CD3D-204ENST00000529594 TARBP1Q13395 1621 aaKnown RBP16.68■□□□□ 0.26
CD3D-204ENST00000529594 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
CD3D-204ENST00000529594 EEA1Q15075 1411 aa16.62■□□□□ 0.25
CD3D-204ENST00000529594 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
CD3D-204ENST00000529594 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
CD3D-204ENST00000529594 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
CD3D-204ENST00000529594 GAPVD1Q14C86 1478 aa16.58■□□□□ 0.24
CD3D-204ENST00000529594 AQRO60306 1485 aaKnown RBP eCLIP16.57■□□□□ 0.24
CD3D-204ENST00000529594 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
CD3D-204ENST00000529594 RUSC2Q8N2Y8 1516 aa16.55■□□□□ 0.24
CD3D-204ENST00000529594 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
CD3D-204ENST00000529594 IGF1RP08069 1367 aa16.53■□□□□ 0.24
CD3D-204ENST00000529594 EIF4G3O43432 1585 aaKnown RBP16.52■□□□□ 0.24
CD3D-204ENST00000529594 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
CD3D-204ENST00000529594 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
CD3D-204ENST00000529594 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
CD3D-204ENST00000529594 MAGI1Q96QZ7 1491 aaPredicted RBP16.45■□□□□ 0.22
CD3D-204ENST00000529594 CARMIL1Q5VZK9 1371 aa16.43■□□□□ 0.22
CD3D-204ENST00000529594 FHAD1B1AJZ9 1412 aa16.43■□□□□ 0.22
CD3D-204ENST00000529594 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
CD3D-204ENST00000529594 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
CD3D-204ENST00000529594 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
CD3D-204ENST00000529594 CUL7Q14999 1698 aa16.4■□□□□ 0.22
CD3D-204ENST00000529594 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
CD3D-204ENST00000529594 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
CD3D-204ENST00000529594 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
CD3D-204ENST00000529594 KIF21BO75037 1637 aa16.34■□□□□ 0.21
CD3D-204ENST00000529594 CHMP7Q8WUX9 453 aaPredicted RBP16.34■□□□□ 0.21
CD3D-204ENST00000529594 GOLGA3Q08378 1498 aa16.32■□□□□ 0.2
CD3D-204ENST00000529594 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
CD3D-204ENST00000529594 FBLN2P98095 1184 aa16.29■□□□□ 0.2
CD3D-204ENST00000529594 NUP160Q12769 1436 aa16.23■□□□□ 0.19
CD3D-204ENST00000529594 LOC105371045A0A1W2PR82 267 aa16.23■□□□□ 0.19
CD3D-204ENST00000529594 UBTFP17480 764 aaKnown RBP16.23■□□□□ 0.19
CD3D-204ENST00000529594 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
CD3D-204ENST00000529594 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
CD3D-204ENST00000529594 KIAA0586Q9BVV6 1533 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms