RNA–Protein interactions for RNA: ENST00000529207.5

SYVN1-211, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-211ENST00000529207 NISCHQ9Y2I1 1504 aa23.26■■□□□ 1.31
SYVN1-211ENST00000529207 ABCC9O60706 1549 aa20.96■□□□□ 0.95
SYVN1-211ENST00000529207 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.94
SYVN1-211ENST00000529207 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
SYVN1-211ENST00000529207 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
SYVN1-211ENST00000529207 NACADO15069 1562 aa19.79■□□□□ 0.76
SYVN1-211ENST00000529207 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
SYVN1-211ENST00000529207 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.73
SYVN1-211ENST00000529207 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
SYVN1-211ENST00000529207 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
SYVN1-211ENST00000529207 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
SYVN1-211ENST00000529207 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
SYVN1-211ENST00000529207 DCAF1Q9Y4B6 1507 aa19.22■□□□□ 0.67
SYVN1-211ENST00000529207 SHROOM4Q9ULL8 1493 aa19.12■□□□□ 0.65
SYVN1-211ENST00000529207 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
SYVN1-211ENST00000529207 CC2D2AQ9P2K1 1620 aa18.93■□□□□ 0.62
SYVN1-211ENST00000529207 DNAJC5Q9H3Z4 198 aa18.91■□□□□ 0.62
SYVN1-211ENST00000529207 CECR2Q9BXF3 1484 aa18.89■□□□□ 0.61
SYVN1-211ENST00000529207 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
SYVN1-211ENST00000529207 NCAPD3P42695 1498 aa18.24■□□□□ 0.51
SYVN1-211ENST00000529207 ATAD2BQ9ULI0 1458 aa18.18■□□□□ 0.5
SYVN1-211ENST00000529207 SMARCA4P51532 1647 aa18.17■□□□□ 0.5
SYVN1-211ENST00000529207 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
SYVN1-211ENST00000529207 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
SYVN1-211ENST00000529207 HMGXB3Q12766 1538 aa18.14■□□□□ 0.49
SYVN1-211ENST00000529207 CUX2O14529 1486 aa18.14■□□□□ 0.49
SYVN1-211ENST00000529207 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
SYVN1-211ENST00000529207 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
SYVN1-211ENST00000529207 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
SYVN1-211ENST00000529207 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
SYVN1-211ENST00000529207 NESP48681 1621 aa17.97■□□□□ 0.47
SYVN1-211ENST00000529207 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
SYVN1-211ENST00000529207 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
SYVN1-211ENST00000529207 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.45
SYVN1-211ENST00000529207 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.44
SYVN1-211ENST00000529207 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
SYVN1-211ENST00000529207 WIZO95785 1651 aa17.71■□□□□ 0.42
SYVN1-211ENST00000529207 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
SYVN1-211ENST00000529207 MRC2Q9UBG0 1479 aa17.62■□□□□ 0.41
SYVN1-211ENST00000529207 WDR62O43379 1518 aa17.57■□□□□ 0.4
SYVN1-211ENST00000529207 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
SYVN1-211ENST00000529207 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
SYVN1-211ENST00000529207 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
SYVN1-211ENST00000529207 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
SYVN1-211ENST00000529207 CFTRP13569 1480 aa17.48■□□□□ 0.39
SYVN1-211ENST00000529207 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
SYVN1-211ENST00000529207 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
SYVN1-211ENST00000529207 URB2Q14146 1524 aaKnown RBP17.35■□□□□ 0.37
SYVN1-211ENST00000529207 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
SYVN1-211ENST00000529207 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
SYVN1-211ENST00000529207 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
SYVN1-211ENST00000529207 CYB5RLQ6IPT4 315 aa17.17■□□□□ 0.34
SYVN1-211ENST00000529207 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
SYVN1-211ENST00000529207 AEBP2Q6ZN18 517 aaPredicted RBP17.16■□□□□ 0.34
SYVN1-211ENST00000529207 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
SYVN1-211ENST00000529207 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
SYVN1-211ENST00000529207 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
SYVN1-211ENST00000529207 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
SYVN1-211ENST00000529207 RIMBP3CA6NJZ7 1639 aa17.04■□□□□ 0.32
SYVN1-211ENST00000529207 RIMBP3BA6NNM3 1639 aa17.04■□□□□ 0.32
SYVN1-211ENST00000529207 RIMBP3Q9UFD9 1639 aa17.04■□□□□ 0.32
SYVN1-211ENST00000529207 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.31
SYVN1-211ENST00000529207 FBLN2P98095 1184 aa17.01■□□□□ 0.31
SYVN1-211ENST00000529207 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
SYVN1-211ENST00000529207 ARHGEF11O15085 1522 aa16.98■□□□□ 0.31
SYVN1-211ENST00000529207 CHD1O14646 1710 aa16.97■□□□□ 0.31
SYVN1-211ENST00000529207 AQRO60306 1485 aaKnown RBP eCLIP16.97■□□□□ 0.312e-9■■■■□ 22.2
SYVN1-211ENST00000529207 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
SYVN1-211ENST00000529207 SOGA1O94964 1423 aa16.89■□□□□ 0.29
SYVN1-211ENST00000529207 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
SYVN1-211ENST00000529207 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
SYVN1-211ENST00000529207 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
SYVN1-211ENST00000529207 CUX1P39880 1505 aa16.84■□□□□ 0.29
SYVN1-211ENST00000529207 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
SYVN1-211ENST00000529207 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
SYVN1-211ENST00000529207 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
SYVN1-211ENST00000529207 GRIN2BQ13224 1484 aa16.78■□□□□ 0.28
SYVN1-211ENST00000529207 SYNJ1O43426 1573 aa16.77■□□□□ 0.27
SYVN1-211ENST00000529207 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
SYVN1-211ENST00000529207 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
SYVN1-211ENST00000529207 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
SYVN1-211ENST00000529207 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
SYVN1-211ENST00000529207 GAPVD1Q14C86 1478 aa16.7■□□□□ 0.26
SYVN1-211ENST00000529207 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
SYVN1-211ENST00000529207 ABCA10Q8WWZ4 1543 aa16.68■□□□□ 0.26
SYVN1-211ENST00000529207 ABCA5Q8WWZ7 1642 aa16.67■□□□□ 0.26
SYVN1-211ENST00000529207 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
SYVN1-211ENST00000529207 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
SYVN1-211ENST00000529207 TOP2BQ02880 1626 aa16.57■□□□□ 0.24
SYVN1-211ENST00000529207 ADAMTS12P58397 1594 aa16.56■□□□□ 0.24
SYVN1-211ENST00000529207 GRIN2AQ12879 1464 aa16.56■□□□□ 0.24
SYVN1-211ENST00000529207 CEP170Q5SW79 1584 aa16.5■□□□□ 0.23
SYVN1-211ENST00000529207 FHAD1B1AJZ9 1412 aa16.49■□□□□ 0.23
SYVN1-211ENST00000529207 NUP160Q12769 1436 aa16.49■□□□□ 0.23
SYVN1-211ENST00000529207 ERICH3Q5RHP9 1530 aa16.48■□□□□ 0.23
SYVN1-211ENST00000529207 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
SYVN1-211ENST00000529207 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
SYVN1-211ENST00000529207 PRG4Q92954 1404 aaPredicted RBP16.34■□□□□ 0.21
SYVN1-211ENST00000529207 RUSC2Q8N2Y8 1516 aa16.34■□□□□ 0.21
SYVN1-211ENST00000529207 ILDR1Q86SU0 546 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms