RNA–Protein interactions for RNA: ENST00000527816.5

PLEC-212, Transcript of plectin, humanhuman

TSL 3

Gene PLEC, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEC-212ENST00000527816 NISCHQ9Y2I1 1504 aa32.52■■■□□ 2.8
PLEC-212ENST00000527816 CCDC180Q9P1Z9 1646 aa28.93■■■□□ 2.22
PLEC-212ENST00000527816 ABCC9O60706 1549 aa28.2■■■□□ 2.1
PLEC-212ENST00000527816 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
PLEC-212ENST00000527816 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.94
PLEC-212ENST00000527816 NACADO15069 1562 aa27.17■■□□□ 1.94
PLEC-212ENST00000527816 ZCCHC6Q5VYS8 1495 aaKnown RBP27.1■■□□□ 1.93
PLEC-212ENST00000527816 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
PLEC-212ENST00000527816 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
PLEC-212ENST00000527816 UNC13AQ9UPW8 1703 aa26.57■■□□□ 1.84
PLEC-212ENST00000527816 SCRIBQ14160 1630 aa26.39■■□□□ 1.81
PLEC-212ENST00000527816 PABPN1Q86U42 306 aaKnown RBP eCLIP26.35■■□□□ 1.81
PLEC-212ENST00000527816 BICRAQ9NZM4 1560 aa26.3■■□□□ 1.8
PLEC-212ENST00000527816 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.77
PLEC-212ENST00000527816 DNAJC5BQ9UF47 199 aa25.74■■□□□ 1.71
PLEC-212ENST00000527816 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
PLEC-212ENST00000527816 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
PLEC-212ENST00000527816 CECR2Q9BXF3 1484 aa25.33■■□□□ 1.65
PLEC-212ENST00000527816 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
PLEC-212ENST00000527816 BAZ1AQ9NRL2 1556 aaPredicted RBP25.24■■□□□ 1.63
PLEC-212ENST00000527816 SMARCA2P51531 1590 aa25.08■■□□□ 1.61
PLEC-212ENST00000527816 ATAD2BQ9ULI0 1458 aa25.06■■□□□ 1.6
PLEC-212ENST00000527816 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
PLEC-212ENST00000527816 NCAPD3P42695 1498 aa25.03■■□□□ 1.6
PLEC-212ENST00000527816 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
PLEC-212ENST00000527816 HMGXB3Q12766 1538 aa24.94■■□□□ 1.58
PLEC-212ENST00000527816 BAZ1BQ9UIG0 1483 aaKnown RBP24.89■■□□□ 1.58
PLEC-212ENST00000527816 WIZO95785 1651 aa24.82■■□□□ 1.56
PLEC-212ENST00000527816 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
PLEC-212ENST00000527816 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
PLEC-212ENST00000527816 LAMC3Q9Y6N6 1575 aa24.41■■□□□ 1.5
PLEC-212ENST00000527816 NESP48681 1621 aa24.4■■□□□ 1.5
PLEC-212ENST00000527816 ERCC6Q03468 1493 aa24.35■■□□□ 1.49
PLEC-212ENST00000527816 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
PLEC-212ENST00000527816 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
PLEC-212ENST00000527816 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
PLEC-212ENST00000527816 PDS5BQ9NTI5 1447 aa24.25■■□□□ 1.47
PLEC-212ENST00000527816 CFTRP13569 1480 aa24.19■■□□□ 1.46
PLEC-212ENST00000527816 KIF21AQ7Z4S6 1674 aa24.17■■□□□ 1.46
PLEC-212ENST00000527816 PRDM2Q13029 1718 aa24.09■■□□□ 1.45
PLEC-212ENST00000527816 FANCD2Q9BXW9 1451 aa24.06■■□□□ 1.44
PLEC-212ENST00000527816 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
PLEC-212ENST00000527816 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
PLEC-212ENST00000527816 CUX2O14529 1486 aa24.03■■□□□ 1.44
PLEC-212ENST00000527816 MRC2Q9UBG0 1479 aa23.97■■□□□ 1.43
PLEC-212ENST00000527816 WDR62O43379 1518 aa23.88■■□□□ 1.41
PLEC-212ENST00000527816 URB2Q14146 1524 aaKnown RBP23.78■■□□□ 1.4
PLEC-212ENST00000527816 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
PLEC-212ENST00000527816 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
PLEC-212ENST00000527816 TOPBP1Q92547 1522 aa23.67■■□□□ 1.38
PLEC-212ENST00000527816 IFT140Q96RY7 1462 aa23.52■■□□□ 1.36
PLEC-212ENST00000527816 CUX1P39880 1505 aa23.5■■□□□ 1.35
PLEC-212ENST00000527816 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
PLEC-212ENST00000527816 FGD5Q6ZNL6 1462 aa23.43■■□□□ 1.34
PLEC-212ENST00000527816 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.341e-6■■■■■ 58.5
PLEC-212ENST00000527816 SOGA1O94964 1423 aa23.4■■□□□ 1.34
PLEC-212ENST00000527816 TARBP1Q13395 1621 aaKnown RBP23.4■■□□□ 1.34
PLEC-212ENST00000527816 ZNF608Q9ULD9 1512 aaPredicted RBP23.36■■□□□ 1.33
PLEC-212ENST00000527816 TOP2BQ02880 1626 aa23.36■■□□□ 1.33
PLEC-212ENST00000527816 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
PLEC-212ENST00000527816 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
PLEC-212ENST00000527816 SYNJ1O43426 1573 aa23.33■■□□□ 1.33
PLEC-212ENST00000527816 EIF4G3O43432 1585 aaKnown RBP23.31■■□□□ 1.32
PLEC-212ENST00000527816 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
PLEC-212ENST00000527816 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.313e-7■■□□□ 13.2
PLEC-212ENST00000527816 TDRD9Q8NDG6 1382 aaKnown RBP23.23■■□□□ 1.31
PLEC-212ENST00000527816 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
PLEC-212ENST00000527816 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
PLEC-212ENST00000527816 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
PLEC-212ENST00000527816 GRIN2BQ13224 1484 aa23.11■■□□□ 1.29
PLEC-212ENST00000527816 PBRM1Q86U86 1689 aa23.11■■□□□ 1.29
PLEC-212ENST00000527816 ABCA5Q8WWZ7 1642 aa23.11■■□□□ 1.29
PLEC-212ENST00000527816 OSCARQ8IYS5 282 aa23.07■■□□□ 1.28
PLEC-212ENST00000527816 SNAPC4Q5SXM2 1469 aa23.06■■□□□ 1.28
PLEC-212ENST00000527816 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
PLEC-212ENST00000527816 CHD1O14646 1710 aa23.03■■□□□ 1.28
PLEC-212ENST00000527816 FBLN2P98095 1184 aa23.03■■□□□ 1.28
PLEC-212ENST00000527816 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
PLEC-212ENST00000527816 SYNJ2O15056 1496 aa22.95■■□□□ 1.26
PLEC-212ENST00000527816 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
PLEC-212ENST00000527816 TRIM41Q8WV44 630 aa22.95■■□□□ 1.26
PLEC-212ENST00000527816 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
PLEC-212ENST00000527816 ADAMTS12P58397 1594 aa22.89■■□□□ 1.25
PLEC-212ENST00000527816 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
PLEC-212ENST00000527816 GRIN2AQ12879 1464 aa22.81■■□□□ 1.24
PLEC-212ENST00000527816 CUL7Q14999 1698 aa22.79■■□□□ 1.24
PLEC-212ENST00000527816 IGF1RP08069 1367 aa22.78■■□□□ 1.24
PLEC-212ENST00000527816 CLASP1Q7Z460 1538 aa22.73■■□□□ 1.23
PLEC-212ENST00000527816 RUSC2Q8N2Y8 1516 aa22.69■■□□□ 1.22
PLEC-212ENST00000527816 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
PLEC-212ENST00000527816 NUP160Q12769 1436 aa22.68■■□□□ 1.22
PLEC-212ENST00000527816 CARMIL1Q5VZK9 1371 aa22.68■■□□□ 1.22
PLEC-212ENST00000527816 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
PLEC-212ENST00000527816 RIMBP3CA6NJZ7 1639 aa22.67■■□□□ 1.22
PLEC-212ENST00000527816 RIMBP3BA6NNM3 1639 aa22.67■■□□□ 1.22
PLEC-212ENST00000527816 RIMBP3Q9UFD9 1639 aa22.67■■□□□ 1.22
PLEC-212ENST00000527816 ARHGEF11O15085 1522 aa22.67■■□□□ 1.22
PLEC-212ENST00000527816 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
PLEC-212ENST00000527816 EEA1Q15075 1411 aa22.56■■□□□ 1.2
PLEC-212ENST00000527816 SHROOM2Q13796 1616 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms