RNA–Protein interactions for RNA: ENST00000529402.1

CHORDC1-204, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 3

Gene CHORDC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-204ENST00000529402 NISCHQ9Y2I1 1504 aa36.73■■■■□ 3.47
CHORDC1-204ENST00000529402 CCDC180Q9P1Z9 1646 aa32.8■■■□□ 2.84
CHORDC1-204ENST00000529402 ABCC9O60706 1549 aa32.7■■■□□ 2.83
CHORDC1-204ENST00000529402 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
CHORDC1-204ENST00000529402 DCAF8L2P0C7V8 631 aa30.94■■■□□ 2.54
CHORDC1-204ENST00000529402 NACADO15069 1562 aa30.92■■■□□ 2.54
CHORDC1-204ENST00000529402 UNC13AQ9UPW8 1703 aa30.57■■■□□ 2.48
CHORDC1-204ENST00000529402 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
CHORDC1-204ENST00000529402 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.47
CHORDC1-204ENST00000529402 ZCCHC6Q5VYS8 1495 aaKnown RBP30.5■■■□□ 2.47
CHORDC1-204ENST00000529402 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
CHORDC1-204ENST00000529402 BICRAQ9NZM4 1560 aa30.31■■■□□ 2.44
CHORDC1-204ENST00000529402 DCAF1Q9Y4B6 1507 aa30.26■■■□□ 2.43
CHORDC1-204ENST00000529402 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
CHORDC1-204ENST00000529402 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
CHORDC1-204ENST00000529402 CC2D2AQ9P2K1 1620 aa29.52■■■□□ 2.32
CHORDC1-204ENST00000529402 EIF4G1Q04637 1599 aaKnown RBP29.49■■■□□ 2.31
CHORDC1-204ENST00000529402 CECR2Q9BXF3 1484 aa29.36■■■□□ 2.29
CHORDC1-204ENST00000529402 SMARCA4P51532 1647 aa28.63■■■□□ 2.17
CHORDC1-204ENST00000529402 ATAD2BQ9ULI0 1458 aa28.58■■■□□ 2.17
CHORDC1-204ENST00000529402 NCAPD3P42695 1498 aa28.56■■■□□ 2.16
CHORDC1-204ENST00000529402 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
CHORDC1-204ENST00000529402 SMARCA2P51531 1590 aa28.43■■■□□ 2.14
CHORDC1-204ENST00000529402 MROH2BQ7Z745 1585 aa28.39■■■□□ 2.14
CHORDC1-204ENST00000529402 HMGXB3Q12766 1538 aa28.38■■■□□ 2.13
CHORDC1-204ENST00000529402 BAZ1BQ9UIG0 1483 aaKnown RBP28.29■■■□□ 2.12
CHORDC1-204ENST00000529402 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
CHORDC1-204ENST00000529402 NESP48681 1621 aa28.21■■■□□ 2.11
CHORDC1-204ENST00000529402 ERCC6Q03468 1493 aa28.12■■■□□ 2.09
CHORDC1-204ENST00000529402 WIZO95785 1651 aa28.08■■■□□ 2.09
CHORDC1-204ENST00000529402 CUX2O14529 1486 aa27.93■■■□□ 2.06
CHORDC1-204ENST00000529402 LAMC3Q9Y6N6 1575 aa27.88■■■□□ 2.05
CHORDC1-204ENST00000529402 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
CHORDC1-204ENST00000529402 KIF21AQ7Z4S6 1674 aa27.83■■■□□ 2.05
CHORDC1-204ENST00000529402 THOC2Q8NI27 1593 aaKnown RBP27.81■■■□□ 2.04
CHORDC1-204ENST00000529402 CADPSQ9ULU8 1353 aa27.72■■■□□ 2.03
CHORDC1-204ENST00000529402 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
CHORDC1-204ENST00000529402 DNAJC5Q9H3Z4 198 aa27.67■■■□□ 2.02
CHORDC1-204ENST00000529402 TOP2AP11388 1531 aaKnown RBP27.65■■■□□ 2.02
CHORDC1-204ENST00000529402 MRC2Q9UBG0 1479 aa27.5■■□□□ 1.99
CHORDC1-204ENST00000529402 CFTRP13569 1480 aa27.46■■□□□ 1.99
CHORDC1-204ENST00000529402 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
CHORDC1-204ENST00000529402 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
CHORDC1-204ENST00000529402 WDR62O43379 1518 aa27.42■■□□□ 1.98
CHORDC1-204ENST00000529402 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
CHORDC1-204ENST00000529402 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.96
CHORDC1-204ENST00000529402 PRDM2Q13029 1718 aa27.25■■□□□ 1.95
CHORDC1-204ENST00000529402 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
CHORDC1-204ENST00000529402 ZNF608Q9ULD9 1512 aaPredicted RBP26.91■■□□□ 1.9
CHORDC1-204ENST00000529402 DNMBPQ6XZF7 1577 aa26.87■■□□□ 1.89
CHORDC1-204ENST00000529402 SUPT5HO00267 1087 aaKnown RBP26.85■■□□□ 1.89
CHORDC1-204ENST00000529402 IFT140Q96RY7 1462 aa26.85■■□□□ 1.89
CHORDC1-204ENST00000529402 ABCC8Q09428 1581 aa26.77■■□□□ 1.88
CHORDC1-204ENST00000529402 EIF4G3O43432 1585 aaKnown RBP26.74■■□□□ 1.87
CHORDC1-204ENST00000529402 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
CHORDC1-204ENST00000529402 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
CHORDC1-204ENST00000529402 OSCARQ8IYS5 282 aa26.69■■□□□ 1.86
CHORDC1-204ENST00000529402 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
CHORDC1-204ENST00000529402 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.867e-7■■□□□ 13.9
CHORDC1-204ENST00000529402 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
CHORDC1-204ENST00000529402 CUX1P39880 1505 aa26.65■■□□□ 1.86
CHORDC1-204ENST00000529402 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
CHORDC1-204ENST00000529402 SOGA1O94964 1423 aa26.56■■□□□ 1.84
CHORDC1-204ENST00000529402 TDRD9Q8NDG6 1382 aaKnown RBP26.54■■□□□ 1.84
CHORDC1-204ENST00000529402 CHD1O14646 1710 aa26.53■■□□□ 1.84
CHORDC1-204ENST00000529402 RIMBP3CA6NJZ7 1639 aa26.46■■□□□ 1.83
CHORDC1-204ENST00000529402 RIMBP3BA6NNM3 1639 aa26.46■■□□□ 1.83
CHORDC1-204ENST00000529402 RIMBP3Q9UFD9 1639 aa26.46■■□□□ 1.83
CHORDC1-204ENST00000529402 WDR97A6NE52 1622 aa26.42■■□□□ 1.82
CHORDC1-204ENST00000529402 FBLN2P98095 1184 aa26.41■■□□□ 1.82
CHORDC1-204ENST00000529402 SNAPC4Q5SXM2 1469 aa26.4■■□□□ 1.82
CHORDC1-204ENST00000529402 ARHGEF11O15085 1522 aa26.36■■□□□ 1.81
CHORDC1-204ENST00000529402 PBRM1Q86U86 1689 aa26.29■■□□□ 1.8
CHORDC1-204ENST00000529402 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
CHORDC1-204ENST00000529402 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
CHORDC1-204ENST00000529402 ABCA10Q8WWZ4 1543 aa26.26■■□□□ 1.79
CHORDC1-204ENST00000529402 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
CHORDC1-204ENST00000529402 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
CHORDC1-204ENST00000529402 BIVM-ERCC5R4GMW8 1640 aa26.24■■□□□ 1.79
CHORDC1-204ENST00000529402 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
CHORDC1-204ENST00000529402 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
CHORDC1-204ENST00000529402 TOP2BQ02880 1626 aa26.22■■□□□ 1.79
CHORDC1-204ENST00000529402 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
CHORDC1-204ENST00000529402 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
CHORDC1-204ENST00000529402 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
CHORDC1-204ENST00000529402 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
CHORDC1-204ENST00000529402 CYB5RLQ6IPT4 315 aa26.14■■□□□ 1.78
CHORDC1-204ENST00000529402 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
CHORDC1-204ENST00000529402 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
CHORDC1-204ENST00000529402 CEP170Q5SW79 1584 aa25.95■■□□□ 1.74
CHORDC1-204ENST00000529402 ERCC6L2Q5T890 1561 aa25.9■■□□□ 1.74
CHORDC1-204ENST00000529402 ERICH3Q5RHP9 1530 aa25.9■■□□□ 1.74
CHORDC1-204ENST00000529402 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
CHORDC1-204ENST00000529402 NUP160Q12769 1436 aa25.88■■□□□ 1.73
CHORDC1-204ENST00000529402 SHROOM2Q13796 1616 aa25.75■■□□□ 1.71
CHORDC1-204ENST00000529402 TRHP20396 242 aaPredicted RBP25.75■■□□□ 1.71
CHORDC1-204ENST00000529402 IGF1RP08069 1367 aa25.68■■□□□ 1.7
CHORDC1-204ENST00000529402 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
CHORDC1-204ENST00000529402 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
CHORDC1-204ENST00000529402 PRG4Q92954 1404 aaPredicted RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms