RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
CAPN1-210ENST00000527699 ABCC9O60706 1549 aa23.56■■□□□ 1.36
CAPN1-210ENST00000527699 DNAJC5BQ9UF47 199 aa23.03■■□□□ 1.28
CAPN1-210ENST00000527699 CCDC180Q9P1Z9 1646 aa22.32■■□□□ 1.16
CAPN1-210ENST00000527699 DNAJC5Q9H3Z4 198 aa21.97■■□□□ 1.11
CAPN1-210ENST00000527699 RB1CC1Q8TDY2 1594 aa21.86■■□□□ 1.09
CAPN1-210ENST00000527699 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
CAPN1-210ENST00000527699 NACADO15069 1562 aa21.38■■□□□ 1.01
CAPN1-210ENST00000527699 UNC13AQ9UPW8 1703 aa21.36■■□□□ 1.01
CAPN1-210ENST00000527699 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
CAPN1-210ENST00000527699 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
CAPN1-210ENST00000527699 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
CAPN1-210ENST00000527699 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
CAPN1-210ENST00000527699 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
CAPN1-210ENST00000527699 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
CAPN1-210ENST00000527699 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
CAPN1-210ENST00000527699 CUX2O14529 1486 aa20.68■□□□□ 0.9
CAPN1-210ENST00000527699 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
CAPN1-210ENST00000527699 ZCCHC6Q5VYS8 1495 aaKnown RBP20.49■□□□□ 0.87
CAPN1-210ENST00000527699 ERCC6Q03468 1493 aa20.46■□□□□ 0.87
CAPN1-210ENST00000527699 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
CAPN1-210ENST00000527699 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
CAPN1-210ENST00000527699 NESP48681 1621 aa19.88■□□□□ 0.77
CAPN1-210ENST00000527699 THOC2Q8NI27 1593 aaKnown RBP19.85■□□□□ 0.77
CAPN1-210ENST00000527699 AEBP2Q6ZN18 517 aaPredicted RBP19.83■□□□□ 0.77
CAPN1-210ENST00000527699 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
CAPN1-210ENST00000527699 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
CAPN1-210ENST00000527699 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
CAPN1-210ENST00000527699 OSCARQ8IYS5 282 aa19.61■□□□□ 0.73
CAPN1-210ENST00000527699 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
CAPN1-210ENST00000527699 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
CAPN1-210ENST00000527699 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-210ENST00000527699 LAMC3Q9Y6N6 1575 aa19.5■□□□□ 0.71
CAPN1-210ENST00000527699 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
CAPN1-210ENST00000527699 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
CAPN1-210ENST00000527699 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
CAPN1-210ENST00000527699 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
CAPN1-210ENST00000527699 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
CAPN1-210ENST00000527699 MRC2Q9UBG0 1479 aa19.36■□□□□ 0.69
CAPN1-210ENST00000527699 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
CAPN1-210ENST00000527699 SMARCA4P51532 1647 aa19.35■□□□□ 0.69
CAPN1-210ENST00000527699 WDR62O43379 1518 aa19.3■□□□□ 0.68
CAPN1-210ENST00000527699 CYB5RLQ6IPT4 315 aa19.29■□□□□ 0.68
CAPN1-210ENST00000527699 ARHGEF11O15085 1522 aa19.28■□□□□ 0.68
CAPN1-210ENST00000527699 MROH2BQ7Z745 1585 aa19.17■□□□□ 0.66
CAPN1-210ENST00000527699 CADPSQ9ULU8 1353 aa19.12■□□□□ 0.65
CAPN1-210ENST00000527699 ILDR1Q86SU0 546 aaPredicted RBP19.08■□□□□ 0.64
CAPN1-210ENST00000527699 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
CAPN1-210ENST00000527699 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
CAPN1-210ENST00000527699 ARAP1Q96P48 1450 aa19■□□□□ 0.63
CAPN1-210ENST00000527699 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
CAPN1-210ENST00000527699 WIZO95785 1651 aa18.95■□□□□ 0.62
CAPN1-210ENST00000527699 URB2Q14146 1524 aaKnown RBP18.83■□□□□ 0.6
CAPN1-210ENST00000527699 ZNF608Q9ULD9 1512 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-210ENST00000527699 CHD1O14646 1710 aa18.77■□□□□ 0.6
CAPN1-210ENST00000527699 FBLN2P98095 1184 aa18.77■□□□□ 0.6
CAPN1-210ENST00000527699 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-210ENST00000527699 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
CAPN1-210ENST00000527699 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
CAPN1-210ENST00000527699 CFTRP13569 1480 aa18.63■□□□□ 0.57
CAPN1-210ENST00000527699 TOP2AP11388 1531 aaKnown RBP18.61■□□□□ 0.57
CAPN1-210ENST00000527699 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.564e-7■■■■□ 19.3
CAPN1-210ENST00000527699 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
CAPN1-210ENST00000527699 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
CAPN1-210ENST00000527699 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
CAPN1-210ENST00000527699 PRDM2Q13029 1718 aa18.41■□□□□ 0.54
CAPN1-210ENST00000527699 KDM4FA0A1W2PPD8 638 aa18.41■□□□□ 0.54
CAPN1-210ENST00000527699 GAPVD1Q14C86 1478 aa18.4■□□□□ 0.54
CAPN1-210ENST00000527699 SYNJ1O43426 1573 aa18.39■□□□□ 0.53
CAPN1-210ENST00000527699 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-210ENST00000527699 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
CAPN1-210ENST00000527699 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
CAPN1-210ENST00000527699 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
CAPN1-210ENST00000527699 KIF13AQ9H1H9 1805 aa18.28■□□□□ 0.52
CAPN1-210ENST00000527699 DNMBPQ6XZF7 1577 aa18.27■□□□□ 0.52
CAPN1-210ENST00000527699 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
CAPN1-210ENST00000527699 ERCC6L2Q5T890 1561 aa18.21■□□□□ 0.51
CAPN1-210ENST00000527699 FBXO41Q8TF61 875 aa18.18■□□□□ 0.5
CAPN1-210ENST00000527699 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
CAPN1-210ENST00000527699 POLA1P09884 1462 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-210ENST00000527699 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
CAPN1-210ENST00000527699 MAGI1Q96QZ7 1491 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-210ENST00000527699 KDM6BO15054 1643 aa18.14■□□□□ 0.49
CAPN1-210ENST00000527699 FAM69CQ0P6D2 419 aa18.14■□□□□ 0.49
CAPN1-210ENST00000527699 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
CAPN1-210ENST00000527699 LMTK3Q96Q04 1460 aa18.12■□□□□ 0.49
CAPN1-210ENST00000527699 SOGA1O94964 1423 aa18.11■□□□□ 0.49
CAPN1-210ENST00000527699 GRIN2BQ13224 1484 aa18.06■□□□□ 0.48
CAPN1-210ENST00000527699 ADGRL1O94910 1474 aa18.03■□□□□ 0.48
CAPN1-210ENST00000527699 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
CAPN1-210ENST00000527699 SUPT5HO00267 1087 aaKnown RBP18.03■□□□□ 0.48
CAPN1-210ENST00000527699 WDR97A6NE52 1622 aa18.02■□□□□ 0.48
CAPN1-210ENST00000527699 TSPOAP1O95153 1857 aa18.01■□□□□ 0.47
CAPN1-210ENST00000527699 ABCC10Q5T3U5 1492 aa18■□□□□ 0.47
CAPN1-210ENST00000527699 CUX1P39880 1505 aa17.99■□□□□ 0.47
CAPN1-210ENST00000527699 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
CAPN1-210ENST00000527699 NPM1P06748 294 aaKnown RBP eCLIP17.96■□□□□ 0.47
CAPN1-210ENST00000527699 PBRM1Q86U86 1689 aa17.95■□□□□ 0.46
CAPN1-210ENST00000527699 SOCS7O14512 581 aa17.94■□□□□ 0.46
CAPN1-210ENST00000527699 DIP2BQ9P265 1576 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms