RNA–Protein interactions for RNA: ENST00000527226.2

TPT1-208, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 2

Gene TPT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-208ENST00000527226 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.96
TPT1-208ENST00000527226 CCDC180Q9P1Z9 1646 aa29.49■■■□□ 2.31
TPT1-208ENST00000527226 ABCC9O60706 1549 aa28.4■■■□□ 2.14
TPT1-208ENST00000527226 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
TPT1-208ENST00000527226 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
TPT1-208ENST00000527226 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
TPT1-208ENST00000527226 NACADO15069 1562 aa27.62■■■□□ 2.01
TPT1-208ENST00000527226 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
TPT1-208ENST00000527226 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
TPT1-208ENST00000527226 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
TPT1-208ENST00000527226 SCRIBQ14160 1630 aa27.07■■□□□ 1.92
TPT1-208ENST00000527226 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
TPT1-208ENST00000527226 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
TPT1-208ENST00000527226 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
TPT1-208ENST00000527226 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.86
TPT1-208ENST00000527226 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
TPT1-208ENST00000527226 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
TPT1-208ENST00000527226 BAZ1AQ9NRL2 1556 aaPredicted RBP25.97■■□□□ 1.75
TPT1-208ENST00000527226 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
TPT1-208ENST00000527226 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
TPT1-208ENST00000527226 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
TPT1-208ENST00000527226 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
TPT1-208ENST00000527226 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
TPT1-208ENST00000527226 CC2D2AQ9P2K1 1620 aa25.64■■□□□ 1.7
TPT1-208ENST00000527226 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
TPT1-208ENST00000527226 WIZO95785 1651 aa25.63■■□□□ 1.69
TPT1-208ENST00000527226 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
TPT1-208ENST00000527226 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
TPT1-208ENST00000527226 PEG3Q9GZU2 1588 aa25.58■■□□□ 1.69
TPT1-208ENST00000527226 NCAPD3P42695 1498 aa25.49■■□□□ 1.67
TPT1-208ENST00000527226 BAZ1BQ9UIG0 1483 aaKnown RBP25.48■■□□□ 1.67
TPT1-208ENST00000527226 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
TPT1-208ENST00000527226 HMGXB3Q12766 1538 aa25.41■■□□□ 1.66
TPT1-208ENST00000527226 CCDC88BA6NC98 1476 aa25.14■■□□□ 1.61
TPT1-208ENST00000527226 CADPSQ9ULU8 1353 aa24.82■■□□□ 1.56
TPT1-208ENST00000527226 CFTRP13569 1480 aa24.78■■□□□ 1.56
TPT1-208ENST00000527226 NESP48681 1621 aa24.74■■□□□ 1.55
TPT1-208ENST00000527226 LAMC3Q9Y6N6 1575 aa24.7■■□□□ 1.54
TPT1-208ENST00000527226 DNAJC5Q9H3Z4 198 aa24.63■■□□□ 1.53
TPT1-208ENST00000527226 PDS5BQ9NTI5 1447 aa24.58■■□□□ 1.53
TPT1-208ENST00000527226 FANCD2Q9BXW9 1451 aa24.55■■□□□ 1.52
TPT1-208ENST00000527226 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
TPT1-208ENST00000527226 CEP164Q9UPV0 1460 aa24.45■■□□□ 1.51
TPT1-208ENST00000527226 ERCC6Q03468 1493 aa24.45■■□□□ 1.5
TPT1-208ENST00000527226 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
TPT1-208ENST00000527226 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.49
TPT1-208ENST00000527226 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
TPT1-208ENST00000527226 TRIM41Q8WV44 630 aa24.31■■□□□ 1.48
TPT1-208ENST00000527226 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
TPT1-208ENST00000527226 CUX1P39880 1505 aa24.25■■□□□ 1.47
TPT1-208ENST00000527226 CUX2O14529 1486 aa24.25■■□□□ 1.47
TPT1-208ENST00000527226 URB2Q14146 1524 aaKnown RBP24.25■■□□□ 1.47
TPT1-208ENST00000527226 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
TPT1-208ENST00000527226 DNMBPQ6XZF7 1577 aa24.22■■□□□ 1.47
TPT1-208ENST00000527226 TOPBP1Q92547 1522 aa24.21■■□□□ 1.47
TPT1-208ENST00000527226 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
TPT1-208ENST00000527226 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
TPT1-208ENST00000527226 THOC2Q8NI27 1593 aaKnown RBP24.15■■□□□ 1.46
TPT1-208ENST00000527226 WDR62O43379 1518 aa24.13■■□□□ 1.45
TPT1-208ENST00000527226 FGD5Q6ZNL6 1462 aa24.1■■□□□ 1.45
TPT1-208ENST00000527226 POLA1P09884 1462 aaPredicted RBP24.05■■□□□ 1.44
TPT1-208ENST00000527226 SOGA1O94964 1423 aa24■■□□□ 1.43
TPT1-208ENST00000527226 RAD54L2Q9Y4B4 1467 aa23.97■■□□□ 1.43
TPT1-208ENST00000527226 IFT140Q96RY7 1462 aa23.91■■□□□ 1.42
TPT1-208ENST00000527226 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
TPT1-208ENST00000527226 TARBP1Q13395 1621 aaKnown RBP23.85■■□□□ 1.41
TPT1-208ENST00000527226 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
TPT1-208ENST00000527226 KIF27Q86VH2 1401 aa23.82■■□□□ 1.4
TPT1-208ENST00000527226 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
TPT1-208ENST00000527226 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
TPT1-208ENST00000527226 EEA1Q15075 1411 aa23.76■■□□□ 1.39
TPT1-208ENST00000527226 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
TPT1-208ENST00000527226 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
TPT1-208ENST00000527226 AQRO60306 1485 aaKnown RBP eCLIP23.73■■□□□ 1.393e-9■■■■■ 29.7
TPT1-208ENST00000527226 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
TPT1-208ENST00000527226 CSRNP3Q8WYN3 585 aa23.69■■□□□ 1.38
TPT1-208ENST00000527226 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
TPT1-208ENST00000527226 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
TPT1-208ENST00000527226 IGF1RP08069 1367 aa23.64■■□□□ 1.37
TPT1-208ENST00000527226 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
TPT1-208ENST00000527226 ERICH3Q5RHP9 1530 aa23.58■■□□□ 1.36
TPT1-208ENST00000527226 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
TPT1-208ENST00000527226 EHMT2Q96KQ7 1210 aa23.54■■□□□ 1.36
TPT1-208ENST00000527226 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
TPT1-208ENST00000527226 SNAPC4Q5SXM2 1469 aa23.5■■□□□ 1.35
TPT1-208ENST00000527226 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
TPT1-208ENST00000527226 CUL7Q14999 1698 aa23.48■■□□□ 1.35
TPT1-208ENST00000527226 MAGI1Q96QZ7 1491 aaPredicted RBP23.47■■□□□ 1.35
TPT1-208ENST00000527226 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
TPT1-208ENST00000527226 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
TPT1-208ENST00000527226 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
TPT1-208ENST00000527226 LOC105371045A0A1W2PR82 267 aa23.43■■□□□ 1.34
TPT1-208ENST00000527226 KIF21BO75037 1637 aa23.43■■□□□ 1.34
TPT1-208ENST00000527226 FBLN2P98095 1184 aa23.41■■□□□ 1.34
TPT1-208ENST00000527226 GOLGA3Q08378 1498 aa23.41■■□□□ 1.34
TPT1-208ENST00000527226 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
TPT1-208ENST00000527226 SYNJ2O15056 1496 aa23.38■■□□□ 1.33
TPT1-208ENST00000527226 UBTFP17480 764 aaKnown RBP23.38■■□□□ 1.33
TPT1-208ENST00000527226 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
TPT1-208ENST00000527226 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms