RNA–Protein interactions for RNA: ENST00000527829.1

SLC39A13-207, Transcript of solute carrier family 39 member 13, humanhuman

TSL 4

Gene SLC39A13, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A13-207ENST00000527829 NISCHQ9Y2I1 1504 aa33.54■■■□□ 2.96
SLC39A13-207ENST00000527829 CCDC180Q9P1Z9 1646 aa29.88■■■□□ 2.37
SLC39A13-207ENST00000527829 ABCC9O60706 1549 aa28.97■■■□□ 2.23
SLC39A13-207ENST00000527829 RB1CC1Q8TDY2 1594 aa28.03■■■□□ 2.08
SLC39A13-207ENST00000527829 NACADO15069 1562 aa28.02■■■□□ 2.08
SLC39A13-207ENST00000527829 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
SLC39A13-207ENST00000527829 ZCCHC6Q5VYS8 1495 aaKnown RBP27.96■■■□□ 2.07
SLC39A13-207ENST00000527829 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
SLC39A13-207ENST00000527829 DCAF1Q9Y4B6 1507 aa27.8■■■□□ 2.04
SLC39A13-207ENST00000527829 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
SLC39A13-207ENST00000527829 SCRIBQ14160 1630 aa27.19■■□□□ 1.94
SLC39A13-207ENST00000527829 BICRAQ9NZM4 1560 aa27.06■■□□□ 1.92
SLC39A13-207ENST00000527829 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.92
SLC39A13-207ENST00000527829 SHROOM4Q9ULL8 1493 aa26.92■■□□□ 1.9
SLC39A13-207ENST00000527829 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
SLC39A13-207ENST00000527829 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
SLC39A13-207ENST00000527829 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
SLC39A13-207ENST00000527829 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
SLC39A13-207ENST00000527829 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
SLC39A13-207ENST00000527829 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
SLC39A13-207ENST00000527829 SMARCA2P51531 1590 aa25.87■■□□□ 1.73
SLC39A13-207ENST00000527829 MROH2BQ7Z745 1585 aa25.81■■□□□ 1.72
SLC39A13-207ENST00000527829 ATAD2BQ9ULI0 1458 aa25.8■■□□□ 1.72
SLC39A13-207ENST00000527829 NCAPD3P42695 1498 aa25.78■■□□□ 1.72
SLC39A13-207ENST00000527829 PEG3Q9GZU2 1588 aa25.77■■□□□ 1.72
SLC39A13-207ENST00000527829 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
SLC39A13-207ENST00000527829 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
SLC39A13-207ENST00000527829 WIZO95785 1651 aa25.59■■□□□ 1.69
SLC39A13-207ENST00000527829 RSF1Q96T23 1441 aaPredicted RBP25.55■■□□□ 1.68
SLC39A13-207ENST00000527829 TOP2AP11388 1531 aaKnown RBP25.35■■□□□ 1.65
SLC39A13-207ENST00000527829 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
SLC39A13-207ENST00000527829 NESP48681 1621 aa25.07■■□□□ 1.6
SLC39A13-207ENST00000527829 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
SLC39A13-207ENST00000527829 CADPSQ9ULU8 1353 aa25.04■■□□□ 1.6
SLC39A13-207ENST00000527829 SUPT5HO00267 1087 aaKnown RBP25.03■■□□□ 1.6
SLC39A13-207ENST00000527829 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
SLC39A13-207ENST00000527829 PDS5BQ9NTI5 1447 aa24.97■■□□□ 1.59
SLC39A13-207ENST00000527829 CFTRP13569 1480 aa24.91■■□□□ 1.58
SLC39A13-207ENST00000527829 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
SLC39A13-207ENST00000527829 KIF21AQ7Z4S6 1674 aa24.89■■□□□ 1.58
SLC39A13-207ENST00000527829 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
SLC39A13-207ENST00000527829 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
SLC39A13-207ENST00000527829 THOC2Q8NI27 1593 aaKnown RBP24.74■■□□□ 1.55
SLC39A13-207ENST00000527829 CUX2O14529 1486 aa24.72■■□□□ 1.55
SLC39A13-207ENST00000527829 MRC2Q9UBG0 1479 aa24.68■■□□□ 1.54
SLC39A13-207ENST00000527829 WDR62O43379 1518 aa24.59■■□□□ 1.53
SLC39A13-207ENST00000527829 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
SLC39A13-207ENST00000527829 URB2Q14146 1524 aaKnown RBP24.47■■□□□ 1.51
SLC39A13-207ENST00000527829 DNMBPQ6XZF7 1577 aa24.41■■□□□ 1.5
SLC39A13-207ENST00000527829 TOPBP1Q92547 1522 aa24.38■■□□□ 1.49
SLC39A13-207ENST00000527829 IFT140Q96RY7 1462 aa24.23■■□□□ 1.47
SLC39A13-207ENST00000527829 CUX1P39880 1505 aa24.22■■□□□ 1.47
SLC39A13-207ENST00000527829 POLA1P09884 1462 aaPredicted RBP24.17■■□□□ 1.46
SLC39A13-207ENST00000527829 WRNQ14191 1432 aaPredicted RBP eCLIP24.16■■□□□ 1.46
SLC39A13-207ENST00000527829 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.46
SLC39A13-207ENST00000527829 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
SLC39A13-207ENST00000527829 TOP2BQ02880 1626 aa24.11■■□□□ 1.45
SLC39A13-207ENST00000527829 TARBP1Q13395 1621 aaKnown RBP24.11■■□□□ 1.45
SLC39A13-207ENST00000527829 SOGA1O94964 1423 aa24.09■■□□□ 1.45
SLC39A13-207ENST00000527829 SYNJ1O43426 1573 aa24.07■■□□□ 1.44
SLC39A13-207ENST00000527829 WDR97A6NE52 1622 aa24.04■■□□□ 1.44
SLC39A13-207ENST00000527829 EIF4G3O43432 1585 aaKnown RBP24.03■■□□□ 1.44
SLC39A13-207ENST00000527829 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
SLC39A13-207ENST00000527829 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
SLC39A13-207ENST00000527829 ABCA10Q8WWZ4 1543 aa23.92■■□□□ 1.42
SLC39A13-207ENST00000527829 AQRO60306 1485 aaKnown RBP eCLIP23.91■■□□□ 1.422e-6■■■□□ 18.3
SLC39A13-207ENST00000527829 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
SLC39A13-207ENST00000527829 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
SLC39A13-207ENST00000527829 ABCA5Q8WWZ7 1642 aa23.84■■□□□ 1.41
SLC39A13-207ENST00000527829 GAPVD1Q14C86 1478 aa23.83■■□□□ 1.41
SLC39A13-207ENST00000527829 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
SLC39A13-207ENST00000527829 MAGI1Q96QZ7 1491 aaPredicted RBP23.76■■□□□ 1.39
SLC39A13-207ENST00000527829 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
SLC39A13-207ENST00000527829 CHD1O14646 1710 aa23.73■■□□□ 1.39
SLC39A13-207ENST00000527829 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
SLC39A13-207ENST00000527829 OSCARQ8IYS5 282 aa23.69■■□□□ 1.38
SLC39A13-207ENST00000527829 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
SLC39A13-207ENST00000527829 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
SLC39A13-207ENST00000527829 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
SLC39A13-207ENST00000527829 FBLN2P98095 1184 aa23.66■■□□□ 1.38
SLC39A13-207ENST00000527829 SYNJ2O15056 1496 aa23.65■■□□□ 1.38
SLC39A13-207ENST00000527829 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
SLC39A13-207ENST00000527829 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
SLC39A13-207ENST00000527829 FHAD1B1AJZ9 1412 aa23.57■■□□□ 1.36
SLC39A13-207ENST00000527829 CUL7Q14999 1698 aa23.55■■□□□ 1.36
SLC39A13-207ENST00000527829 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
SLC39A13-207ENST00000527829 IGF1RP08069 1367 aa23.46■■□□□ 1.35
SLC39A13-207ENST00000527829 CLASP1Q7Z460 1538 aa23.4■■□□□ 1.34
SLC39A13-207ENST00000527829 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
SLC39A13-207ENST00000527829 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
SLC39A13-207ENST00000527829 RUSC2Q8N2Y8 1516 aa23.37■■□□□ 1.33
SLC39A13-207ENST00000527829 CEP170Q5SW79 1584 aa23.36■■□□□ 1.33
SLC39A13-207ENST00000527829 NUP160Q12769 1436 aa23.36■■□□□ 1.33
SLC39A13-207ENST00000527829 EEA1Q15075 1411 aa23.34■■□□□ 1.33
SLC39A13-207ENST00000527829 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
SLC39A13-207ENST00000527829 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
SLC39A13-207ENST00000527829 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
SLC39A13-207ENST00000527829 ARHGEF11O15085 1522 aa23.29■■□□□ 1.32
SLC39A13-207ENST00000527829 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
SLC39A13-207ENST00000527829 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms