RNA–Protein interactions for RNA: ENST00000526592.5

SDHD-203, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-203ENST00000526592 NISCHQ9Y2I1 1504 aa23.07■■□□□ 1.28
SDHD-203ENST00000526592 AEBP2Q6ZN18 517 aaPredicted RBP22.55■■□□□ 1.2
SDHD-203ENST00000526592 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
SDHD-203ENST00000526592 CCDC180Q9P1Z9 1646 aa20.72■□□□□ 0.91
SDHD-203ENST00000526592 ABCC9O60706 1549 aa20.71■□□□□ 0.91
SDHD-203ENST00000526592 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
SDHD-203ENST00000526592 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
SDHD-203ENST00000526592 NACADO15069 1562 aa19.57■□□□□ 0.72
SDHD-203ENST00000526592 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
SDHD-203ENST00000526592 DCAF8L2P0C7V8 631 aa19.37■□□□□ 0.69
SDHD-203ENST00000526592 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
SDHD-203ENST00000526592 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
SDHD-203ENST00000526592 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
SDHD-203ENST00000526592 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
SDHD-203ENST00000526592 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
SDHD-203ENST00000526592 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
SDHD-203ENST00000526592 DCAF1Q9Y4B6 1507 aa19.06■□□□□ 0.64
SDHD-203ENST00000526592 SHROOM4Q9ULL8 1493 aa18.89■□□□□ 0.61
SDHD-203ENST00000526592 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
SDHD-203ENST00000526592 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
SDHD-203ENST00000526592 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
SDHD-203ENST00000526592 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
SDHD-203ENST00000526592 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
SDHD-203ENST00000526592 NCAPD3P42695 1498 aa18.07■□□□□ 0.48
SDHD-203ENST00000526592 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.48
SDHD-203ENST00000526592 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
SDHD-203ENST00000526592 SMARCA2P51531 1590 aa17.96■□□□□ 0.46
SDHD-203ENST00000526592 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
SDHD-203ENST00000526592 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
SDHD-203ENST00000526592 CUX2O14529 1486 aa17.86■□□□□ 0.45
SDHD-203ENST00000526592 ERCC6Q03468 1493 aa17.85■□□□□ 0.45
SDHD-203ENST00000526592 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
SDHD-203ENST00000526592 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
SDHD-203ENST00000526592 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
SDHD-203ENST00000526592 NESP48681 1621 aa17.81■□□□□ 0.44
SDHD-203ENST00000526592 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
SDHD-203ENST00000526592 FOXD1Q16676 465 aa17.69■□□□□ 0.42
SDHD-203ENST00000526592 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
SDHD-203ENST00000526592 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
SDHD-203ENST00000526592 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
SDHD-203ENST00000526592 WIZO95785 1651 aa17.58■□□□□ 0.4
SDHD-203ENST00000526592 PDS5BQ9NTI5 1447 aa17.53■□□□□ 0.4
SDHD-203ENST00000526592 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
SDHD-203ENST00000526592 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
SDHD-203ENST00000526592 WDR62O43379 1518 aa17.4■□□□□ 0.38
SDHD-203ENST00000526592 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.38
SDHD-203ENST00000526592 TOP2AP11388 1531 aaKnown RBP17.34■□□□□ 0.37
SDHD-203ENST00000526592 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.37
SDHD-203ENST00000526592 CFTRP13569 1480 aa17.32■□□□□ 0.36
SDHD-203ENST00000526592 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
SDHD-203ENST00000526592 ADRA2BP18089 450 aa17.25■□□□□ 0.35
SDHD-203ENST00000526592 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
SDHD-203ENST00000526592 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.34
SDHD-203ENST00000526592 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
SDHD-203ENST00000526592 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
SDHD-203ENST00000526592 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
SDHD-203ENST00000526592 TOPBP1Q92547 1522 aa17■□□□□ 0.31
SDHD-203ENST00000526592 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
SDHD-203ENST00000526592 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
SDHD-203ENST00000526592 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
SDHD-203ENST00000526592 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
SDHD-203ENST00000526592 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
SDHD-203ENST00000526592 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
SDHD-203ENST00000526592 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
SDHD-203ENST00000526592 RIMBP3CA6NJZ7 1639 aa16.85■□□□□ 0.29
SDHD-203ENST00000526592 RIMBP3BA6NNM3 1639 aa16.85■□□□□ 0.29
SDHD-203ENST00000526592 RIMBP3Q9UFD9 1639 aa16.85■□□□□ 0.29
SDHD-203ENST00000526592 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
SDHD-203ENST00000526592 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.287e-7■■□□□ 14.1
SDHD-203ENST00000526592 CHD1O14646 1710 aa16.79■□□□□ 0.28
SDHD-203ENST00000526592 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
SDHD-203ENST00000526592 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
SDHD-203ENST00000526592 PIAS4Q8N2W9 510 aaPredicted RBP16.73■□□□□ 0.27
SDHD-203ENST00000526592 CUX1P39880 1505 aa16.72■□□□□ 0.27
SDHD-203ENST00000526592 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
SDHD-203ENST00000526592 SOGA1O94964 1423 aa16.7■□□□□ 0.26
SDHD-203ENST00000526592 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
SDHD-203ENST00000526592 WDR97A6NE52 1622 aa16.68■□□□□ 0.26
SDHD-203ENST00000526592 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
SDHD-203ENST00000526592 FBLN2P98095 1184 aa16.63■□□□□ 0.25
SDHD-203ENST00000526592 ARAP1Q96P48 1450 aa16.62■□□□□ 0.25
SDHD-203ENST00000526592 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
SDHD-203ENST00000526592 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
SDHD-203ENST00000526592 MAGI1Q96QZ7 1491 aaPredicted RBP16.59■□□□□ 0.25
SDHD-203ENST00000526592 GRIN2BQ13224 1484 aa16.58■□□□□ 0.24
SDHD-203ENST00000526592 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
SDHD-203ENST00000526592 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
SDHD-203ENST00000526592 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
SDHD-203ENST00000526592 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
SDHD-203ENST00000526592 SUPT5HO00267 1087 aaKnown RBP16.53■□□□□ 0.24
SDHD-203ENST00000526592 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
SDHD-203ENST00000526592 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
SDHD-203ENST00000526592 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.24
SDHD-203ENST00000526592 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
SDHD-203ENST00000526592 TOP2BQ02880 1626 aa16.43■□□□□ 0.22
SDHD-203ENST00000526592 WRNQ14191 1432 aaPredicted RBP eCLIP16.42■□□□□ 0.22
SDHD-203ENST00000526592 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
SDHD-203ENST00000526592 GRIN2AQ12879 1464 aa16.38■□□□□ 0.21
SDHD-203ENST00000526592 TRHP20396 242 aaPredicted RBP16.38■□□□□ 0.21
SDHD-203ENST00000526592 CEP170Q5SW79 1584 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms