RNA–Protein interactions for RNA: ENST00000529283.5

PPP1R16A-208, Transcript of protein phosphatase 1 regulatory subunit 16A, human

TSL 5

Gene PPP1R16A, Length 636 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R16A-208	ENST00000529283	NISCH	Q9Y2I1	1504 aa		56.86	■■■■■ 6.69
PPP1R16A-208	ENST00000529283	CCDC180	Q9P1Z9	1646 aa		50.6	■■■■■ 5.69
PPP1R16A-208	ENST00000529283	ABCC9	O60706	1549 aa		49.43	■■■■■ 5.5
PPP1R16A-208	ENST00000529283	RB1CC1	Q8TDY2	1594 aa		47.62	■■■■■ 5.21
PPP1R16A-208	ENST00000529283	NACAD	O15069	1562 aa		47.57	■■■■■ 5.21
PPP1R16A-208	ENST00000529283	DCAF8L2	P0C7V8	631 aa		47.43	■■■■■ 5.18
PPP1R16A-208	ENST00000529283	ZCCHC6	Q5VYS8	1495 aa	Known RBP	47.36	■■■■■ 5.17
PPP1R16A-208	ENST00000529283	MYO15B	Q96JP2	1530 aa		47.31	■■■■■ 5.16
PPP1R16A-208	ENST00000529283	DCAF1	Q9Y4B6	1507 aa		47.1	■■■■■ 5.13
PPP1R16A-208	ENST00000529283	UNC13A	Q9UPW8	1703 aa		46.51	■■■■■ 5.04
PPP1R16A-208	ENST00000529283	PABPN1	Q86U42	306 aa	Known RBP eCLIP	46.16	■■■■■ 4.98
PPP1R16A-208	ENST00000529283	BICRA	Q9NZM4	1560 aa		46.14	■■■■■ 4.98
PPP1R16A-208	ENST00000529283	SCRIB	Q14160	1630 aa		46.09	■■■■■ 4.97
PPP1R16A-208	ENST00000529283	SHROOM4	Q9ULL8	1493 aa		45.74	■■■■■ 4.91
PPP1R16A-208	ENST00000529283	DNAJC5B	Q9UF47	199 aa		45.35	■■■■■ 4.85
PPP1R16A-208	ENST00000529283	EIF4G1	Q04637	1599 aa	Known RBP	44.94	■■■■■ 4.78
PPP1R16A-208	ENST00000529283	CC2D2A	Q9P2K1	1620 aa		44.75	■■■■■ 4.75
PPP1R16A-208	ENST00000529283	CECR2	Q9BXF3	1484 aa		44.45	■■■■■ 4.71
PPP1R16A-208	ENST00000529283	SMARCA4	P51532	1647 aa		44.12	■■■■■ 4.65
PPP1R16A-208	ENST00000529283	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	44.09	■■■■■ 4.65
PPP1R16A-208	ENST00000529283	NCAPD3	P42695	1498 aa		43.88	■■■■■ 4.61
PPP1R16A-208	ENST00000529283	ATAD2B	Q9ULI0	1458 aa		43.88	■■■■■ 4.61
PPP1R16A-208	ENST00000529283	SMARCA2	P51531	1590 aa		43.86	■■■■■ 4.61
PPP1R16A-208	ENST00000529283	MROH2B	Q7Z745	1585 aa		43.79	■■■■■ 4.6
PPP1R16A-208	ENST00000529283	PEG3	Q9GZU2	1588 aa		43.72	■■■■■ 4.59
PPP1R16A-208	ENST00000529283	HMGXB3	Q12766	1538 aa		43.68	■■■■■ 4.58
PPP1R16A-208	ENST00000529283	BAZ1B	Q9UIG0	1483 aa	Known RBP	43.52	■■■■■ 4.56
PPP1R16A-208	ENST00000529283	WIZ	O95785	1651 aa		43.31	■■■■■ 4.52
PPP1R16A-208	ENST00000529283	RSF1	Q96T23	1441 aa	Predicted RBP	43.3	■■■■■ 4.52
PPP1R16A-208	ENST00000529283	TOP2A	P11388	1531 aa	Known RBP	42.89	■■■■■ 4.46
PPP1R16A-208	ENST00000529283	NES	P48681	1621 aa		42.76	■■■■■ 4.44
PPP1R16A-208	ENST00000529283	LAMC3	Q9Y6N6	1575 aa		42.73	■■■■■ 4.43
PPP1R16A-208	ENST00000529283	ERCC6	Q03468	1493 aa		42.64	■■■■■ 4.42
PPP1R16A-208	ENST00000529283	CADPS	Q9ULU8	1353 aa		42.59	■■■■■ 4.41
PPP1R16A-208	ENST00000529283	PDS5B	Q9NTI5	1447 aa		42.45	■■■■■ 4.39
PPP1R16A-208	ENST00000529283	CCDC88B	A6NC98	1476 aa		42.36	■■■■■ 4.37
PPP1R16A-208	ENST00000529283	CFTR	P13569	1480 aa		42.34	■■■■■ 4.37
PPP1R16A-208	ENST00000529283	KIF21A	Q7Z4S6	1674 aa		42.29	■■■■■ 4.36
PPP1R16A-208	ENST00000529283	CUX2	O14529	1486 aa		42.23	■■■■■ 4.35
PPP1R16A-208	ENST00000529283	THOC2	Q8NI27	1593 aa	Known RBP	42.17	■■■■■ 4.34
PPP1R16A-208	ENST00000529283	SUPT5H	O00267	1087 aa	Known RBP	42.13	■■■■■ 4.33
PPP1R16A-208	ENST00000529283	FANCD2	Q9BXW9	1451 aa		42.09	■■■■■ 4.33
PPP1R16A-208	ENST00000529283	CEP164	Q9UPV0	1460 aa		42.05	■■■■■ 4.32
PPP1R16A-208	ENST00000529283	PRDM2	Q13029	1718 aa		42.05	■■■■■ 4.32
PPP1R16A-208	ENST00000529283	MRC2	Q9UBG0	1479 aa		41.99	■■■■■ 4.31
PPP1R16A-208	ENST00000529283	WDR62	O43379	1518 aa		41.86	■■■■■ 4.29
PPP1R16A-208	ENST00000529283	URB2	Q14146	1524 aa	Known RBP	41.65	■■■■■ 4.26
PPP1R16A-208	ENST00000529283	ABCC8	Q09428	1581 aa		41.46	■■■■■ 4.23
PPP1R16A-208	ENST00000529283	TOPBP1	Q92547	1522 aa		41.41	■■■■■ 4.22
PPP1R16A-208	ENST00000529283	DNMBP	Q6XZF7	1577 aa		41.38	■■■■■ 4.22
PPP1R16A-208	ENST00000529283	IFT140	Q96RY7	1462 aa		41.18	■■■■■ 4.18
PPP1R16A-208	ENST00000529283	CUX1	P39880	1505 aa		41.08	■■■■■ 4.17
PPP1R16A-208	ENST00000529283	POLA1	P09884	1462 aa	Predicted RBP	41.06	■■■■■ 4.16
PPP1R16A-208	ENST00000529283	TARBP1	Q13395	1621 aa	Known RBP	40.97	■■■■■ 4.15
PPP1R16A-208	ENST00000529283	FGD5	Q6ZNL6	1462 aa		40.96	■■■■■ 4.15
PPP1R16A-208	ENST00000529283	ZNF608	Q9ULD9	1512 aa	Predicted RBP	40.95	■■■■■ 4.15
PPP1R16A-208	ENST00000529283	DNAJC5	Q9H3Z4	198 aa		40.92	■■■■■ 4.14
PPP1R16A-208	ENST00000529283	SOGA1	O94964	1423 aa		40.89	■■■■■ 4.14
PPP1R16A-208	ENST00000529283	RAD54L2	Q9Y4B4	1467 aa		40.85	■■■■■ 4.13
PPP1R16A-208	ENST00000529283	WRN	Q14191	1432 aa	Predicted RBP eCLIP	40.84	■■■■■ 4.13
PPP1R16A-208	ENST00000529283	EIF4G3	O43432	1585 aa	Known RBP	40.82	■■■■■ 4.12
PPP1R16A-208	ENST00000529283	TOP2B	Q02880	1626 aa		40.76	■■■■■ 4.12
PPP1R16A-208	ENST00000529283	BIVM-ERCC5	R4GMW8	1640 aa		40.76	■■■■■ 4.12
PPP1R16A-208	ENST00000529283	SYNJ1	O43426	1573 aa		40.72	■■■■■ 4.11
PPP1R16A-208	ENST00000529283	WDR97	A6NE52	1622 aa		40.71	■■■■■ 4.11
PPP1R16A-208	ENST00000529283	AQR	O60306	1485 aa	Known RBP eCLIP	40.71	■■■■■ 4.11
PPP1R16A-208	ENST00000529283	TDRD9	Q8NDG6	1382 aa	Known RBP	40.63	■■■■■ 4.1
PPP1R16A-208	ENST00000529283	ABCA10	Q8WWZ4	1543 aa		40.58	■■■■■ 4.09
PPP1R16A-208	ENST00000529283	OSCAR	Q8IYS5	282 aa		40.46	■■■■■ 4.07
PPP1R16A-208	ENST00000529283	GRIN2B	Q13224	1484 aa		40.44	■■■■■ 4.06
PPP1R16A-208	ENST00000529283	GAPVD1	Q14C86	1478 aa		40.43	■■■■■ 4.06
PPP1R16A-208	ENST00000529283	ABCA5	Q8WWZ7	1642 aa		40.42	■■■■■ 4.06
PPP1R16A-208	ENST00000529283	SNAPC4	Q5SXM2	1469 aa		40.35	■■■■■ 4.05
PPP1R16A-208	ENST00000529283	PBRM1	Q86U86	1689 aa		40.34	■■■■■ 4.05
PPP1R16A-208	ENST00000529283	MAGI1	Q96QZ7	1491 aa	Predicted RBP	40.34	■■■■■ 4.05
PPP1R16A-208	ENST00000529283	CHD1	O14646	1710 aa		40.3	■■■■■ 4.04
PPP1R16A-208	ENST00000529283	FBLN2	P98095	1184 aa		40.21	■■■■■ 4.03
PPP1R16A-208	ENST00000529283	SYNJ2	O15056	1496 aa		40.18	■■■■■ 4.02
PPP1R16A-208	ENST00000529283	CHMP7	Q8WUX9	453 aa	Predicted RBP	40.14	■■■■■ 4.02
PPP1R16A-208	ENST00000529283	ERICH3	Q5RHP9	1530 aa		40.11	■■■■■ 4.01
PPP1R16A-208	ENST00000529283	ADAMTS12	P58397	1594 aa		40.03	■■■■■ 4
PPP1R16A-208	ENST00000529283	KIF27	Q86VH2	1401 aa		39.99	■■■■□ 3.99
PPP1R16A-208	ENST00000529283	FHAD1	B1AJZ9	1412 aa		39.97	■■■■□ 3.99
PPP1R16A-208	ENST00000529283	GRIN2A	Q12879	1464 aa		39.9	■■■■□ 3.98
PPP1R16A-208	ENST00000529283	CLASP1	Q7Z460	1538 aa		39.88	■■■■□ 3.97
PPP1R16A-208	ENST00000529283	TRIM41	Q8WV44	630 aa		39.84	■■■■□ 3.97
PPP1R16A-208	ENST00000529283	IGF1R	P08069	1367 aa		39.82	■■■■□ 3.96
PPP1R16A-208	ENST00000529283	ARHGEF11	O15085	1522 aa		39.8	■■■■□ 3.96
PPP1R16A-208	ENST00000529283	RIMBP3C	A6NJZ7	1639 aa		39.8	■■■■□ 3.96
PPP1R16A-208	ENST00000529283	RIMBP3B	A6NNM3	1639 aa		39.8	■■■■□ 3.96
PPP1R16A-208	ENST00000529283	RIMBP3	Q9UFD9	1639 aa		39.8	■■■■□ 3.96
PPP1R16A-208	ENST00000529283	CUL7	Q14999	1698 aa		39.76	■■■■□ 3.96
PPP1R16A-208	ENST00000529283	NUP160	Q12769	1436 aa		39.74	■■■■□ 3.95
PPP1R16A-208	ENST00000529283	CEP170	Q5SW79	1584 aa		39.69	■■■■□ 3.94
PPP1R16A-208	ENST00000529283	CARMIL1	Q5VZK9	1371 aa		39.58	■■■■□ 3.93
PPP1R16A-208	ENST00000529283	RUSC2	Q8N2Y8	1516 aa		39.56	■■■■□ 3.92
PPP1R16A-208	ENST00000529283	ARAP1	Q96P48	1450 aa		39.46	■■■■□ 3.91
PPP1R16A-208	ENST00000529283	SHROOM2	Q13796	1616 aa		39.45	■■■■□ 3.91
PPP1R16A-208	ENST00000529283	CYB5RL	Q6IPT4	315 aa		39.4	■■■■□ 3.9
PPP1R16A-208	ENST00000529283	KIAA0586	Q9BVV6	1533 aa		39.36	■■■■□ 3.89

Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms