RNA–Protein interactions for RNA: ENST00000528050.1

VPS51-205, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 426 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-205ENST00000528050 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
VPS51-205ENST00000528050 CCDC180Q9P1Z9 1646 aa20.79■□□□□ 0.92
VPS51-205ENST00000528050 ABCC9O60706 1549 aa20.55■□□□□ 0.88
VPS51-205ENST00000528050 RB1CC1Q8TDY2 1594 aa19.69■□□□□ 0.74
VPS51-205ENST00000528050 DCAF8L2P0C7V8 631 aa19.55■□□□□ 0.72
VPS51-205ENST00000528050 NACADO15069 1562 aa19.54■□□□□ 0.72
VPS51-205ENST00000528050 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
VPS51-205ENST00000528050 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
VPS51-205ENST00000528050 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
VPS51-205ENST00000528050 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
VPS51-205ENST00000528050 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
VPS51-205ENST00000528050 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
VPS51-205ENST00000528050 SCRIBQ14160 1630 aa18.97■□□□□ 0.63
VPS51-205ENST00000528050 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
VPS51-205ENST00000528050 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
VPS51-205ENST00000528050 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
VPS51-205ENST00000528050 EIF4G1Q04637 1599 aaKnown RBP18.58■□□□□ 0.56
VPS51-205ENST00000528050 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
VPS51-205ENST00000528050 SMARCA4P51532 1647 aa18.07■□□□□ 0.48
VPS51-205ENST00000528050 SMARCA2P51531 1590 aa18■□□□□ 0.47
VPS51-205ENST00000528050 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
VPS51-205ENST00000528050 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
VPS51-205ENST00000528050 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
VPS51-205ENST00000528050 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
VPS51-205ENST00000528050 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
VPS51-205ENST00000528050 PEG3Q9GZU2 1588 aa17.82■□□□□ 0.44
VPS51-205ENST00000528050 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
VPS51-205ENST00000528050 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
VPS51-205ENST00000528050 WIZO95785 1651 aa17.69■□□□□ 0.42
VPS51-205ENST00000528050 NESP48681 1621 aa17.66■□□□□ 0.42
VPS51-205ENST00000528050 LAMC3Q9Y6N6 1575 aa17.64■□□□□ 0.41
VPS51-205ENST00000528050 CUX2O14529 1486 aa17.63■□□□□ 0.41
VPS51-205ENST00000528050 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.4
VPS51-205ENST00000528050 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
VPS51-205ENST00000528050 PDS5BQ9NTI5 1447 aa17.5■□□□□ 0.39
VPS51-205ENST00000528050 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
VPS51-205ENST00000528050 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
VPS51-205ENST00000528050 CADPSQ9ULU8 1353 aa17.44■□□□□ 0.38
VPS51-205ENST00000528050 PRDM2Q13029 1718 aa17.36■□□□□ 0.37
VPS51-205ENST00000528050 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
VPS51-205ENST00000528050 CEP164Q9UPV0 1460 aa17.35■□□□□ 0.37
VPS51-205ENST00000528050 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
VPS51-205ENST00000528050 FANCD2Q9BXW9 1451 aa17.3■□□□□ 0.36
VPS51-205ENST00000528050 WDR62O43379 1518 aa17.28■□□□□ 0.36
VPS51-205ENST00000528050 CFTRP13569 1480 aa17.27■□□□□ 0.36
VPS51-205ENST00000528050 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
VPS51-205ENST00000528050 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
VPS51-205ENST00000528050 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
VPS51-205ENST00000528050 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
VPS51-205ENST00000528050 TOPBP1Q92547 1522 aa16.98■□□□□ 0.31
VPS51-205ENST00000528050 SUPT5HO00267 1087 aaKnown RBP16.96■□□□□ 0.31
VPS51-205ENST00000528050 IFT140Q96RY7 1462 aa16.96■□□□□ 0.31
VPS51-205ENST00000528050 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.3
VPS51-205ENST00000528050 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
VPS51-205ENST00000528050 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
VPS51-205ENST00000528050 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
VPS51-205ENST00000528050 POLA1P09884 1462 aaPredicted RBP16.81■□□□□ 0.28
VPS51-205ENST00000528050 CHD1O14646 1710 aa16.79■□□□□ 0.28
VPS51-205ENST00000528050 TRIM41Q8WV44 630 aa16.78■□□□□ 0.28
VPS51-205ENST00000528050 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
VPS51-205ENST00000528050 AQRO60306 1485 aaKnown RBP eCLIP16.74■□□□□ 0.278e-7■■■■■ 28.7
VPS51-205ENST00000528050 RAD54L2Q9Y4B4 1467 aa16.74■□□□□ 0.27
VPS51-205ENST00000528050 CUX1P39880 1505 aa16.74■□□□□ 0.27
VPS51-205ENST00000528050 SOGA1O94964 1423 aa16.73■□□□□ 0.27
VPS51-205ENST00000528050 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
VPS51-205ENST00000528050 FBLN2P98095 1184 aa16.7■□□□□ 0.26
VPS51-205ENST00000528050 PBRM1Q86U86 1689 aa16.68■□□□□ 0.26
VPS51-205ENST00000528050 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
VPS51-205ENST00000528050 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
VPS51-205ENST00000528050 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
VPS51-205ENST00000528050 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
VPS51-205ENST00000528050 SNAPC4Q5SXM2 1469 aa16.64■□□□□ 0.25
VPS51-205ENST00000528050 GRIN2BQ13224 1484 aa16.6■□□□□ 0.25
VPS51-205ENST00000528050 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
VPS51-205ENST00000528050 MAGI1Q96QZ7 1491 aaPredicted RBP16.59■□□□□ 0.25
VPS51-205ENST00000528050 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
VPS51-205ENST00000528050 TOP2BQ02880 1626 aa16.57■□□□□ 0.24
VPS51-205ENST00000528050 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
VPS51-205ENST00000528050 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
VPS51-205ENST00000528050 GAPVD1Q14C86 1478 aa16.56■□□□□ 0.24
VPS51-205ENST00000528050 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
VPS51-205ENST00000528050 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
VPS51-205ENST00000528050 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
VPS51-205ENST00000528050 SYNJ2O15056 1496 aa16.52■□□□□ 0.23
VPS51-205ENST00000528050 CLASP1Q7Z460 1538 aa16.45■□□□□ 0.22
VPS51-205ENST00000528050 ADAMTS12P58397 1594 aa16.44■□□□□ 0.22
VPS51-205ENST00000528050 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
VPS51-205ENST00000528050 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
VPS51-205ENST00000528050 GRIN2AQ12879 1464 aa16.38■□□□□ 0.21
VPS51-205ENST00000528050 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
VPS51-205ENST00000528050 FHAD1B1AJZ9 1412 aa16.35■□□□□ 0.21
VPS51-205ENST00000528050 CEP170Q5SW79 1584 aa16.33■□□□□ 0.2
VPS51-205ENST00000528050 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
VPS51-205ENST00000528050 CUL7Q14999 1698 aa16.27■□□□□ 0.19
VPS51-205ENST00000528050 NUP160Q12769 1436 aa16.26■□□□□ 0.19
VPS51-205ENST00000528050 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
VPS51-205ENST00000528050 SHROOM2Q13796 1616 aa16.23■□□□□ 0.19
VPS51-205ENST00000528050 RUSC2Q8N2Y8 1516 aa16.21■□□□□ 0.19
VPS51-205ENST00000528050 ERCC6L2Q5T890 1561 aa16.21■□□□□ 0.18
VPS51-205ENST00000528050 PRG4Q92954 1404 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms