RNA–Protein interactions for RNA: ENST00000527496.1

ABCA7-210, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 4

Gene ABCA7, Length 591 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-210ENST00000527496 NISCHQ9Y2I1 1504 aa40.94■■■■■ 4.14
ABCA7-210ENST00000527496 CCDC180Q9P1Z9 1646 aa36.38■■■■□ 3.41
ABCA7-210ENST00000527496 ABCC9O60706 1549 aa35.31■■■■□ 3.24
ABCA7-210ENST00000527496 ZCCHC6Q5VYS8 1495 aaKnown RBP34.18■■■■□ 3.06
ABCA7-210ENST00000527496 NACADO15069 1562 aa34.15■■■■□ 3.06
ABCA7-210ENST00000527496 RB1CC1Q8TDY2 1594 aa34.12■■■■□ 3.05
ABCA7-210ENST00000527496 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
ABCA7-210ENST00000527496 DCAF1Q9Y4B6 1507 aa33.98■■■■□ 3.03
ABCA7-210ENST00000527496 DCAF8L2P0C7V8 631 aa33.88■■■■□ 3.01
ABCA7-210ENST00000527496 UNC13AQ9UPW8 1703 aa33.3■■■□□ 2.92
ABCA7-210ENST00000527496 BICRAQ9NZM4 1560 aa33.1■■■□□ 2.89
ABCA7-210ENST00000527496 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
ABCA7-210ENST00000527496 PABPN1Q86U42 306 aaKnown RBP eCLIP32.96■■■□□ 2.87
ABCA7-210ENST00000527496 SHROOM4Q9ULL8 1493 aa32.88■■■□□ 2.85
ABCA7-210ENST00000527496 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
ABCA7-210ENST00000527496 EIF4G1Q04637 1599 aaKnown RBP32.19■■■□□ 2.74
ABCA7-210ENST00000527496 CC2D2AQ9P2K1 1620 aa32■■■□□ 2.71
ABCA7-210ENST00000527496 CECR2Q9BXF3 1484 aa31.83■■■□□ 2.69
ABCA7-210ENST00000527496 SMARCA4P51532 1647 aa31.74■■■□□ 2.67
ABCA7-210ENST00000527496 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
ABCA7-210ENST00000527496 MROH2BQ7Z745 1585 aa31.52■■■□□ 2.64
ABCA7-210ENST00000527496 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
ABCA7-210ENST00000527496 NCAPD3P42695 1498 aa31.51■■■□□ 2.63
ABCA7-210ENST00000527496 SMARCA2P51531 1590 aa31.51■■■□□ 2.63
ABCA7-210ENST00000527496 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
ABCA7-210ENST00000527496 HMGXB3Q12766 1538 aa31.39■■■□□ 2.62
ABCA7-210ENST00000527496 BAZ1BQ9UIG0 1483 aaKnown RBP31.24■■■□□ 2.59
ABCA7-210ENST00000527496 RSF1Q96T23 1441 aaPredicted RBP31.23■■■□□ 2.59
ABCA7-210ENST00000527496 WIZO95785 1651 aa31.16■■■□□ 2.58
ABCA7-210ENST00000527496 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
ABCA7-210ENST00000527496 LAMC3Q9Y6N6 1575 aa30.65■■■□□ 2.5
ABCA7-210ENST00000527496 NESP48681 1621 aa30.62■■■□□ 2.49
ABCA7-210ENST00000527496 CADPSQ9ULU8 1353 aa30.55■■■□□ 2.48
ABCA7-210ENST00000527496 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
ABCA7-210ENST00000527496 CFTRP13569 1480 aa30.44■■■□□ 2.46
ABCA7-210ENST00000527496 ERCC6Q03468 1493 aa30.42■■■□□ 2.46
ABCA7-210ENST00000527496 PDS5BQ9NTI5 1447 aa30.4■■■□□ 2.46
ABCA7-210ENST00000527496 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
ABCA7-210ENST00000527496 KIF21AQ7Z4S6 1674 aa30.27■■■□□ 2.44
ABCA7-210ENST00000527496 THOC2Q8NI27 1593 aaKnown RBP30.21■■■□□ 2.43
ABCA7-210ENST00000527496 PRDM2Q13029 1718 aa30.2■■■□□ 2.43
ABCA7-210ENST00000527496 FANCD2Q9BXW9 1451 aa30.19■■■□□ 2.42
ABCA7-210ENST00000527496 CUX2O14529 1486 aa30.16■■■□□ 2.42
ABCA7-210ENST00000527496 CEP164Q9UPV0 1460 aa30.15■■■□□ 2.42
ABCA7-210ENST00000527496 MRC2Q9UBG0 1479 aa30.09■■■□□ 2.41
ABCA7-210ENST00000527496 WDR62O43379 1518 aa30.02■■■□□ 2.4
ABCA7-210ENST00000527496 URB2Q14146 1524 aaKnown RBP29.9■■■□□ 2.38
ABCA7-210ENST00000527496 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
ABCA7-210ENST00000527496 DNMBPQ6XZF7 1577 aa29.74■■■□□ 2.35
ABCA7-210ENST00000527496 TOPBP1Q92547 1522 aa29.74■■■□□ 2.35
ABCA7-210ENST00000527496 CUX1P39880 1505 aa29.58■■■□□ 2.33
ABCA7-210ENST00000527496 IFT140Q96RY7 1462 aa29.53■■■□□ 2.32
ABCA7-210ENST00000527496 POLA1P09884 1462 aaPredicted RBP29.5■■■□□ 2.31
ABCA7-210ENST00000527496 FGD5Q6ZNL6 1462 aa29.44■■■□□ 2.3
ABCA7-210ENST00000527496 TARBP1Q13395 1621 aaKnown RBP29.43■■■□□ 2.3
ABCA7-210ENST00000527496 WRNQ14191 1432 aaPredicted RBP eCLIP29.42■■■□□ 2.3
ABCA7-210ENST00000527496 BIVM-ERCC5R4GMW8 1640 aa29.39■■■□□ 2.3
ABCA7-210ENST00000527496 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
ABCA7-210ENST00000527496 SYNJ1O43426 1573 aa29.35■■■□□ 2.29
ABCA7-210ENST00000527496 SOGA1O94964 1423 aa29.34■■■□□ 2.29
ABCA7-210ENST00000527496 ZNF608Q9ULD9 1512 aaPredicted RBP29.34■■■□□ 2.29
ABCA7-210ENST00000527496 RAD54L2Q9Y4B4 1467 aa29.32■■■□□ 2.28
ABCA7-210ENST00000527496 WDR97A6NE52 1622 aa29.28■■■□□ 2.28
ABCA7-210ENST00000527496 EIF4G3O43432 1585 aaKnown RBP29.27■■■□□ 2.28
ABCA7-210ENST00000527496 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.27
ABCA7-210ENST00000527496 AQRO60306 1485 aaKnown RBP eCLIP29.17■■■□□ 2.26
ABCA7-210ENST00000527496 TDRD9Q8NDG6 1382 aaKnown RBP29.13■■■□□ 2.25
ABCA7-210ENST00000527496 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
ABCA7-210ENST00000527496 GRIN2BQ13224 1484 aa29.03■■■□□ 2.24
ABCA7-210ENST00000527496 GAPVD1Q14C86 1478 aa29.03■■■□□ 2.24
ABCA7-210ENST00000527496 MAGI1Q96QZ7 1491 aaPredicted RBP28.96■■■□□ 2.23
ABCA7-210ENST00000527496 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
ABCA7-210ENST00000527496 DNAJC5Q9H3Z4 198 aa28.95■■■□□ 2.22
ABCA7-210ENST00000527496 SNAPC4Q5SXM2 1469 aa28.95■■■□□ 2.22
ABCA7-210ENST00000527496 ERICH3Q5RHP9 1530 aa28.87■■■□□ 2.21
ABCA7-210ENST00000527496 SYNJ2O15056 1496 aa28.83■■■□□ 2.21
ABCA7-210ENST00000527496 CHD1O14646 1710 aa28.82■■■□□ 2.2
ABCA7-210ENST00000527496 OSCARQ8IYS5 282 aa28.81■■■□□ 2.2
ABCA7-210ENST00000527496 KIF27Q86VH2 1401 aa28.8■■■□□ 2.2
ABCA7-210ENST00000527496 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
ABCA7-210ENST00000527496 FHAD1B1AJZ9 1412 aa28.72■■■□□ 2.19
ABCA7-210ENST00000527496 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
ABCA7-210ENST00000527496 CHMP7Q8WUX9 453 aaPredicted RBP28.69■■■□□ 2.18
ABCA7-210ENST00000527496 FBLN2P98095 1184 aa28.68■■■□□ 2.18
ABCA7-210ENST00000527496 GRIN2AQ12879 1464 aa28.66■■■□□ 2.18
ABCA7-210ENST00000527496 IGF1RP08069 1367 aa28.65■■■□□ 2.18
ABCA7-210ENST00000527496 CUL7Q14999 1698 aa28.62■■■□□ 2.17
ABCA7-210ENST00000527496 CLASP1Q7Z460 1538 aa28.6■■■□□ 2.17
ABCA7-210ENST00000527496 NUP160Q12769 1436 aa28.56■■■□□ 2.16
ABCA7-210ENST00000527496 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
ABCA7-210ENST00000527496 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
ABCA7-210ENST00000527496 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
ABCA7-210ENST00000527496 CARMIL1Q5VZK9 1371 aa28.47■■■□□ 2.15
ABCA7-210ENST00000527496 ARHGEF11O15085 1522 aa28.42■■■□□ 2.14
ABCA7-210ENST00000527496 EEA1Q15075 1411 aa28.4■■■□□ 2.14
ABCA7-210ENST00000527496 RIMBP3CA6NJZ7 1639 aa28.39■■■□□ 2.13
ABCA7-210ENST00000527496 RIMBP3BA6NNM3 1639 aa28.39■■■□□ 2.13
ABCA7-210ENST00000527496 RIMBP3Q9UFD9 1639 aa28.39■■■□□ 2.13
ABCA7-210ENST00000527496 RAPGEF2Q9Y4G8 1499 aa28.35■■■□□ 2.13
ABCA7-210ENST00000527496 SHROOM2Q13796 1616 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms