RNA–Protein interactions for RNA: ENST00000527114.5

FGFR1-230, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5

Gene FGFR1, Length 1,499 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-230ENST00000527114 NISCHQ9Y2I1 1504 aa32.55■■■□□ 2.8
FGFR1-230ENST00000527114 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
FGFR1-230ENST00000527114 ZCCHC6Q5VYS8 1495 aaKnown RBP27.31■■□□□ 1.96
FGFR1-230ENST00000527114 ABCC9O60706 1549 aa27.13■■□□□ 1.93
FGFR1-230ENST00000527114 DCAF1Q9Y4B6 1507 aa27.07■■□□□ 1.92
FGFR1-230ENST00000527114 MYO15BQ96JP2 1530 aa26.91■■□□□ 1.9
FGFR1-230ENST00000527114 NACADO15069 1562 aa26.77■■□□□ 1.88
FGFR1-230ENST00000527114 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
FGFR1-230ENST00000527114 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
FGFR1-230ENST00000527114 UNC13AQ9UPW8 1703 aa26.21■■□□□ 1.79
FGFR1-230ENST00000527114 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
FGFR1-230ENST00000527114 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
FGFR1-230ENST00000527114 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
FGFR1-230ENST00000527114 PABPN1Q86U42 306 aaKnown RBP eCLIP25.34■■□□□ 1.654e-6■□□□□ 9.3
FGFR1-230ENST00000527114 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
FGFR1-230ENST00000527114 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
FGFR1-230ENST00000527114 SMARCA4P51532 1647 aa25.17■■□□□ 1.62
FGFR1-230ENST00000527114 MROH2BQ7Z745 1585 aa25.07■■□□□ 1.6
FGFR1-230ENST00000527114 RSF1Q96T23 1441 aaPredicted RBP25.01■■□□□ 1.59
FGFR1-230ENST00000527114 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
FGFR1-230ENST00000527114 PEG3Q9GZU2 1588 aa24.95■■□□□ 1.59
FGFR1-230ENST00000527114 WIZO95785 1651 aa24.91■■□□□ 1.58
FGFR1-230ENST00000527114 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
FGFR1-230ENST00000527114 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
FGFR1-230ENST00000527114 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
FGFR1-230ENST00000527114 CC2D2AQ9P2K1 1620 aa24.71■■□□□ 1.55
FGFR1-230ENST00000527114 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
FGFR1-230ENST00000527114 HMGXB3Q12766 1538 aa24.67■■□□□ 1.54
FGFR1-230ENST00000527114 NCAPD3P42695 1498 aa24.61■■□□□ 1.53
FGFR1-230ENST00000527114 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
FGFR1-230ENST00000527114 CCDC88BA6NC98 1476 aa24.29■■□□□ 1.48
FGFR1-230ENST00000527114 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
FGFR1-230ENST00000527114 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
FGFR1-230ENST00000527114 CFTRP13569 1480 aa23.96■■□□□ 1.43
FGFR1-230ENST00000527114 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
FGFR1-230ENST00000527114 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
FGFR1-230ENST00000527114 NESP48681 1621 aa23.73■■□□□ 1.39
FGFR1-230ENST00000527114 KIF21AQ7Z4S6 1674 aa23.67■■□□□ 1.38
FGFR1-230ENST00000527114 ABCC8Q09428 1581 aa23.67■■□□□ 1.38
FGFR1-230ENST00000527114 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
FGFR1-230ENST00000527114 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
FGFR1-230ENST00000527114 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
FGFR1-230ENST00000527114 PDS5BQ9NTI5 1447 aa23.61■■□□□ 1.37
FGFR1-230ENST00000527114 WRNQ14191 1432 aaPredicted RBP eCLIP23.57■■□□□ 1.36
FGFR1-230ENST00000527114 TOP2BQ02880 1626 aa23.57■■□□□ 1.36
FGFR1-230ENST00000527114 CEP164Q9UPV0 1460 aa23.56■■□□□ 1.36
FGFR1-230ENST00000527114 SYNJ1O43426 1573 aa23.55■■□□□ 1.36
FGFR1-230ENST00000527114 CUX1P39880 1505 aa23.49■■□□□ 1.35
FGFR1-230ENST00000527114 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
FGFR1-230ENST00000527114 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
FGFR1-230ENST00000527114 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
FGFR1-230ENST00000527114 THOC2Q8NI27 1593 aaKnown RBP23.38■■□□□ 1.33
FGFR1-230ENST00000527114 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
FGFR1-230ENST00000527114 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
FGFR1-230ENST00000527114 WDR62O43379 1518 aa23.34■■□□□ 1.33
FGFR1-230ENST00000527114 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
FGFR1-230ENST00000527114 FGD5Q6ZNL6 1462 aa23.27■■□□□ 1.32
FGFR1-230ENST00000527114 WDR97A6NE52 1622 aa23.25■■□□□ 1.31
FGFR1-230ENST00000527114 POLA1P09884 1462 aaPredicted RBP23.22■■□□□ 1.31
FGFR1-230ENST00000527114 EEA1Q15075 1411 aa23.16■■□□□ 1.3
FGFR1-230ENST00000527114 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
FGFR1-230ENST00000527114 ABCA10Q8WWZ4 1543 aa23.11■■□□□ 1.29
FGFR1-230ENST00000527114 CUX2O14529 1486 aa23.07■■□□□ 1.28
FGFR1-230ENST00000527114 SOGA1O94964 1423 aa23.06■■□□□ 1.28
FGFR1-230ENST00000527114 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
FGFR1-230ENST00000527114 IFT140Q96RY7 1462 aa23.03■■□□□ 1.28
FGFR1-230ENST00000527114 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
FGFR1-230ENST00000527114 KIF27Q86VH2 1401 aa23.02■■□□□ 1.28
FGFR1-230ENST00000527114 RUSC2Q8N2Y8 1516 aa23■■□□□ 1.27
FGFR1-230ENST00000527114 PBRM1Q86U86 1689 aa22.98■■□□□ 1.27
FGFR1-230ENST00000527114 KIF21BO75037 1637 aa22.94■■□□□ 1.26
FGFR1-230ENST00000527114 CUL7Q14999 1698 aa22.91■■□□□ 1.26
FGFR1-230ENST00000527114 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
FGFR1-230ENST00000527114 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.25
FGFR1-230ENST00000527114 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
FGFR1-230ENST00000527114 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
FGFR1-230ENST00000527114 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
FGFR1-230ENST00000527114 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
FGFR1-230ENST00000527114 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
FGFR1-230ENST00000527114 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
FGFR1-230ENST00000527114 IGF1RP08069 1367 aa22.77■■□□□ 1.24
FGFR1-230ENST00000527114 GRIN2BQ13224 1484 aa22.76■■□□□ 1.23
FGFR1-230ENST00000527114 GOLGA3Q08378 1498 aa22.75■■□□□ 1.23
FGFR1-230ENST00000527114 ADAMTS12P58397 1594 aa22.74■■□□□ 1.23
FGFR1-230ENST00000527114 AQRO60306 1485 aaKnown RBP eCLIP22.74■■□□□ 1.23
FGFR1-230ENST00000527114 MAGI1Q96QZ7 1491 aaPredicted RBP22.68■■□□□ 1.22
FGFR1-230ENST00000527114 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
FGFR1-230ENST00000527114 CTTNBP2Q8WZ74 1663 aa22.66■■□□□ 1.22
FGFR1-230ENST00000527114 CARMIL1Q5VZK9 1371 aa22.66■■□□□ 1.22
FGFR1-230ENST00000527114 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
FGFR1-230ENST00000527114 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
FGFR1-230ENST00000527114 LOC105371045A0A1W2PR82 267 aa22.58■■□□□ 1.2
FGFR1-230ENST00000527114 TNIKQ9UKE5 1360 aa22.56■■□□□ 1.2
FGFR1-230ENST00000527114 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
FGFR1-230ENST00000527114 CHD1O14646 1710 aa22.53■■□□□ 1.2
FGFR1-230ENST00000527114 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
FGFR1-230ENST00000527114 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
FGFR1-230ENST00000527114 CEP162Q5TB80 1403 aa22.39■■□□□ 1.17
FGFR1-230ENST00000527114 CEP170Q5SW79 1584 aa22.39■■□□□ 1.17
FGFR1-230ENST00000527114 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms