RNA–Protein interactions for RNA: ENST00000529487.1

CCDC180-210, Transcript of coiled-coil domain containing 180, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC180, Length 5,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-210ENST00000529487 NISCHQ9Y2I1 1504 aa24.64■■□□□ 1.53
CCDC180-210ENST00000529487 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
CCDC180-210ENST00000529487 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
CCDC180-210ENST00000529487 FAM9AQ8IZU1 332 aaPredicted RBP22.67■■□□□ 1.22
CCDC180-210ENST00000529487 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
CCDC180-210ENST00000529487 APLP2Q06481 763 aa22.36■■□□□ 1.17
CCDC180-210ENST00000529487 PELP1Q8IZL8 1130 aaKnown RBP21.99■■□□□ 1.11
CCDC180-210ENST00000529487 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
CCDC180-210ENST00000529487 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
CCDC180-210ENST00000529487 EHMT2Q96KQ7 1210 aa21.46■■□□□ 1.03
CCDC180-210ENST00000529487 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
CCDC180-210ENST00000529487 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.97
CCDC180-210ENST00000529487 CENPBP07199 599 aaPredicted RBP21.02■□□□□ 0.96
CCDC180-210ENST00000529487 CCER1Q8TC90 406 aaPredicted RBP21.01■□□□□ 0.95
CCDC180-210ENST00000529487 ABCC9O60706 1549 aa20.94■□□□□ 0.94
CCDC180-210ENST00000529487 RANGAP1P46060 587 aaPredicted RBP20.93■□□□□ 0.94
CCDC180-210ENST00000529487 PCGF6Q9BYE7 350 aa20.92■□□□□ 0.94
CCDC180-210ENST00000529487 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
CCDC180-210ENST00000529487 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
CCDC180-210ENST00000529487 TRIM26Q12899 539 aaPredicted RBP20.71■□□□□ 0.91
CCDC180-210ENST00000529487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
CCDC180-210ENST00000529487 NEFLP07196 543 aa20.67■□□□□ 0.9
CCDC180-210ENST00000529487 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
CCDC180-210ENST00000529487 MYT1LQ9UL68 1186 aa20.6■□□□□ 0.89
CCDC180-210ENST00000529487 ERICH6Q7L0X2 663 aa20.54■□□□□ 0.88
CCDC180-210ENST00000529487 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
CCDC180-210ENST00000529487 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
CCDC180-210ENST00000529487 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
CCDC180-210ENST00000529487 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
CCDC180-210ENST00000529487 SCRIBQ14160 1630 aa20.23■□□□□ 0.83
CCDC180-210ENST00000529487 ITGAEP38570 1179 aa20.18■□□□□ 0.82
CCDC180-210ENST00000529487 NACADO15069 1562 aa20.18■□□□□ 0.82
CCDC180-210ENST00000529487 CDK11AQ9UQ88 783 aaPredicted RBP20.17■□□□□ 0.82
CCDC180-210ENST00000529487 MYT1Q01538 1121 aa20.09■□□□□ 0.81
CCDC180-210ENST00000529487 FAM50AQ14320 339 aaKnown RBP20.07■□□□□ 0.8
CCDC180-210ENST00000529487 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
CCDC180-210ENST00000529487 HRCP23327 699 aa20.02■□□□□ 0.79
CCDC180-210ENST00000529487 DAXXQ9UER7 740 aaPredicted RBP20■□□□□ 0.79
CCDC180-210ENST00000529487 LOC105371045A0A1W2PR82 267 aa19.99■□□□□ 0.79
CCDC180-210ENST00000529487 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
CCDC180-210ENST00000529487 ACIN1Q9UKV3 1341 aaKnown RBP19.98■□□□□ 0.79
CCDC180-210ENST00000529487 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
CCDC180-210ENST00000529487 POLR3GLQ9BT43 218 aa19.96■□□□□ 0.79
CCDC180-210ENST00000529487 FBLN2P98095 1184 aa19.94■□□□□ 0.78
CCDC180-210ENST00000529487 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
CCDC180-210ENST00000529487 EEA1Q15075 1411 aa19.86■□□□□ 0.77
CCDC180-210ENST00000529487 YTHDC1Q96MU7 727 aaKnown RBP19.85■□□□□ 0.77
CCDC180-210ENST00000529487 NPM1P06748 294 aaKnown RBP eCLIP19.85■□□□□ 0.77
CCDC180-210ENST00000529487 SLC4A1APQ9BWU0 796 aaKnown RBP19.82■□□□□ 0.76
CCDC180-210ENST00000529487 ESF1Q9H501 851 aaKnown RBP19.73■□□□□ 0.75
CCDC180-210ENST00000529487 NEFMP07197 916 aa19.72■□□□□ 0.75
CCDC180-210ENST00000529487 ANP32CO43423 234 aa19.68■□□□□ 0.74
CCDC180-210ENST00000529487 BAZ1BQ9UIG0 1483 aaKnown RBP19.63■□□□□ 0.73
CCDC180-210ENST00000529487 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
CCDC180-210ENST00000529487 DIEXFQ68CQ4 756 aaKnown RBP19.61■□□□□ 0.73
CCDC180-210ENST00000529487 ZBTB47Q9UFB7 747 aaPredicted RBP19.6■□□□□ 0.73
CCDC180-210ENST00000529487 RSF1Q96T23 1441 aaPredicted RBP19.58■□□□□ 0.72
CCDC180-210ENST00000529487 NEUROD1Q13562 356 aa19.56■□□□□ 0.72
CCDC180-210ENST00000529487 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
CCDC180-210ENST00000529487 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
CCDC180-210ENST00000529487 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
CCDC180-210ENST00000529487 BCANQ96GW7 911 aa19.48■□□□□ 0.71
CCDC180-210ENST00000529487 ZNF777Q9ULD5 760 aaPredicted RBP19.48■□□□□ 0.71
CCDC180-210ENST00000529487 ZNF316A6NFI3 1004 aaPredicted RBP19.47■□□□□ 0.71
CCDC180-210ENST00000529487 P3H3Q8IVL6 736 aa19.47■□□□□ 0.71
CCDC180-210ENST00000529487 GOLGA3Q08378 1498 aa19.46■□□□□ 0.71
CCDC180-210ENST00000529487 ZNF326Q5BKZ1 582 aaKnown RBP19.45■□□□□ 0.7
CCDC180-210ENST00000529487 TSPY4P0CV99 314 aa19.45■□□□□ 0.7
CCDC180-210ENST00000529487 TSPY10P0CW01 314 aa19.45■□□□□ 0.7
CCDC180-210ENST00000529487 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
CCDC180-210ENST00000529487 TONSLQ96HA7 1378 aa19.44■□□□□ 0.7
CCDC180-210ENST00000529487 MTUS2Q5JR59 1369 aa19.43■□□□□ 0.7
CCDC180-210ENST00000529487 STAG3Q9UJ98 1225 aa19.41■□□□□ 0.7
CCDC180-210ENST00000529487 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
CCDC180-210ENST00000529487 CLIP1P30622 1438 aa19.37■□□□□ 0.69
CCDC180-210ENST00000529487 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
CCDC180-210ENST00000529487 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
CCDC180-210ENST00000529487 RTL5Q5HYW3 569 aaPredicted RBP19.34■□□□□ 0.69
CCDC180-210ENST00000529487 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
CCDC180-210ENST00000529487 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
CCDC180-210ENST00000529487 CNGB1Q14028 1251 aaPredicted RBP19.29■□□□□ 0.68
CCDC180-210ENST00000529487 PLEKHD1A6NEE1 506 aa19.29■□□□□ 0.68
CCDC180-210ENST00000529487 ARID3CA6NKF2 412 aa19.22■□□□□ 0.67
CCDC180-210ENST00000529487 FHAD1B1AJZ9 1412 aa19.2■□□□□ 0.66
CCDC180-210ENST00000529487 TNIKQ9UKE5 1360 aa19.2■□□□□ 0.66
CCDC180-210ENST00000529487 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
CCDC180-210ENST00000529487 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
CCDC180-210ENST00000529487 SLC24A1O60721 1099 aa19.15■□□□□ 0.66
CCDC180-210ENST00000529487 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
CCDC180-210ENST00000529487 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.11■□□□□ 0.65
CCDC180-210ENST00000529487 CEP162Q5TB80 1403 aa19.09■□□□□ 0.65
CCDC180-210ENST00000529487 CARMIL2Q6F5E8 1435 aa19.02■□□□□ 0.64
CCDC180-210ENST00000529487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19■□□□□ 0.63
CCDC180-210ENST00000529487 CFDP1Q9UEE9 299 aaPredicted RBP18.99■□□□□ 0.63
CCDC180-210ENST00000529487 WDR43Q15061 677 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCDC180-210ENST00000529487 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
CCDC180-210ENST00000529487 PPP1R15AO75807 674 aaPredicted RBP18.96■□□□□ 0.63
CCDC180-210ENST00000529487 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
CCDC180-210ENST00000529487 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
CCDC180-210ENST00000529487 UPF2Q9HAU5 1272 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms