RNA–Protein interactions for RNA: ENST00000528555.5

SNX19-207, Transcript of sorting nexin 19, humanhuman

TSL 2 BASIC

Gene SNX19, Length 1,506 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-207ENST00000528555 NISCHQ9Y2I1 1504 aa40.57■■■■■ 4.09
SNX19-207ENST00000528555 CCDC180Q9P1Z9 1646 aa36.05■■■■□ 3.36
SNX19-207ENST00000528555 ABCC9O60706 1549 aa35.26■■■■□ 3.24
SNX19-207ENST00000528555 RB1CC1Q8TDY2 1594 aa33.96■■■■□ 3.03
SNX19-207ENST00000528555 DCAF8L2P0C7V8 631 aa33.94■■■■□ 3.02
SNX19-207ENST00000528555 NACADO15069 1562 aa33.93■■■■□ 3.02
SNX19-207ENST00000528555 ZCCHC6Q5VYS8 1495 aaKnown RBP33.79■■■■□ 3
SNX19-207ENST00000528555 MYO15BQ96JP2 1530 aa33.75■■■□□ 2.99
SNX19-207ENST00000528555 DCAF1Q9Y4B6 1507 aa33.59■■■□□ 2.97
SNX19-207ENST00000528555 UNC13AQ9UPW8 1703 aa33.07■■■□□ 2.88
SNX19-207ENST00000528555 PABPN1Q86U42 306 aaKnown RBP eCLIP32.97■■■□□ 2.87
SNX19-207ENST00000528555 BICRAQ9NZM4 1560 aa32.87■■■□□ 2.85
SNX19-207ENST00000528555 SCRIBQ14160 1630 aa32.87■■■□□ 2.85
SNX19-207ENST00000528555 SHROOM4Q9ULL8 1493 aa32.62■■■□□ 2.81
SNX19-207ENST00000528555 DNAJC5BQ9UF47 199 aa32.35■■■□□ 2.77
SNX19-207ENST00000528555 EIF4G1Q04637 1599 aaKnown RBP32.03■■■□□ 2.72
SNX19-207ENST00000528555 CC2D2AQ9P2K1 1620 aa31.89■■■□□ 2.7
SNX19-207ENST00000528555 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.67
SNX19-207ENST00000528555 BAZ1AQ9NRL2 1556 aaPredicted RBP31.46■■■□□ 2.63
SNX19-207ENST00000528555 SMARCA4P51532 1647 aa31.45■■■□□ 2.63
SNX19-207ENST00000528555 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
SNX19-207ENST00000528555 ATAD2BQ9ULI0 1458 aa31.31■■■□□ 2.6
SNX19-207ENST00000528555 SMARCA2P51531 1590 aa31.29■■■□□ 2.6
SNX19-207ENST00000528555 MROH2BQ7Z745 1585 aa31.24■■■□□ 2.59
SNX19-207ENST00000528555 PEG3Q9GZU2 1588 aa31.17■■■□□ 2.58
SNX19-207ENST00000528555 HMGXB3Q12766 1538 aa31.14■■■□□ 2.58
SNX19-207ENST00000528555 BAZ1BQ9UIG0 1483 aaKnown RBP31.06■■■□□ 2.56
SNX19-207ENST00000528555 RSF1Q96T23 1441 aaPredicted RBP30.92■■■□□ 2.54
SNX19-207ENST00000528555 WIZO95785 1651 aa30.88■■■□□ 2.53
SNX19-207ENST00000528555 TOP2AP11388 1531 aaKnown RBP30.6■■■□□ 2.49
SNX19-207ENST00000528555 NESP48681 1621 aa30.5■■■□□ 2.47
SNX19-207ENST00000528555 LAMC3Q9Y6N6 1575 aa30.47■■■□□ 2.47
SNX19-207ENST00000528555 ERCC6Q03468 1493 aa30.43■■■□□ 2.46
SNX19-207ENST00000528555 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
SNX19-207ENST00000528555 PDS5BQ9NTI5 1447 aa30.31■■■□□ 2.44
SNX19-207ENST00000528555 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
SNX19-207ENST00000528555 CFTRP13569 1480 aa30.22■■■□□ 2.43
SNX19-207ENST00000528555 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
SNX19-207ENST00000528555 CUX2O14529 1486 aa30.11■■■□□ 2.41
SNX19-207ENST00000528555 KIF21AQ7Z4S6 1674 aa30.1■■■□□ 2.41
SNX19-207ENST00000528555 FANCD2Q9BXW9 1451 aa30.04■■■□□ 2.4
SNX19-207ENST00000528555 THOC2Q8NI27 1593 aaKnown RBP30.02■■■□□ 2.4
SNX19-207ENST00000528555 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.39
SNX19-207ENST00000528555 MRC2Q9UBG0 1479 aa29.96■■■□□ 2.39
SNX19-207ENST00000528555 PRDM2Q13029 1718 aa29.9■■■□□ 2.38
SNX19-207ENST00000528555 WDR62O43379 1518 aa29.84■■■□□ 2.37
SNX19-207ENST00000528555 URB2Q14146 1524 aaKnown RBP29.71■■■□□ 2.35
SNX19-207ENST00000528555 ABCC8Q09428 1581 aa29.61■■■□□ 2.33
SNX19-207ENST00000528555 TOPBP1Q92547 1522 aa29.55■■■□□ 2.32
SNX19-207ENST00000528555 DNMBPQ6XZF7 1577 aa29.52■■■□□ 2.32
SNX19-207ENST00000528555 IFT140Q96RY7 1462 aa29.39■■■□□ 2.3
SNX19-207ENST00000528555 CUX1P39880 1505 aa29.31■■■□□ 2.28
SNX19-207ENST00000528555 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
SNX19-207ENST00000528555 FGD5Q6ZNL6 1462 aa29.23■■■□□ 2.27
SNX19-207ENST00000528555 SOGA1O94964 1423 aa29.21■■■□□ 2.27
SNX19-207ENST00000528555 ZNF608Q9ULD9 1512 aaPredicted RBP29.2■■■□□ 2.27
SNX19-207ENST00000528555 TARBP1Q13395 1621 aaKnown RBP29.2■■■□□ 2.26
SNX19-207ENST00000528555 DNAJC5Q9H3Z4 198 aa29.2■■■□□ 2.26
SNX19-207ENST00000528555 WRNQ14191 1432 aaPredicted RBP eCLIP29.17■■■□□ 2.26
SNX19-207ENST00000528555 RAD54L2Q9Y4B4 1467 aa29.16■■■□□ 2.26
SNX19-207ENST00000528555 EIF4G3O43432 1585 aaKnown RBP29.08■■■□□ 2.25
SNX19-207ENST00000528555 TOP2BQ02880 1626 aa29.07■■■□□ 2.24
SNX19-207ENST00000528555 AQRO60306 1485 aaKnown RBP eCLIP29.07■■■□□ 2.24
SNX19-207ENST00000528555 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
SNX19-207ENST00000528555 SYNJ1O43426 1573 aa29.04■■■□□ 2.24
SNX19-207ENST00000528555 TDRD9Q8NDG6 1382 aaKnown RBP29.03■■■□□ 2.24
SNX19-207ENST00000528555 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
SNX19-207ENST00000528555 ABCA10Q8WWZ4 1543 aa28.96■■■□□ 2.23
SNX19-207ENST00000528555 OSCARQ8IYS5 282 aa28.91■■■□□ 2.22
SNX19-207ENST00000528555 GRIN2BQ13224 1484 aa28.86■■■□□ 2.21
SNX19-207ENST00000528555 GAPVD1Q14C86 1478 aa28.86■■■□□ 2.21
SNX19-207ENST00000528555 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
SNX19-207ENST00000528555 SNAPC4Q5SXM2 1469 aa28.79■■■□□ 2.2
SNX19-207ENST00000528555 MAGI1Q96QZ7 1491 aaPredicted RBP28.79■■■□□ 2.2
SNX19-207ENST00000528555 FBLN2P98095 1184 aa28.75■■■□□ 2.19
SNX19-207ENST00000528555 PBRM1Q86U86 1689 aa28.73■■■□□ 2.19
SNX19-207ENST00000528555 CHMP7Q8WUX9 453 aaPredicted RBP28.7■■■□□ 2.19
SNX19-207ENST00000528555 CHD1O14646 1710 aa28.69■■■□□ 2.18
SNX19-207ENST00000528555 SYNJ2O15056 1496 aa28.68■■■□□ 2.18
SNX19-207ENST00000528555 CHIC1Q5VXU3 224 aa28.67■■■□□ 2.18
SNX19-207ENST00000528555 ERICH3Q5RHP9 1530 aa28.62■■■□□ 2.17
SNX19-207ENST00000528555 KIF27Q86VH2 1401 aa28.58■■■□□ 2.17
SNX19-207ENST00000528555 FHAD1B1AJZ9 1412 aa28.55■■■□□ 2.16
SNX19-207ENST00000528555 ADAMTS12P58397 1594 aa28.53■■■□□ 2.16
SNX19-207ENST00000528555 TRIM41Q8WV44 630 aa28.53■■■□□ 2.16
SNX19-207ENST00000528555 GRIN2AQ12879 1464 aa28.47■■■□□ 2.15
SNX19-207ENST00000528555 IGF1RP08069 1367 aa28.45■■■□□ 2.15
SNX19-207ENST00000528555 CLASP1Q7Z460 1538 aa28.41■■■□□ 2.14
SNX19-207ENST00000528555 ARHGEF11O15085 1522 aa28.37■■■□□ 2.13
SNX19-207ENST00000528555 NUP160Q12769 1436 aa28.36■■■□□ 2.13
SNX19-207ENST00000528555 CUL7Q14999 1698 aa28.34■■■□□ 2.13
SNX19-207ENST00000528555 RIMBP3CA6NJZ7 1639 aa28.34■■■□□ 2.13
SNX19-207ENST00000528555 RIMBP3BA6NNM3 1639 aa28.34■■■□□ 2.13
SNX19-207ENST00000528555 RIMBP3Q9UFD9 1639 aa28.34■■■□□ 2.13
SNX19-207ENST00000528555 CEP170Q5SW79 1584 aa28.29■■■□□ 2.12
SNX19-207ENST00000528555 CARMIL1Q5VZK9 1371 aa28.29■■■□□ 2.12
SNX19-207ENST00000528555 RUSC2Q8N2Y8 1516 aa28.25■■■□□ 2.11
SNX19-207ENST00000528555 CYB5RLQ6IPT4 315 aa28.14■■■□□ 2.1
SNX19-207ENST00000528555 ARAP1Q96P48 1450 aa28.13■■■□□ 2.09
SNX19-207ENST00000528555 RAPGEF2Q9Y4G8 1499 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms