RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
UBQLN1-204ENST00000527373 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
UBQLN1-204ENST00000527373 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
UBQLN1-204ENST00000527373 CCDC180Q9P1Z9 1646 aa21.85■■□□□ 1.09
UBQLN1-204ENST00000527373 ABCC9O60706 1549 aa21.29■■□□□ 1
UBQLN1-204ENST00000527373 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
UBQLN1-204ENST00000527373 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
UBQLN1-204ENST00000527373 NACADO15069 1562 aa20.53■□□□□ 0.88
UBQLN1-204ENST00000527373 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
UBQLN1-204ENST00000527373 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
UBQLN1-204ENST00000527373 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
UBQLN1-204ENST00000527373 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
UBQLN1-204ENST00000527373 SCRIBQ14160 1630 aa20.06■□□□□ 0.8
UBQLN1-204ENST00000527373 UNC13AQ9UPW8 1703 aa20.02■□□□□ 0.79
UBQLN1-204ENST00000527373 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
UBQLN1-204ENST00000527373 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
UBQLN1-204ENST00000527373 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
UBQLN1-204ENST00000527373 BICRAQ9NZM4 1560 aa19.84■□□□□ 0.77
UBQLN1-204ENST00000527373 EIF4G1Q04637 1599 aaKnown RBP19.33■□□□□ 0.69
UBQLN1-204ENST00000527373 DNAJC5BQ9UF47 199 aa19.32■□□□□ 0.68
UBQLN1-204ENST00000527373 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
UBQLN1-204ENST00000527373 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
UBQLN1-204ENST00000527373 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
UBQLN1-204ENST00000527373 SMARCA4P51532 1647 aa19.16■□□□□ 0.66
UBQLN1-204ENST00000527373 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
UBQLN1-204ENST00000527373 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
UBQLN1-204ENST00000527373 SMARCA2P51531 1590 aa19■□□□□ 0.63
UBQLN1-204ENST00000527373 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
UBQLN1-204ENST00000527373 NCAPD3P42695 1498 aa18.94■□□□□ 0.62
UBQLN1-204ENST00000527373 WIZO95785 1651 aa18.92■□□□□ 0.62
UBQLN1-204ENST00000527373 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
UBQLN1-204ENST00000527373 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.62
UBQLN1-204ENST00000527373 SUPT5HO00267 1087 aaKnown RBP18.86■□□□□ 0.61
UBQLN1-204ENST00000527373 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
UBQLN1-204ENST00000527373 FOXD1Q16676 465 aa18.83■□□□□ 0.6
UBQLN1-204ENST00000527373 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
UBQLN1-204ENST00000527373 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
UBQLN1-204ENST00000527373 NESP48681 1621 aa18.47■□□□□ 0.55
UBQLN1-204ENST00000527373 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
UBQLN1-204ENST00000527373 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
UBQLN1-204ENST00000527373 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
UBQLN1-204ENST00000527373 CFTRP13569 1480 aa18.35■□□□□ 0.53
UBQLN1-204ENST00000527373 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.53
UBQLN1-204ENST00000527373 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
UBQLN1-204ENST00000527373 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
UBQLN1-204ENST00000527373 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
UBQLN1-204ENST00000527373 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
UBQLN1-204ENST00000527373 MRC2Q9UBG0 1479 aa18.1■□□□□ 0.49
UBQLN1-204ENST00000527373 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
UBQLN1-204ENST00000527373 URB2Q14146 1524 aaKnown RBP18.02■□□□□ 0.47
UBQLN1-204ENST00000527373 WDR62O43379 1518 aa17.99■□□□□ 0.47
UBQLN1-204ENST00000527373 CUX2O14529 1486 aa17.98■□□□□ 0.47
UBQLN1-204ENST00000527373 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
UBQLN1-204ENST00000527373 TOPBP1Q92547 1522 aa17.96■□□□□ 0.47
UBQLN1-204ENST00000527373 DNMBPQ6XZF7 1577 aa17.95■□□□□ 0.46
UBQLN1-204ENST00000527373 WRNQ14191 1432 aaPredicted RBP eCLIP17.91■□□□□ 0.46
UBQLN1-204ENST00000527373 CUX1P39880 1505 aa17.91■□□□□ 0.46
UBQLN1-204ENST00000527373 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.45
UBQLN1-204ENST00000527373 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
UBQLN1-204ENST00000527373 SYNJ1O43426 1573 aa17.82■□□□□ 0.44
UBQLN1-204ENST00000527373 SOGA1O94964 1423 aa17.81■□□□□ 0.44
UBQLN1-204ENST00000527373 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
UBQLN1-204ENST00000527373 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
UBQLN1-204ENST00000527373 RAD54L2Q9Y4B4 1467 aa17.79■□□□□ 0.44
UBQLN1-204ENST00000527373 BIVM-ERCC5R4GMW8 1640 aa17.77■□□□□ 0.44
UBQLN1-204ENST00000527373 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
UBQLN1-204ENST00000527373 TARBP1Q13395 1621 aaKnown RBP17.7■□□□□ 0.42
UBQLN1-204ENST00000527373 ZNF608Q9ULD9 1512 aaPredicted RBP17.7■□□□□ 0.42
UBQLN1-204ENST00000527373 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
UBQLN1-204ENST00000527373 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.42
UBQLN1-204ENST00000527373 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
UBQLN1-204ENST00000527373 ABCA10Q8WWZ4 1543 aa17.63■□□□□ 0.41
UBQLN1-204ENST00000527373 MSH5O43196 834 aa17.63■□□□□ 0.41
UBQLN1-204ENST00000527373 EIF4G3O43432 1585 aaKnown RBP17.61■□□□□ 0.41
UBQLN1-204ENST00000527373 WDR97A6NE52 1622 aa17.59■□□□□ 0.41
UBQLN1-204ENST00000527373 GAPVD1Q14C86 1478 aa17.58■□□□□ 0.41
UBQLN1-204ENST00000527373 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
UBQLN1-204ENST00000527373 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
UBQLN1-204ENST00000527373 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
UBQLN1-204ENST00000527373 FBLN2P98095 1184 aa17.53■□□□□ 0.4
UBQLN1-204ENST00000527373 ABCA5Q8WWZ7 1642 aa17.51■□□□□ 0.39
UBQLN1-204ENST00000527373 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
UBQLN1-204ENST00000527373 SNAPC4Q5SXM2 1469 aa17.49■□□□□ 0.39
UBQLN1-204ENST00000527373 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
UBQLN1-204ENST00000527373 PIAS4Q8N2W9 510 aaPredicted RBP17.47■□□□□ 0.39
UBQLN1-204ENST00000527373 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
UBQLN1-204ENST00000527373 FAM9AQ8IZU1 332 aaPredicted RBP17.46■□□□□ 0.39
UBQLN1-204ENST00000527373 RUSC2Q8N2Y8 1516 aa17.45■□□□□ 0.38
UBQLN1-204ENST00000527373 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
UBQLN1-204ENST00000527373 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
UBQLN1-204ENST00000527373 IGF1RP08069 1367 aa17.42■□□□□ 0.38
UBQLN1-204ENST00000527373 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
UBQLN1-204ENST00000527373 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
UBQLN1-204ENST00000527373 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
UBQLN1-204ENST00000527373 ADRA2BP18089 450 aa17.37■□□□□ 0.37
UBQLN1-204ENST00000527373 CHD1O14646 1710 aa17.36■□□□□ 0.37
UBQLN1-204ENST00000527373 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
UBQLN1-204ENST00000527373 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
UBQLN1-204ENST00000527373 ADAMTS12P58397 1594 aa17.35■□□□□ 0.37
UBQLN1-204ENST00000527373 EEA1Q15075 1411 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms