RNA–Protein interactions for RNA: ENST00000528812.5

FDFT1-214, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-214ENST00000528812 NISCHQ9Y2I1 1504 aa33.21■■■□□ 2.91
FDFT1-214ENST00000528812 CCDC180Q9P1Z9 1646 aa29.47■■■□□ 2.31
FDFT1-214ENST00000528812 ABCC9O60706 1549 aa28.92■■■□□ 2.22
FDFT1-214ENST00000528812 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.05
FDFT1-214ENST00000528812 RB1CC1Q8TDY2 1594 aa27.76■■■□□ 2.03
FDFT1-214ENST00000528812 NACADO15069 1562 aa27.72■■■□□ 2.03
FDFT1-214ENST00000528812 ZCCHC6Q5VYS8 1495 aaKnown RBP27.65■■■□□ 2.02
FDFT1-214ENST00000528812 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
FDFT1-214ENST00000528812 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
FDFT1-214ENST00000528812 UNC13AQ9UPW8 1703 aa27.16■■□□□ 1.94
FDFT1-214ENST00000528812 PABPN1Q86U42 306 aaKnown RBP eCLIP27.06■■□□□ 1.92
FDFT1-214ENST00000528812 SCRIBQ14160 1630 aa26.99■■□□□ 1.91
FDFT1-214ENST00000528812 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
FDFT1-214ENST00000528812 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
FDFT1-214ENST00000528812 DNAJC5BQ9UF47 199 aa26.53■■□□□ 1.84
FDFT1-214ENST00000528812 EIF4G1Q04637 1599 aaKnown RBP26.23■■□□□ 1.79
FDFT1-214ENST00000528812 CC2D2AQ9P2K1 1620 aa26.13■■□□□ 1.77
FDFT1-214ENST00000528812 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
FDFT1-214ENST00000528812 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
FDFT1-214ENST00000528812 BAZ1AQ9NRL2 1556 aaPredicted RBP25.73■■□□□ 1.71
FDFT1-214ENST00000528812 MROH2BQ7Z745 1585 aa25.62■■□□□ 1.69
FDFT1-214ENST00000528812 ATAD2BQ9ULI0 1458 aa25.62■■□□□ 1.69
FDFT1-214ENST00000528812 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
FDFT1-214ENST00000528812 SMARCA2P51531 1590 aa25.58■■□□□ 1.68
FDFT1-214ENST00000528812 PEG3Q9GZU2 1588 aa25.47■■□□□ 1.67
FDFT1-214ENST00000528812 HMGXB3Q12766 1538 aa25.45■■□□□ 1.66
FDFT1-214ENST00000528812 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
FDFT1-214ENST00000528812 WIZO95785 1651 aa25.36■■□□□ 1.65
FDFT1-214ENST00000528812 RSF1Q96T23 1441 aaPredicted RBP25.33■■□□□ 1.65
FDFT1-214ENST00000528812 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
FDFT1-214ENST00000528812 NESP48681 1621 aa25.03■■□□□ 1.6
FDFT1-214ENST00000528812 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
FDFT1-214ENST00000528812 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
FDFT1-214ENST00000528812 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
FDFT1-214ENST00000528812 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
FDFT1-214ENST00000528812 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
FDFT1-214ENST00000528812 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
FDFT1-214ENST00000528812 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
FDFT1-214ENST00000528812 CFTRP13569 1480 aa24.7■■□□□ 1.55
FDFT1-214ENST00000528812 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
FDFT1-214ENST00000528812 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
FDFT1-214ENST00000528812 CUX2O14529 1486 aa24.57■■□□□ 1.52
FDFT1-214ENST00000528812 CEP164Q9UPV0 1460 aa24.55■■□□□ 1.52
FDFT1-214ENST00000528812 PRDM2Q13029 1718 aa24.52■■□□□ 1.52
FDFT1-214ENST00000528812 MRC2Q9UBG0 1479 aa24.5■■□□□ 1.51
FDFT1-214ENST00000528812 WDR62O43379 1518 aa24.4■■□□□ 1.5
FDFT1-214ENST00000528812 URB2Q14146 1524 aaKnown RBP24.34■■□□□ 1.49
FDFT1-214ENST00000528812 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
FDFT1-214ENST00000528812 ABCC8Q09428 1581 aa24.15■■□□□ 1.46
FDFT1-214ENST00000528812 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
FDFT1-214ENST00000528812 CUX1P39880 1505 aa24.03■■□□□ 1.44
FDFT1-214ENST00000528812 IFT140Q96RY7 1462 aa24.01■■□□□ 1.43
FDFT1-214ENST00000528812 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
FDFT1-214ENST00000528812 ZNF608Q9ULD9 1512 aaPredicted RBP23.96■■□□□ 1.43
FDFT1-214ENST00000528812 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
FDFT1-214ENST00000528812 RAD54L2Q9Y4B4 1467 aa23.92■■□□□ 1.42
FDFT1-214ENST00000528812 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
FDFT1-214ENST00000528812 SOGA1O94964 1423 aa23.91■■□□□ 1.42
FDFT1-214ENST00000528812 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.42
FDFT1-214ENST00000528812 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
FDFT1-214ENST00000528812 DNAJC5Q9H3Z4 198 aa23.84■■□□□ 1.41
FDFT1-214ENST00000528812 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
FDFT1-214ENST00000528812 AQRO60306 1485 aaKnown RBP eCLIP23.83■■□□□ 1.414e-7■■■■□ 24.3
FDFT1-214ENST00000528812 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
FDFT1-214ENST00000528812 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
FDFT1-214ENST00000528812 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
FDFT1-214ENST00000528812 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
FDFT1-214ENST00000528812 ABCA10Q8WWZ4 1543 aa23.69■■□□□ 1.38
FDFT1-214ENST00000528812 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
FDFT1-214ENST00000528812 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
FDFT1-214ENST00000528812 FBLN2P98095 1184 aa23.6■■□□□ 1.37
FDFT1-214ENST00000528812 GRIN2BQ13224 1484 aa23.6■■□□□ 1.37
FDFT1-214ENST00000528812 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
FDFT1-214ENST00000528812 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
FDFT1-214ENST00000528812 PBRM1Q86U86 1689 aa23.57■■□□□ 1.36
FDFT1-214ENST00000528812 CHD1O14646 1710 aa23.55■■□□□ 1.36
FDFT1-214ENST00000528812 MAGI1Q96QZ7 1491 aaPredicted RBP23.53■■□□□ 1.36
FDFT1-214ENST00000528812 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
FDFT1-214ENST00000528812 SYNJ2O15056 1496 aa23.45■■□□□ 1.34
FDFT1-214ENST00000528812 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
FDFT1-214ENST00000528812 ERICH3Q5RHP9 1530 aa23.4■■□□□ 1.34
FDFT1-214ENST00000528812 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
FDFT1-214ENST00000528812 ADAMTS12P58397 1594 aa23.37■■□□□ 1.33
FDFT1-214ENST00000528812 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.33
FDFT1-214ENST00000528812 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
FDFT1-214ENST00000528812 IGF1RP08069 1367 aa23.28■■□□□ 1.32
FDFT1-214ENST00000528812 CLASP1Q7Z460 1538 aa23.25■■□□□ 1.31
FDFT1-214ENST00000528812 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
FDFT1-214ENST00000528812 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
FDFT1-214ENST00000528812 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
FDFT1-214ENST00000528812 ARHGEF11O15085 1522 aa23.22■■□□□ 1.31
FDFT1-214ENST00000528812 RUSC2Q8N2Y8 1516 aa23.22■■□□□ 1.31
FDFT1-214ENST00000528812 CUL7Q14999 1698 aa23.2■■□□□ 1.3
FDFT1-214ENST00000528812 CEP170Q5SW79 1584 aa23.2■■□□□ 1.3
FDFT1-214ENST00000528812 NUP160Q12769 1436 aa23.18■■□□□ 1.3
FDFT1-214ENST00000528812 CARMIL1Q5VZK9 1371 aa23.16■■□□□ 1.3
FDFT1-214ENST00000528812 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
FDFT1-214ENST00000528812 CYB5RLQ6IPT4 315 aa23.07■■□□□ 1.28
FDFT1-214ENST00000528812 ARAP1Q96P48 1450 aa23.03■■□□□ 1.28
FDFT1-214ENST00000528812 RAPGEF2Q9Y4G8 1499 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms