RNA–Protein interactions for RNA: ENST00000527765.1

SYVN1-209, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 516 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-209ENST00000527765 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
SYVN1-209ENST00000527765 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
SYVN1-209ENST00000527765 ABCC9O60706 1549 aa28.01■■■□□ 2.07
SYVN1-209ENST00000527765 RB1CC1Q8TDY2 1594 aa26.81■■□□□ 1.88
SYVN1-209ENST00000527765 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
SYVN1-209ENST00000527765 NACADO15069 1562 aa26.69■■□□□ 1.86
SYVN1-209ENST00000527765 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
SYVN1-209ENST00000527765 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
SYVN1-209ENST00000527765 PABPN1Q86U42 306 aaKnown RBP eCLIP26.18■■□□□ 1.78
SYVN1-209ENST00000527765 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.78
SYVN1-209ENST00000527765 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
SYVN1-209ENST00000527765 DNAJC5BQ9UF47 199 aa26■■□□□ 1.75
SYVN1-209ENST00000527765 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
SYVN1-209ENST00000527765 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
SYVN1-209ENST00000527765 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
SYVN1-209ENST00000527765 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
SYVN1-209ENST00000527765 CC2D2AQ9P2K1 1620 aa25.28■■□□□ 1.64
SYVN1-209ENST00000527765 CECR2Q9BXF3 1484 aa25.24■■□□□ 1.63
SYVN1-209ENST00000527765 NCAPD3P42695 1498 aa24.64■■□□□ 1.53
SYVN1-209ENST00000527765 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
SYVN1-209ENST00000527765 ATAD2BQ9ULI0 1458 aa24.58■■□□□ 1.52
SYVN1-209ENST00000527765 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
SYVN1-209ENST00000527765 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
SYVN1-209ENST00000527765 HMGXB3Q12766 1538 aa24.45■■□□□ 1.5
SYVN1-209ENST00000527765 BAZ1BQ9UIG0 1483 aaKnown RBP24.39■■□□□ 1.5
SYVN1-209ENST00000527765 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.49
SYVN1-209ENST00000527765 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.49
SYVN1-209ENST00000527765 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
SYVN1-209ENST00000527765 NESP48681 1621 aa24.1■■□□□ 1.45
SYVN1-209ENST00000527765 CUX2O14529 1486 aa24.07■■□□□ 1.44
SYVN1-209ENST00000527765 WIZO95785 1651 aa24.03■■□□□ 1.44
SYVN1-209ENST00000527765 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
SYVN1-209ENST00000527765 RSF1Q96T23 1441 aaPredicted RBP23.98■■□□□ 1.43
SYVN1-209ENST00000527765 PDS5BQ9NTI5 1447 aa23.97■■□□□ 1.43
SYVN1-209ENST00000527765 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
SYVN1-209ENST00000527765 TOP2AP11388 1531 aaKnown RBP23.8■■□□□ 1.4
SYVN1-209ENST00000527765 DNAJC5Q9H3Z4 198 aa23.78■■□□□ 1.4
SYVN1-209ENST00000527765 THOC2Q8NI27 1593 aaKnown RBP23.75■■□□□ 1.39
SYVN1-209ENST00000527765 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
SYVN1-209ENST00000527765 CFTRP13569 1480 aa23.68■■□□□ 1.38
SYVN1-209ENST00000527765 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
SYVN1-209ENST00000527765 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
SYVN1-209ENST00000527765 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
SYVN1-209ENST00000527765 WDR62O43379 1518 aa23.55■■□□□ 1.36
SYVN1-209ENST00000527765 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
SYVN1-209ENST00000527765 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
SYVN1-209ENST00000527765 PRDM2Q13029 1718 aa23.35■■□□□ 1.33
SYVN1-209ENST00000527765 ABCC8Q09428 1581 aa23.26■■□□□ 1.31
SYVN1-209ENST00000527765 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
SYVN1-209ENST00000527765 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
SYVN1-209ENST00000527765 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
SYVN1-209ENST00000527765 DNMBPQ6XZF7 1577 aa23.13■■□□□ 1.29
SYVN1-209ENST00000527765 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
SYVN1-209ENST00000527765 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
SYVN1-209ENST00000527765 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
SYVN1-209ENST00000527765 SOGA1O94964 1423 aa22.94■■□□□ 1.26
SYVN1-209ENST00000527765 TARBP1Q13395 1621 aaKnown RBP22.91■■□□□ 1.26
SYVN1-209ENST00000527765 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.262e-8■■■□□ 15.1
SYVN1-209ENST00000527765 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
SYVN1-209ENST00000527765 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
SYVN1-209ENST00000527765 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
SYVN1-209ENST00000527765 FGD5Q6ZNL6 1462 aa22.86■■□□□ 1.25
SYVN1-209ENST00000527765 CUX1P39880 1505 aa22.85■■□□□ 1.25
SYVN1-209ENST00000527765 TDRD9Q8NDG6 1382 aaKnown RBP22.84■■□□□ 1.25
SYVN1-209ENST00000527765 FBLN2P98095 1184 aa22.83■■□□□ 1.25
SYVN1-209ENST00000527765 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
SYVN1-209ENST00000527765 CHMP7Q8WUX9 453 aaPredicted RBP22.71■■□□□ 1.23
SYVN1-209ENST00000527765 GRIN2BQ13224 1484 aa22.7■■□□□ 1.22
SYVN1-209ENST00000527765 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
SYVN1-209ENST00000527765 SNAPC4Q5SXM2 1469 aa22.67■■□□□ 1.22
SYVN1-209ENST00000527765 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
SYVN1-209ENST00000527765 CHD1O14646 1710 aa22.65■■□□□ 1.22
SYVN1-209ENST00000527765 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
SYVN1-209ENST00000527765 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
SYVN1-209ENST00000527765 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
SYVN1-209ENST00000527765 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
SYVN1-209ENST00000527765 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
SYVN1-209ENST00000527765 ARHGEF11O15085 1522 aa22.6■■□□□ 1.21
SYVN1-209ENST00000527765 TOP2BQ02880 1626 aa22.58■■□□□ 1.21
SYVN1-209ENST00000527765 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
SYVN1-209ENST00000527765 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
SYVN1-209ENST00000527765 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
SYVN1-209ENST00000527765 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
SYVN1-209ENST00000527765 ABCA5Q8WWZ7 1642 aa22.5■■□□□ 1.19
SYVN1-209ENST00000527765 PBRM1Q86U86 1689 aa22.5■■□□□ 1.19
SYVN1-209ENST00000527765 CLASP1Q7Z460 1538 aa22.42■■□□□ 1.18
SYVN1-209ENST00000527765 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
SYVN1-209ENST00000527765 GRIN2AQ12879 1464 aa22.37■■□□□ 1.17
SYVN1-209ENST00000527765 ARAP1Q96P48 1450 aa22.37■■□□□ 1.17
SYVN1-209ENST00000527765 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
SYVN1-209ENST00000527765 ADAMTS12P58397 1594 aa22.33■■□□□ 1.17
SYVN1-209ENST00000527765 NUP160Q12769 1436 aa22.26■■□□□ 1.15
SYVN1-209ENST00000527765 KIF27Q86VH2 1401 aa22.25■■□□□ 1.15
SYVN1-209ENST00000527765 TRHP20396 242 aaPredicted RBP22.25■■□□□ 1.15
SYVN1-209ENST00000527765 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
SYVN1-209ENST00000527765 IGF1RP08069 1367 aa22.16■■□□□ 1.14
SYVN1-209ENST00000527765 JPH4Q96JJ6 628 aa22.13■■□□□ 1.13
SYVN1-209ENST00000527765 PRG4Q92954 1404 aaPredicted RBP22.09■■□□□ 1.13
SYVN1-209ENST00000527765 CUL7Q14999 1698 aa22.08■■□□□ 1.13
SYVN1-209ENST00000527765 SHROOM2Q13796 1616 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms