RNA–Protein interactions for RNA: ENST00000527018.5

CTSC-204, Transcript of cathepsin C, humanhuman

TSL 5

Gene CTSC, Length 733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-204ENST00000527018 NISCHQ9Y2I1 1504 aa26.52■■□□□ 1.84
CTSC-204ENST00000527018 ABCC9O60706 1549 aa23.94■■□□□ 1.42
CTSC-204ENST00000527018 CCDC180Q9P1Z9 1646 aa23.89■■□□□ 1.42
CTSC-204ENST00000527018 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
CTSC-204ENST00000527018 NACADO15069 1562 aa22.55■■□□□ 1.2
CTSC-204ENST00000527018 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
CTSC-204ENST00000527018 DNAJC5BQ9UF47 199 aa22.44■■□□□ 1.18
CTSC-204ENST00000527018 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
CTSC-204ENST00000527018 PABPN1Q86U42 306 aaKnown RBP eCLIP22.26■■□□□ 1.15
CTSC-204ENST00000527018 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
CTSC-204ENST00000527018 BICRAQ9NZM4 1560 aa22.07■■□□□ 1.12
CTSC-204ENST00000527018 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
CTSC-204ENST00000527018 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
CTSC-204ENST00000527018 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
CTSC-204ENST00000527018 SHROOM4Q9ULL8 1493 aa21.72■■□□□ 1.07
CTSC-204ENST00000527018 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
CTSC-204ENST00000527018 CECR2Q9BXF3 1484 aa21.56■■□□□ 1.04
CTSC-204ENST00000527018 EIF4G1Q04637 1599 aaKnown RBP21.55■■□□□ 1.04
CTSC-204ENST00000527018 NCAPD3P42695 1498 aa20.77■□□□□ 0.92
CTSC-204ENST00000527018 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
CTSC-204ENST00000527018 ATAD2BQ9ULI0 1458 aa20.73■□□□□ 0.91
CTSC-204ENST00000527018 SMARCA2P51531 1590 aa20.71■□□□□ 0.91
CTSC-204ENST00000527018 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
CTSC-204ENST00000527018 HMGXB3Q12766 1538 aa20.67■□□□□ 0.9
CTSC-204ENST00000527018 DNAJC5Q9H3Z4 198 aa20.66■□□□□ 0.9
CTSC-204ENST00000527018 CUX2O14529 1486 aa20.63■□□□□ 0.89
CTSC-204ENST00000527018 BAZ1AQ9NRL2 1556 aaPredicted RBP20.62■□□□□ 0.89
CTSC-204ENST00000527018 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
CTSC-204ENST00000527018 NESP48681 1621 aa20.54■□□□□ 0.88
CTSC-204ENST00000527018 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
CTSC-204ENST00000527018 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
CTSC-204ENST00000527018 LAMC3Q9Y6N6 1575 aa20.38■□□□□ 0.85
CTSC-204ENST00000527018 THOC2Q8NI27 1593 aaKnown RBP20.35■□□□□ 0.85
CTSC-204ENST00000527018 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
CTSC-204ENST00000527018 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
CTSC-204ENST00000527018 WIZO95785 1651 aa20.26■□□□□ 0.83
CTSC-204ENST00000527018 PDS5BQ9NTI5 1447 aa20.25■□□□□ 0.83
CTSC-204ENST00000527018 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
CTSC-204ENST00000527018 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
CTSC-204ENST00000527018 WDR62O43379 1518 aa20.03■□□□□ 0.8
CTSC-204ENST00000527018 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
CTSC-204ENST00000527018 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
CTSC-204ENST00000527018 FANCD2Q9BXW9 1451 aa19.97■□□□□ 0.79
CTSC-204ENST00000527018 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
CTSC-204ENST00000527018 CFTRP13569 1480 aa19.91■□□□□ 0.78
CTSC-204ENST00000527018 PRDM2Q13029 1718 aa19.87■□□□□ 0.77
CTSC-204ENST00000527018 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
CTSC-204ENST00000527018 URB2Q14146 1524 aaKnown RBP19.81■□□□□ 0.76
CTSC-204ENST00000527018 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
CTSC-204ENST00000527018 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
CTSC-204ENST00000527018 OSCARQ8IYS5 282 aa19.68■□□□□ 0.74
CTSC-204ENST00000527018 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
CTSC-204ENST00000527018 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
CTSC-204ENST00000527018 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
CTSC-204ENST00000527018 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
CTSC-204ENST00000527018 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
CTSC-204ENST00000527018 EIF4G3O43432 1585 aaKnown RBP19.51■□□□□ 0.71
CTSC-204ENST00000527018 RIMBP3CA6NJZ7 1639 aa19.49■□□□□ 0.71
CTSC-204ENST00000527018 RIMBP3BA6NNM3 1639 aa19.49■□□□□ 0.71
CTSC-204ENST00000527018 RIMBP3Q9UFD9 1639 aa19.49■□□□□ 0.71
CTSC-204ENST00000527018 CHD1O14646 1710 aa19.44■□□□□ 0.7
CTSC-204ENST00000527018 TARBP1Q13395 1621 aaKnown RBP19.43■□□□□ 0.7
CTSC-204ENST00000527018 AQRO60306 1485 aaKnown RBP eCLIP19.39■□□□□ 0.698e-7■■■■■ 32.9
CTSC-204ENST00000527018 ARHGEF11O15085 1522 aa19.39■□□□□ 0.69
CTSC-204ENST00000527018 POLA1P09884 1462 aaPredicted RBP19.37■□□□□ 0.69
CTSC-204ENST00000527018 FBLN2P98095 1184 aa19.33■□□□□ 0.68
CTSC-204ENST00000527018 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
CTSC-204ENST00000527018 SOGA1O94964 1423 aa19.28■□□□□ 0.68
CTSC-204ENST00000527018 TDRD9Q8NDG6 1382 aaKnown RBP19.26■□□□□ 0.67
CTSC-204ENST00000527018 FGD5Q6ZNL6 1462 aa19.26■□□□□ 0.67
CTSC-204ENST00000527018 CYB5RLQ6IPT4 315 aa19.24■□□□□ 0.67
CTSC-204ENST00000527018 CUX1P39880 1505 aa19.22■□□□□ 0.67
CTSC-204ENST00000527018 WDR97A6NE52 1622 aa19.22■□□□□ 0.67
CTSC-204ENST00000527018 SNAPC4Q5SXM2 1469 aa19.21■□□□□ 0.67
CTSC-204ENST00000527018 ARAP1Q96P48 1450 aa19.18■□□□□ 0.66
CTSC-204ENST00000527018 PBRM1Q86U86 1689 aa19.15■□□□□ 0.66
CTSC-204ENST00000527018 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
CTSC-204ENST00000527018 SYNJ1O43426 1573 aa19.14■□□□□ 0.65
CTSC-204ENST00000527018 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
CTSC-204ENST00000527018 GRIN2BQ13224 1484 aa19.13■□□□□ 0.65
CTSC-204ENST00000527018 MAGI1Q96QZ7 1491 aaPredicted RBP19.13■□□□□ 0.65
CTSC-204ENST00000527018 CLASP1Q7Z460 1538 aa19.1■□□□□ 0.65
CTSC-204ENST00000527018 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
CTSC-204ENST00000527018 SYNJ2O15056 1496 aa19.07■□□□□ 0.64
CTSC-204ENST00000527018 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
CTSC-204ENST00000527018 ABCA5Q8WWZ7 1642 aa19.03■□□□□ 0.64
CTSC-204ENST00000527018 ABCA10Q8WWZ4 1543 aa19.01■□□□□ 0.63
CTSC-204ENST00000527018 BIVM-ERCC5R4GMW8 1640 aa18.94■□□□□ 0.62
CTSC-204ENST00000527018 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.62
CTSC-204ENST00000527018 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
CTSC-204ENST00000527018 ADAMTS12P58397 1594 aa18.89■□□□□ 0.62
CTSC-204ENST00000527018 GRIN2AQ12879 1464 aa18.89■□□□□ 0.61
CTSC-204ENST00000527018 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
CTSC-204ENST00000527018 ERCC6L2Q5T890 1561 aa18.83■□□□□ 0.6
CTSC-204ENST00000527018 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
CTSC-204ENST00000527018 NUP160Q12769 1436 aa18.79■□□□□ 0.6
CTSC-204ENST00000527018 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
CTSC-204ENST00000527018 SHROOM2Q13796 1616 aa18.76■□□□□ 0.59
CTSC-204ENST00000527018 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
CTSC-204ENST00000527018 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms