RNA–Protein interactions for RNA: ENST00000529373.1

UBTF-208, Transcript of upstream binding transcription factor, humanhuman

TSL 2

Gene UBTF, Length 674 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-208ENST00000529373 NISCHQ9Y2I1 1504 aa52.17■■■■■ 5.94
UBTF-208ENST00000529373 CCDC180Q9P1Z9 1646 aa46.74■■■■■ 5.07
UBTF-208ENST00000529373 ABCC9O60706 1549 aa46.35■■■■■ 5.01
UBTF-208ENST00000529373 RB1CC1Q8TDY2 1594 aa44.26■■■■■ 4.68
UBTF-208ENST00000529373 NACADO15069 1562 aa44.05■■■■■ 4.64
UBTF-208ENST00000529373 DCAF8L2P0C7V8 631 aa43.69■■■■■ 4.58
UBTF-208ENST00000529373 MYO15BQ96JP2 1530 aa43.57■■■■■ 4.56
UBTF-208ENST00000529373 UNC13AQ9UPW8 1703 aa43.39■■■■■ 4.54
UBTF-208ENST00000529373 ZCCHC6Q5VYS8 1495 aaKnown RBP43.35■■■■■ 4.53
UBTF-208ENST00000529373 DNAJC5BQ9UF47 199 aa43.18■■■■■ 4.5
UBTF-208ENST00000529373 PABPN1Q86U42 306 aaKnown RBP eCLIP43.14■■■■■ 4.5
UBTF-208ENST00000529373 DCAF1Q9Y4B6 1507 aa43.13■■■■■ 4.5
UBTF-208ENST00000529373 BICRAQ9NZM4 1560 aa43.05■■■■■ 4.48
UBTF-208ENST00000529373 SCRIBQ14160 1630 aa42.58■■■■■ 4.41
UBTF-208ENST00000529373 SHROOM4Q9ULL8 1493 aa42.44■■■■■ 4.38
UBTF-208ENST00000529373 CC2D2AQ9P2K1 1620 aa41.93■■■■■ 4.3
UBTF-208ENST00000529373 EIF4G1Q04637 1599 aaKnown RBP41.93■■■■■ 4.3
UBTF-208ENST00000529373 CECR2Q9BXF3 1484 aa41.72■■■■■ 4.27
UBTF-208ENST00000529373 SMARCA4P51532 1647 aa40.67■■■■■ 4.1
UBTF-208ENST00000529373 NCAPD3P42695 1498 aa40.64■■■■■ 4.1
UBTF-208ENST00000529373 ATAD2BQ9ULI0 1458 aa40.58■■■■■ 4.09
UBTF-208ENST00000529373 SMARCA2P51531 1590 aa40.48■■■■■ 4.07
UBTF-208ENST00000529373 BAZ1AQ9NRL2 1556 aaPredicted RBP40.47■■■■■ 4.07
UBTF-208ENST00000529373 HMGXB3Q12766 1538 aa40.42■■■■■ 4.06
UBTF-208ENST00000529373 PEG3Q9GZU2 1588 aa40.28■■■■■ 4.04
UBTF-208ENST00000529373 MROH2BQ7Z745 1585 aa40.23■■■■■ 4.03
UBTF-208ENST00000529373 BAZ1BQ9UIG0 1483 aaKnown RBP40.19■■■■■ 4.02
UBTF-208ENST00000529373 ERCC6Q03468 1493 aa39.95■■■■□ 3.99
UBTF-208ENST00000529373 NESP48681 1621 aa39.94■■■■□ 3.99
UBTF-208ENST00000529373 CUX2O14529 1486 aa39.81■■■■□ 3.96
UBTF-208ENST00000529373 WIZO95785 1651 aa39.77■■■■□ 3.96
UBTF-208ENST00000529373 LAMC3Q9Y6N6 1575 aa39.7■■■■□ 3.95
UBTF-208ENST00000529373 THOC2Q8NI27 1593 aaKnown RBP39.54■■■■□ 3.92
UBTF-208ENST00000529373 KIF21AQ7Z4S6 1674 aa39.5■■■■□ 3.91
UBTF-208ENST00000529373 RSF1Q96T23 1441 aaPredicted RBP39.48■■■■□ 3.91
UBTF-208ENST00000529373 CADPSQ9ULU8 1353 aa39.39■■■■□ 3.9
UBTF-208ENST00000529373 PDS5BQ9NTI5 1447 aa39.39■■■■□ 3.9
UBTF-208ENST00000529373 DNAJC5Q9H3Z4 198 aa39.36■■■■□ 3.89
UBTF-208ENST00000529373 TOP2AP11388 1531 aaKnown RBP39.28■■■■□ 3.88
UBTF-208ENST00000529373 MRC2Q9UBG0 1479 aa39.1■■■■□ 3.85
UBTF-208ENST00000529373 CFTRP13569 1480 aa39.05■■■■□ 3.84
UBTF-208ENST00000529373 WDR62O43379 1518 aa39.04■■■■□ 3.84
UBTF-208ENST00000529373 CEP164Q9UPV0 1460 aa38.99■■■■□ 3.83
UBTF-208ENST00000529373 FANCD2Q9BXW9 1451 aa38.98■■■■□ 3.83
UBTF-208ENST00000529373 PRDM2Q13029 1718 aa38.8■■■■□ 3.8
UBTF-208ENST00000529373 CCDC88BA6NC98 1476 aa38.79■■■■□ 3.8
UBTF-208ENST00000529373 URB2Q14146 1524 aaKnown RBP38.68■■■■□ 3.78
UBTF-208ENST00000529373 TOPBP1Q92547 1522 aa38.3■■■■□ 3.72
UBTF-208ENST00000529373 DNMBPQ6XZF7 1577 aa38.2■■■■□ 3.71
UBTF-208ENST00000529373 IFT140Q96RY7 1462 aa38.19■■■■□ 3.7
UBTF-208ENST00000529373 ABCC8Q09428 1581 aa38.16■■■■□ 3.7
UBTF-208ENST00000529373 ZNF608Q9ULD9 1512 aaPredicted RBP38.14■■■■□ 3.7
UBTF-208ENST00000529373 EIF4G3O43432 1585 aaKnown RBP37.99■■■■□ 3.67
UBTF-208ENST00000529373 TARBP1Q13395 1621 aaKnown RBP37.98■■■■□ 3.67
UBTF-208ENST00000529373 POLA1P09884 1462 aaPredicted RBP37.94■■■■□ 3.66
UBTF-208ENST00000529373 OSCARQ8IYS5 282 aa37.93■■■■□ 3.66
UBTF-208ENST00000529373 SUPT5HO00267 1087 aaKnown RBP37.84■■■■□ 3.65
UBTF-208ENST00000529373 AQRO60306 1485 aaKnown RBP eCLIP37.79■■■■□ 3.643e-7■■□□□ 14
UBTF-208ENST00000529373 CUX1P39880 1505 aa37.78■■■■□ 3.64
UBTF-208ENST00000529373 RAD54L2Q9Y4B4 1467 aa37.77■■■■□ 3.64
UBTF-208ENST00000529373 FGD5Q6ZNL6 1462 aa37.73■■■■□ 3.63
UBTF-208ENST00000529373 TRIM41Q8WV44 630 aa37.73■■■■□ 3.63
UBTF-208ENST00000529373 SOGA1O94964 1423 aa37.69■■■■□ 3.62
UBTF-208ENST00000529373 CHD1O14646 1710 aa37.66■■■■□ 3.62
UBTF-208ENST00000529373 WDR97A6NE52 1622 aa37.58■■■■□ 3.61
UBTF-208ENST00000529373 TDRD9Q8NDG6 1382 aaKnown RBP37.58■■■■□ 3.61
UBTF-208ENST00000529373 RIMBP3CA6NJZ7 1639 aa37.57■■■■□ 3.6
UBTF-208ENST00000529373 RIMBP3BA6NNM3 1639 aa37.57■■■■□ 3.6
UBTF-208ENST00000529373 RIMBP3Q9UFD9 1639 aa37.57■■■■□ 3.6
UBTF-208ENST00000529373 ARHGEF11O15085 1522 aa37.46■■■■□ 3.59
UBTF-208ENST00000529373 SNAPC4Q5SXM2 1469 aa37.45■■■■□ 3.59
UBTF-208ENST00000529373 FBLN2P98095 1184 aa37.37■■■■□ 3.57
UBTF-208ENST00000529373 GRIN2BQ13224 1484 aa37.36■■■■□ 3.57
UBTF-208ENST00000529373 MAGI1Q96QZ7 1491 aaPredicted RBP37.35■■■■□ 3.57
UBTF-208ENST00000529373 PBRM1Q86U86 1689 aa37.33■■■■□ 3.57
UBTF-208ENST00000529373 ABCA10Q8WWZ4 1543 aa37.32■■■■□ 3.57
UBTF-208ENST00000529373 ABCA5Q8WWZ7 1642 aa37.3■■■■□ 3.56
UBTF-208ENST00000529373 BIVM-ERCC5R4GMW8 1640 aa37.28■■■■□ 3.56
UBTF-208ENST00000529373 GAPVD1Q14C86 1478 aa37.27■■■■□ 3.56
UBTF-208ENST00000529373 TOP2BQ02880 1626 aa37.26■■■■□ 3.56
UBTF-208ENST00000529373 SYNJ1O43426 1573 aa37.25■■■■□ 3.55
UBTF-208ENST00000529373 CLASP1Q7Z460 1538 aa37.22■■■■□ 3.55
UBTF-208ENST00000529373 SYNJ2O15056 1496 aa37.22■■■■□ 3.55
UBTF-208ENST00000529373 WRNQ14191 1432 aaPredicted RBP eCLIP37.2■■■■□ 3.55
UBTF-208ENST00000529373 CHMP7Q8WUX9 453 aaPredicted RBP37.15■■■■□ 3.54
UBTF-208ENST00000529373 ARAP1Q96P48 1450 aa37.13■■■■□ 3.54
UBTF-208ENST00000529373 CYB5RLQ6IPT4 315 aa37.04■■■■□ 3.52
UBTF-208ENST00000529373 ADAMTS12P58397 1594 aa36.99■■■■□ 3.51
UBTF-208ENST00000529373 GRIN2AQ12879 1464 aa36.91■■■■□ 3.5
UBTF-208ENST00000529373 ERICH3Q5RHP9 1530 aa36.85■■■■□ 3.49
UBTF-208ENST00000529373 CEP170Q5SW79 1584 aa36.81■■■■□ 3.48
UBTF-208ENST00000529373 FHAD1B1AJZ9 1412 aa36.8■■■■□ 3.48
UBTF-208ENST00000529373 NUP160Q12769 1436 aa36.78■■■■□ 3.48
UBTF-208ENST00000529373 ERCC6L2Q5T890 1561 aa36.67■■■■□ 3.46
UBTF-208ENST00000529373 SHROOM2Q13796 1616 aa36.64■■■■□ 3.46
UBTF-208ENST00000529373 TRHP20396 242 aaPredicted RBP36.48■■■■□ 3.43
UBTF-208ENST00000529373 RUSC2Q8N2Y8 1516 aa36.48■■■■□ 3.43
UBTF-208ENST00000529373 KIF27Q86VH2 1401 aa36.45■■■■□ 3.43
UBTF-208ENST00000529373 IGF1RP08069 1367 aa36.41■■■■□ 3.42
UBTF-208ENST00000529373 CUL7Q14999 1698 aa36.41■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms