RNA–Protein interactions for RNA: ENST00000526358.5

SWAP70-204, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 5

Gene SWAP70, Length 813 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-204ENST00000526358 NISCHQ9Y2I1 1504 aa43.27■■■■■ 4.52
SWAP70-204ENST00000526358 ABCC9O60706 1549 aa39.5■■■■□ 3.91
SWAP70-204ENST00000526358 CCDC180Q9P1Z9 1646 aa39.22■■■■□ 3.87
SWAP70-204ENST00000526358 RB1CC1Q8TDY2 1594 aa37.51■■■■□ 3.59
SWAP70-204ENST00000526358 DNAJC5BQ9UF47 199 aa37.32■■■■□ 3.56
SWAP70-204ENST00000526358 NACADO15069 1562 aa37.12■■■■□ 3.53
SWAP70-204ENST00000526358 UNC13AQ9UPW8 1703 aa36.65■■■■□ 3.46
SWAP70-204ENST00000526358 PABPN1Q86U42 306 aaKnown RBP eCLIP36.56■■■■□ 3.44
SWAP70-204ENST00000526358 DCAF8L2P0C7V8 631 aa36.53■■■■□ 3.44
SWAP70-204ENST00000526358 MYO15BQ96JP2 1530 aa36.47■■■■□ 3.43
SWAP70-204ENST00000526358 BICRAQ9NZM4 1560 aa36.36■■■■□ 3.41
SWAP70-204ENST00000526358 SHROOM4Q9ULL8 1493 aa35.99■■■■□ 3.35
SWAP70-204ENST00000526358 ZCCHC6Q5VYS8 1495 aaKnown RBP35.81■■■■□ 3.32
SWAP70-204ENST00000526358 DCAF1Q9Y4B6 1507 aa35.8■■■■□ 3.32
SWAP70-204ENST00000526358 CC2D2AQ9P2K1 1620 aa35.72■■■■□ 3.31
SWAP70-204ENST00000526358 CECR2Q9BXF3 1484 aa35.67■■■■□ 3.3
SWAP70-204ENST00000526358 SCRIBQ14160 1630 aa35.57■■■■□ 3.29
SWAP70-204ENST00000526358 EIF4G1Q04637 1599 aaKnown RBP35.55■■■■□ 3.28
SWAP70-204ENST00000526358 DNAJC5Q9H3Z4 198 aa34.74■■■■□ 3.15
SWAP70-204ENST00000526358 CUX2O14529 1486 aa34.38■■■■□ 3.09
SWAP70-204ENST00000526358 ERCC6Q03468 1493 aa34.21■■■■□ 3.07
SWAP70-204ENST00000526358 NCAPD3P42695 1498 aa34.2■■■■□ 3.06
SWAP70-204ENST00000526358 ATAD2BQ9ULI0 1458 aa34.01■■■■□ 3.04
SWAP70-204ENST00000526358 HMGXB3Q12766 1538 aa34■■■■□ 3.03
SWAP70-204ENST00000526358 SMARCA2P51531 1590 aa33.98■■■■□ 3.03
SWAP70-204ENST00000526358 SMARCA4P51532 1647 aa33.92■■■■□ 3.02
SWAP70-204ENST00000526358 NESP48681 1621 aa33.76■■■■□ 3
SWAP70-204ENST00000526358 BAZ1BQ9UIG0 1483 aaKnown RBP33.7■■■□□ 2.99
SWAP70-204ENST00000526358 BAZ1AQ9NRL2 1556 aaPredicted RBP33.69■■■□□ 2.98
SWAP70-204ENST00000526358 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
SWAP70-204ENST00000526358 PEG3Q9GZU2 1588 aa33.63■■■□□ 2.97
SWAP70-204ENST00000526358 LAMC3Q9Y6N6 1575 aa33.6■■■□□ 2.97
SWAP70-204ENST00000526358 KIF21AQ7Z4S6 1674 aa33.43■■■□□ 2.94
SWAP70-204ENST00000526358 PDS5BQ9NTI5 1447 aa33.36■■■□□ 2.93
SWAP70-204ENST00000526358 MROH2BQ7Z745 1585 aa33.3■■■□□ 2.92
SWAP70-204ENST00000526358 MRC2Q9UBG0 1479 aa33.12■■■□□ 2.89
SWAP70-204ENST00000526358 CADPSQ9ULU8 1353 aa33.1■■■□□ 2.89
SWAP70-204ENST00000526358 WDR62O43379 1518 aa33.09■■■□□ 2.89
SWAP70-204ENST00000526358 TRIM41Q8WV44 630 aa32.99■■■□□ 2.87
SWAP70-204ENST00000526358 CEP164Q9UPV0 1460 aa32.9■■■□□ 2.86
SWAP70-204ENST00000526358 WIZO95785 1651 aa32.9■■■□□ 2.86
SWAP70-204ENST00000526358 FANCD2Q9BXW9 1451 aa32.77■■■□□ 2.84
SWAP70-204ENST00000526358 CFTRP13569 1480 aa32.67■■■□□ 2.82
SWAP70-204ENST00000526358 OSCARQ8IYS5 282 aa32.55■■■□□ 2.8
SWAP70-204ENST00000526358 TOP2AP11388 1531 aaKnown RBP32.52■■■□□ 2.8
SWAP70-204ENST00000526358 URB2Q14146 1524 aaKnown RBP32.51■■■□□ 2.8
SWAP70-204ENST00000526358 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
SWAP70-204ENST00000526358 RSF1Q96T23 1441 aaPredicted RBP32.4■■■□□ 2.78
SWAP70-204ENST00000526358 RIMBP3CA6NJZ7 1639 aa32.31■■■□□ 2.76
SWAP70-204ENST00000526358 RIMBP3BA6NNM3 1639 aa32.31■■■□□ 2.76
SWAP70-204ENST00000526358 RIMBP3Q9UFD9 1639 aa32.31■■■□□ 2.76
SWAP70-204ENST00000526358 IFT140Q96RY7 1462 aa32.25■■■□□ 2.75
SWAP70-204ENST00000526358 ZNF608Q9ULD9 1512 aaPredicted RBP32.16■■■□□ 2.74
SWAP70-204ENST00000526358 ARHGEF11O15085 1522 aa32.16■■■□□ 2.74
SWAP70-204ENST00000526358 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
SWAP70-204ENST00000526358 EIF4G3O43432 1585 aaKnown RBP32.09■■■□□ 2.73
SWAP70-204ENST00000526358 ABCC8Q09428 1581 aa32.05■■■□□ 2.72
SWAP70-204ENST00000526358 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
SWAP70-204ENST00000526358 DNMBPQ6XZF7 1577 aa31.99■■■□□ 2.71
SWAP70-204ENST00000526358 CHD1O14646 1710 aa31.93■■■□□ 2.7
SWAP70-204ENST00000526358 TARBP1Q13395 1621 aaKnown RBP31.87■■■□□ 2.69
SWAP70-204ENST00000526358 CYB5RLQ6IPT4 315 aa31.78■■■□□ 2.68
SWAP70-204ENST00000526358 AQRO60306 1485 aaKnown RBP eCLIP31.78■■■□□ 2.68
SWAP70-204ENST00000526358 ARAP1Q96P48 1450 aa31.78■■■□□ 2.68
SWAP70-204ENST00000526358 POLA1P09884 1462 aaPredicted RBP31.74■■■□□ 2.67
SWAP70-204ENST00000526358 WDR97A6NE52 1622 aa31.65■■■□□ 2.66
SWAP70-204ENST00000526358 FBLN2P98095 1184 aa31.63■■■□□ 2.65
SWAP70-204ENST00000526358 TRHP20396 242 aaPredicted RBP31.62■■■□□ 2.65
SWAP70-204ENST00000526358 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
SWAP70-204ENST00000526358 CLASP1Q7Z460 1538 aa31.54■■■□□ 2.64
SWAP70-204ENST00000526358 SNAPC4Q5SXM2 1469 aa31.53■■■□□ 2.64
SWAP70-204ENST00000526358 SYNJ1O43426 1573 aa31.51■■■□□ 2.64
SWAP70-204ENST00000526358 SOGA1O94964 1423 aa31.51■■■□□ 2.64
SWAP70-204ENST00000526358 TDRD9Q8NDG6 1382 aaKnown RBP31.48■■■□□ 2.63
SWAP70-204ENST00000526358 MAGI1Q96QZ7 1491 aaPredicted RBP31.47■■■□□ 2.63
SWAP70-204ENST00000526358 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
SWAP70-204ENST00000526358 GRIN2BQ13224 1484 aa31.38■■■□□ 2.61
SWAP70-204ENST00000526358 SYNJ2O15056 1496 aa31.35■■■□□ 2.61
SWAP70-204ENST00000526358 CHMP7Q8WUX9 453 aaPredicted RBP31.35■■■□□ 2.61
SWAP70-204ENST00000526358 CUX1P39880 1505 aa31.34■■■□□ 2.61
SWAP70-204ENST00000526358 PBRM1Q86U86 1689 aa31.3■■■□□ 2.6
SWAP70-204ENST00000526358 GAPVD1Q14C86 1478 aa31.19■■■□□ 2.58
SWAP70-204ENST00000526358 ABCA5Q8WWZ7 1642 aa31.15■■■□□ 2.58
SWAP70-204ENST00000526358 AEBP2Q6ZN18 517 aaPredicted RBP31.11■■■□□ 2.57
SWAP70-204ENST00000526358 ABCA10Q8WWZ4 1543 aa31.1■■■□□ 2.57
SWAP70-204ENST00000526358 GRIN2AQ12879 1464 aa30.98■■■□□ 2.55
SWAP70-204ENST00000526358 ADAMTS12P58397 1594 aa30.96■■■□□ 2.55
SWAP70-204ENST00000526358 ERCC6L2Q5T890 1561 aa30.92■■■□□ 2.54
SWAP70-204ENST00000526358 CEP170Q5SW79 1584 aa30.9■■■□□ 2.54
SWAP70-204ENST00000526358 NUP160Q12769 1436 aa30.9■■■□□ 2.54
SWAP70-204ENST00000526358 SHROOM2Q13796 1616 aa30.87■■■□□ 2.53
SWAP70-204ENST00000526358 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
SWAP70-204ENST00000526358 BIVM-ERCC5R4GMW8 1640 aa30.8■■■□□ 2.52
SWAP70-204ENST00000526358 FHAD1B1AJZ9 1412 aa30.78■■■□□ 2.52
SWAP70-204ENST00000526358 TOP2BQ02880 1626 aa30.76■■■□□ 2.52
SWAP70-204ENST00000526358 ERICH3Q5RHP9 1530 aa30.73■■■□□ 2.51
SWAP70-204ENST00000526358 KIF13AQ9H1H9 1805 aa30.72■■■□□ 2.51
SWAP70-204ENST00000526358 PRG4Q92954 1404 aaPredicted RBP30.58■■■□□ 2.49
SWAP70-204ENST00000526358 RUSC2Q8N2Y8 1516 aa30.55■■■□□ 2.48
SWAP70-204ENST00000526358 MAPKBP1O60336 1514 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 224.4 ms