RNA–Protein interactions for RNA: ENST00000529286.1

NUP214-220, Transcript of nucleoporin 214, humanhuman

TSL 3

Gene NUP214, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-220ENST00000529286 NISCHQ9Y2I1 1504 aa23.24■■□□□ 1.31
NUP214-220ENST00000529286 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
NUP214-220ENST00000529286 ABCC9O60706 1549 aa19.61■□□□□ 0.73
NUP214-220ENST00000529286 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
NUP214-220ENST00000529286 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
NUP214-220ENST00000529286 MYO15BQ96JP2 1530 aa19.17■□□□□ 0.66
NUP214-220ENST00000529286 NACADO15069 1562 aa19.15■□□□□ 0.66
NUP214-220ENST00000529286 DCAF8L2P0C7V8 631 aa19.14■□□□□ 0.65
NUP214-220ENST00000529286 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
NUP214-220ENST00000529286 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
NUP214-220ENST00000529286 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
NUP214-220ENST00000529286 SHROOM4Q9ULL8 1493 aa18.59■□□□□ 0.57
NUP214-220ENST00000529286 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
NUP214-220ENST00000529286 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
NUP214-220ENST00000529286 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
NUP214-220ENST00000529286 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
NUP214-220ENST00000529286 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
NUP214-220ENST00000529286 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
NUP214-220ENST00000529286 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
NUP214-220ENST00000529286 RSF1Q96T23 1441 aaPredicted RBP17.86■□□□□ 0.45
NUP214-220ENST00000529286 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
NUP214-220ENST00000529286 CC2D2AQ9P2K1 1620 aa17.79■□□□□ 0.44
NUP214-220ENST00000529286 WIZO95785 1651 aa17.78■□□□□ 0.44
NUP214-220ENST00000529286 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
NUP214-220ENST00000529286 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
NUP214-220ENST00000529286 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
NUP214-220ENST00000529286 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
NUP214-220ENST00000529286 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
NUP214-220ENST00000529286 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
NUP214-220ENST00000529286 TOP2AP11388 1531 aaKnown RBP17.61■□□□□ 0.41
NUP214-220ENST00000529286 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
NUP214-220ENST00000529286 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
NUP214-220ENST00000529286 CFTRP13569 1480 aa17.15■□□□□ 0.34
NUP214-220ENST00000529286 LAMC3Q9Y6N6 1575 aa17.14■□□□□ 0.33
NUP214-220ENST00000529286 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
NUP214-220ENST00000529286 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
NUP214-220ENST00000529286 NESP48681 1621 aa17.12■□□□□ 0.33
NUP214-220ENST00000529286 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
NUP214-220ENST00000529286 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
NUP214-220ENST00000529286 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.3
NUP214-220ENST00000529286 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
NUP214-220ENST00000529286 ABCC8Q09428 1581 aa16.89■□□□□ 0.3
NUP214-220ENST00000529286 ERCC6Q03468 1493 aa16.85■□□□□ 0.29
NUP214-220ENST00000529286 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
NUP214-220ENST00000529286 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
NUP214-220ENST00000529286 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
NUP214-220ENST00000529286 CUX1P39880 1505 aa16.8■□□□□ 0.28
NUP214-220ENST00000529286 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
NUP214-220ENST00000529286 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
NUP214-220ENST00000529286 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
NUP214-220ENST00000529286 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
NUP214-220ENST00000529286 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
NUP214-220ENST00000529286 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
NUP214-220ENST00000529286 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
NUP214-220ENST00000529286 WDR62O43379 1518 aa16.75■□□□□ 0.27
NUP214-220ENST00000529286 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
NUP214-220ENST00000529286 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
NUP214-220ENST00000529286 POLA1P09884 1462 aaPredicted RBP16.64■□□□□ 0.25
NUP214-220ENST00000529286 CUX2O14529 1486 aa16.59■□□□□ 0.25
NUP214-220ENST00000529286 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
NUP214-220ENST00000529286 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
NUP214-220ENST00000529286 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
NUP214-220ENST00000529286 SOGA1O94964 1423 aa16.54■□□□□ 0.24
NUP214-220ENST00000529286 IFT140Q96RY7 1462 aa16.53■□□□□ 0.24
NUP214-220ENST00000529286 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
NUP214-220ENST00000529286 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
NUP214-220ENST00000529286 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
NUP214-220ENST00000529286 ZNF608Q9ULD9 1512 aaPredicted RBP16.44■□□□□ 0.22
NUP214-220ENST00000529286 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
NUP214-220ENST00000529286 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
NUP214-220ENST00000529286 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
NUP214-220ENST00000529286 EEA1Q15075 1411 aa16.39■□□□□ 0.21
NUP214-220ENST00000529286 PBRM1Q86U86 1689 aa16.39■□□□□ 0.21
NUP214-220ENST00000529286 AQRO60306 1485 aaKnown RBP eCLIP16.37■□□□□ 0.21
NUP214-220ENST00000529286 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
NUP214-220ENST00000529286 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
NUP214-220ENST00000529286 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
NUP214-220ENST00000529286 GRIN2BQ13224 1484 aa16.31■□□□□ 0.2
NUP214-220ENST00000529286 IGF1RP08069 1367 aa16.29■□□□□ 0.2
NUP214-220ENST00000529286 CUL7Q14999 1698 aa16.29■□□□□ 0.2
NUP214-220ENST00000529286 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
NUP214-220ENST00000529286 ADAMTS12P58397 1594 aa16.26■□□□□ 0.19
NUP214-220ENST00000529286 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
NUP214-220ENST00000529286 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
NUP214-220ENST00000529286 KIF21BO75037 1637 aa16.24■□□□□ 0.19
NUP214-220ENST00000529286 MAGI1Q96QZ7 1491 aaPredicted RBP16.23■□□□□ 0.19
NUP214-220ENST00000529286 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
NUP214-220ENST00000529286 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
NUP214-220ENST00000529286 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
NUP214-220ENST00000529286 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
NUP214-220ENST00000529286 GOLGA3Q08378 1498 aa16.15■□□□□ 0.18
NUP214-220ENST00000529286 CHD1O14646 1710 aa16.14■□□□□ 0.17
NUP214-220ENST00000529286 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
NUP214-220ENST00000529286 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
NUP214-220ENST00000529286 CTTNBP2Q8WZ74 1663 aa16.07■□□□□ 0.16
NUP214-220ENST00000529286 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
NUP214-220ENST00000529286 CHMP7Q8WUX9 453 aaPredicted RBP16.06■□□□□ 0.16
NUP214-220ENST00000529286 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
NUP214-220ENST00000529286 NUP160Q12769 1436 aa16.03■□□□□ 0.16
NUP214-220ENST00000529286 FBLN2P98095 1184 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms