RNA–Protein interactions for RNA: ENST00000526494.5

CAPRIN1-204, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-204ENST00000526494 NISCHQ9Y2I1 1504 aa36.78■■■■□ 3.48
CAPRIN1-204ENST00000526494 CCDC180Q9P1Z9 1646 aa32.22■■■□□ 2.75
CAPRIN1-204ENST00000526494 ABCC9O60706 1549 aa30.97■■■□□ 2.55
CAPRIN1-204ENST00000526494 ZCCHC6Q5VYS8 1495 aaKnown RBP30.8■■■□□ 2.52
CAPRIN1-204ENST00000526494 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
CAPRIN1-204ENST00000526494 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
CAPRIN1-204ENST00000526494 MYO15BQ96JP2 1530 aa30.22■■■□□ 2.43
CAPRIN1-204ENST00000526494 NACADO15069 1562 aa30.19■■■□□ 2.42
CAPRIN1-204ENST00000526494 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
CAPRIN1-204ENST00000526494 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
CAPRIN1-204ENST00000526494 SCRIBQ14160 1630 aa29.6■■■□□ 2.33
CAPRIN1-204ENST00000526494 UNC13AQ9UPW8 1703 aa29.19■■■□□ 2.26
CAPRIN1-204ENST00000526494 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
CAPRIN1-204ENST00000526494 BICRAQ9NZM4 1560 aa29.08■■■□□ 2.25
CAPRIN1-204ENST00000526494 CECR2Q9BXF3 1484 aa28.61■■■□□ 2.17
CAPRIN1-204ENST00000526494 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
CAPRIN1-204ENST00000526494 SUPT5HO00267 1087 aaKnown RBP28.4■■■□□ 2.14
CAPRIN1-204ENST00000526494 MROH2BQ7Z745 1585 aa28.39■■■□□ 2.14
CAPRIN1-204ENST00000526494 RSF1Q96T23 1441 aaPredicted RBP28.38■■■□□ 2.13
CAPRIN1-204ENST00000526494 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
CAPRIN1-204ENST00000526494 EIF4G1Q04637 1599 aaKnown RBP28.27■■■□□ 2.12
CAPRIN1-204ENST00000526494 WIZO95785 1651 aa28.07■■■□□ 2.08
CAPRIN1-204ENST00000526494 ATAD2BQ9ULI0 1458 aa28.04■■■□□ 2.08
CAPRIN1-204ENST00000526494 SMARCA2P51531 1590 aa28■■■□□ 2.07
CAPRIN1-204ENST00000526494 PEG3Q9GZU2 1588 aa28■■■□□ 2.07
CAPRIN1-204ENST00000526494 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.06
CAPRIN1-204ENST00000526494 NCAPD3P42695 1498 aa27.89■■■□□ 2.05
CAPRIN1-204ENST00000526494 BAZ1BQ9UIG0 1483 aaKnown RBP27.87■■■□□ 2.05
CAPRIN1-204ENST00000526494 TOP2AP11388 1531 aaKnown RBP27.85■■■□□ 2.05
CAPRIN1-204ENST00000526494 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
CAPRIN1-204ENST00000526494 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
CAPRIN1-204ENST00000526494 CCDC88BA6NC98 1476 aa27.56■■■□□ 2
CAPRIN1-204ENST00000526494 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
CAPRIN1-204ENST00000526494 CFTRP13569 1480 aa27.13■■□□□ 1.93
CAPRIN1-204ENST00000526494 NESP48681 1621 aa27.01■■□□□ 1.92
CAPRIN1-204ENST00000526494 LAMC3Q9Y6N6 1575 aa26.97■■□□□ 1.91
CAPRIN1-204ENST00000526494 CHIC1Q5VXU3 224 aa26.93■■□□□ 1.9
CAPRIN1-204ENST00000526494 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
CAPRIN1-204ENST00000526494 FANCD2Q9BXW9 1451 aa26.84■■□□□ 1.89
CAPRIN1-204ENST00000526494 ABCC8Q09428 1581 aa26.79■■□□□ 1.88
CAPRIN1-204ENST00000526494 PRDM2Q13029 1718 aa26.77■■□□□ 1.88
CAPRIN1-204ENST00000526494 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
CAPRIN1-204ENST00000526494 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.87
CAPRIN1-204ENST00000526494 CEP164Q9UPV0 1460 aa26.72■■□□□ 1.87
CAPRIN1-204ENST00000526494 ERCC6Q03468 1493 aa26.63■■□□□ 1.85
CAPRIN1-204ENST00000526494 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
CAPRIN1-204ENST00000526494 KIF21AQ7Z4S6 1674 aa26.58■■□□□ 1.85
CAPRIN1-204ENST00000526494 CUX1P39880 1505 aa26.58■■□□□ 1.85
CAPRIN1-204ENST00000526494 TOP2BQ02880 1626 aa26.51■■□□□ 1.83
CAPRIN1-204ENST00000526494 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
CAPRIN1-204ENST00000526494 URB2Q14146 1524 aaKnown RBP26.5■■□□□ 1.83
CAPRIN1-204ENST00000526494 DNMBPQ6XZF7 1577 aa26.48■■□□□ 1.83
CAPRIN1-204ENST00000526494 TOPBP1Q92547 1522 aa26.48■■□□□ 1.83
CAPRIN1-204ENST00000526494 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
CAPRIN1-204ENST00000526494 FGD5Q6ZNL6 1462 aa26.38■■□□□ 1.81
CAPRIN1-204ENST00000526494 WDR62O43379 1518 aa26.34■■□□□ 1.81
CAPRIN1-204ENST00000526494 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.8
CAPRIN1-204ENST00000526494 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
CAPRIN1-204ENST00000526494 SOGA1O94964 1423 aa26.27■■□□□ 1.8
CAPRIN1-204ENST00000526494 FAM9AQ8IZU1 332 aaPredicted RBP26.25■■□□□ 1.79
CAPRIN1-204ENST00000526494 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
CAPRIN1-204ENST00000526494 CUX2O14529 1486 aa26.17■■□□□ 1.78
CAPRIN1-204ENST00000526494 EEA1Q15075 1411 aa26.14■■□□□ 1.78
CAPRIN1-204ENST00000526494 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.78
CAPRIN1-204ENST00000526494 KIF27Q86VH2 1401 aa26.14■■□□□ 1.77
CAPRIN1-204ENST00000526494 ABCA10Q8WWZ4 1543 aa26.13■■□□□ 1.77
CAPRIN1-204ENST00000526494 IFT140Q96RY7 1462 aa26.12■■□□□ 1.77
CAPRIN1-204ENST00000526494 TARBP1Q13395 1621 aaKnown RBP26.06■■□□□ 1.76
CAPRIN1-204ENST00000526494 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
CAPRIN1-204ENST00000526494 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
CAPRIN1-204ENST00000526494 WDR97A6NE52 1622 aa25.98■■□□□ 1.75
CAPRIN1-204ENST00000526494 ZNF608Q9ULD9 1512 aaPredicted RBP25.95■■□□□ 1.74
CAPRIN1-204ENST00000526494 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
CAPRIN1-204ENST00000526494 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.74
CAPRIN1-204ENST00000526494 IGF1RP08069 1367 aa25.93■■□□□ 1.74
CAPRIN1-204ENST00000526494 ABCA5Q8WWZ7 1642 aa25.91■■□□□ 1.74
CAPRIN1-204ENST00000526494 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.74
CAPRIN1-204ENST00000526494 LOC105371045A0A1W2PR82 267 aa25.87■■□□□ 1.73
CAPRIN1-204ENST00000526494 GRIN2BQ13224 1484 aa25.84■■□□□ 1.73
CAPRIN1-204ENST00000526494 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
CAPRIN1-204ENST00000526494 ERICH3Q5RHP9 1530 aa25.81■■□□□ 1.72
CAPRIN1-204ENST00000526494 CARMIL1Q5VZK9 1371 aa25.81■■□□□ 1.72
CAPRIN1-204ENST00000526494 PRXQ9BXM0 1461 aa25.8■■□□□ 1.72
CAPRIN1-204ENST00000526494 KIF21BO75037 1637 aa25.75■■□□□ 1.71
CAPRIN1-204ENST00000526494 GOLGA3Q08378 1498 aa25.75■■□□□ 1.71
CAPRIN1-204ENST00000526494 RAPGEF2Q9Y4G8 1499 aa25.72■■□□□ 1.71
CAPRIN1-204ENST00000526494 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
CAPRIN1-204ENST00000526494 UBTFP17480 764 aaKnown RBP25.7■■□□□ 1.7
CAPRIN1-204ENST00000526494 SNAPC4Q5SXM2 1469 aa25.7■■□□□ 1.7
CAPRIN1-204ENST00000526494 CUL7Q14999 1698 aa25.7■■□□□ 1.7
CAPRIN1-204ENST00000526494 FHAD1B1AJZ9 1412 aa25.69■■□□□ 1.7
CAPRIN1-204ENST00000526494 MAGI1Q96QZ7 1491 aaPredicted RBP25.65■■□□□ 1.7
CAPRIN1-204ENST00000526494 ADAMTS12P58397 1594 aa25.63■■□□□ 1.69
CAPRIN1-204ENST00000526494 TNIKQ9UKE5 1360 aa25.58■■□□□ 1.69
CAPRIN1-204ENST00000526494 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
CAPRIN1-204ENST00000526494 SYNJ2O15056 1496 aa25.56■■□□□ 1.68
CAPRIN1-204ENST00000526494 FBLN2P98095 1184 aa25.56■■□□□ 1.68
CAPRIN1-204ENST00000526494 GRIN2AQ12879 1464 aa25.49■■□□□ 1.67
CAPRIN1-204ENST00000526494 RANGAP1P46060 587 aaPredicted RBP25.42■■□□□ 1.66
CAPRIN1-204ENST00000526494 CEP162Q5TB80 1403 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms