RNA–Protein interactions for RNA: ENST00000525948.5

PUM1-215, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-215ENST00000525948 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
PUM1-215ENST00000525948 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
PUM1-215ENST00000525948 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
PUM1-215ENST00000525948 ABCC9O60706 1549 aa24.3■■□□□ 1.48
PUM1-215ENST00000525948 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
PUM1-215ENST00000525948 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
PUM1-215ENST00000525948 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
PUM1-215ENST00000525948 NACADO15069 1562 aa22.67■■□□□ 1.22
PUM1-215ENST00000525948 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
PUM1-215ENST00000525948 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
PUM1-215ENST00000525948 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
PUM1-215ENST00000525948 BICRAQ9NZM4 1560 aa22.36■■□□□ 1.17
PUM1-215ENST00000525948 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.17
PUM1-215ENST00000525948 PHF23Q9BUL5 403 aaPredicted RBP22.22■■□□□ 1.15
PUM1-215ENST00000525948 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
PUM1-215ENST00000525948 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
PUM1-215ENST00000525948 SHROOM4Q9ULL8 1493 aa21.95■■□□□ 1.1
PUM1-215ENST00000525948 CECR2Q9BXF3 1484 aa21.92■■□□□ 1.1
PUM1-215ENST00000525948 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.09
PUM1-215ENST00000525948 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
PUM1-215ENST00000525948 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
PUM1-215ENST00000525948 DCAF1Q9Y4B6 1507 aa21.78■■□□□ 1.08
PUM1-215ENST00000525948 DNAJC5Q9H3Z4 198 aa21.49■■□□□ 1.03
PUM1-215ENST00000525948 CUX2O14529 1486 aa21.11■□□□□ 0.97
PUM1-215ENST00000525948 ERCC6Q03468 1493 aa21■□□□□ 0.95
PUM1-215ENST00000525948 NCAPD3P42695 1498 aa20.9■□□□□ 0.94
PUM1-215ENST00000525948 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
PUM1-215ENST00000525948 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
PUM1-215ENST00000525948 NESP48681 1621 aa20.78■□□□□ 0.92
PUM1-215ENST00000525948 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
PUM1-215ENST00000525948 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
PUM1-215ENST00000525948 THOC2Q8NI27 1593 aaKnown RBP20.73■□□□□ 0.91
PUM1-215ENST00000525948 FOXD1Q16676 465 aa20.71■□□□□ 0.91
PUM1-215ENST00000525948 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
PUM1-215ENST00000525948 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.89
PUM1-215ENST00000525948 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
PUM1-215ENST00000525948 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
PUM1-215ENST00000525948 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
PUM1-215ENST00000525948 BAZ1AQ9NRL2 1556 aaPredicted RBP20.53■□□□□ 0.88
PUM1-215ENST00000525948 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
PUM1-215ENST00000525948 PDS5BQ9NTI5 1447 aa20.37■□□□□ 0.85
PUM1-215ENST00000525948 MROH2BQ7Z745 1585 aa20.37■□□□□ 0.85
PUM1-215ENST00000525948 WDR62O43379 1518 aa20.29■□□□□ 0.84
PUM1-215ENST00000525948 MRC2Q9UBG0 1479 aa20.29■□□□□ 0.84
PUM1-215ENST00000525948 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
PUM1-215ENST00000525948 WIZO95785 1651 aa20.14■□□□□ 0.81
PUM1-215ENST00000525948 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
PUM1-215ENST00000525948 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
PUM1-215ENST00000525948 OSCARQ8IYS5 282 aa19.96■□□□□ 0.79
PUM1-215ENST00000525948 CFTRP13569 1480 aa19.95■□□□□ 0.78
PUM1-215ENST00000525948 URB2Q14146 1524 aaKnown RBP19.94■□□□□ 0.78
PUM1-215ENST00000525948 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
PUM1-215ENST00000525948 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
PUM1-215ENST00000525948 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
PUM1-215ENST00000525948 PRDM2Q13029 1718 aa19.87■□□□□ 0.77
PUM1-215ENST00000525948 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
PUM1-215ENST00000525948 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
PUM1-215ENST00000525948 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
PUM1-215ENST00000525948 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
PUM1-215ENST00000525948 IFT140Q96RY7 1462 aa19.71■□□□□ 0.75
PUM1-215ENST00000525948 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
PUM1-215ENST00000525948 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
PUM1-215ENST00000525948 ADRA2BP18089 450 aa19.67■□□□□ 0.74
PUM1-215ENST00000525948 CHD1O14646 1710 aa19.66■□□□□ 0.74
PUM1-215ENST00000525948 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
PUM1-215ENST00000525948 ARAP1Q96P48 1450 aa19.58■□□□□ 0.72
PUM1-215ENST00000525948 DNMBPQ6XZF7 1577 aa19.56■□□□□ 0.72
PUM1-215ENST00000525948 CCDC88BA6NC98 1476 aa19.55■□□□□ 0.72
PUM1-215ENST00000525948 CYB5RLQ6IPT4 315 aa19.55■□□□□ 0.72
PUM1-215ENST00000525948 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
PUM1-215ENST00000525948 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
PUM1-215ENST00000525948 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
PUM1-215ENST00000525948 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.718e-9■■■□□ 19.2
PUM1-215ENST00000525948 TRHP20396 242 aaPredicted RBP19.46■□□□□ 0.71
PUM1-215ENST00000525948 POLA1P09884 1462 aaPredicted RBP19.42■□□□□ 0.7
PUM1-215ENST00000525948 FBLN2P98095 1184 aa19.37■□□□□ 0.69
PUM1-215ENST00000525948 CLASP1Q7Z460 1538 aa19.36■□□□□ 0.69
PUM1-215ENST00000525948 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
PUM1-215ENST00000525948 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
PUM1-215ENST00000525948 MSH5O43196 834 aa19.31■□□□□ 0.68
PUM1-215ENST00000525948 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
PUM1-215ENST00000525948 SYNJ1O43426 1573 aa19.28■□□□□ 0.68
PUM1-215ENST00000525948 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
PUM1-215ENST00000525948 SOGA1O94964 1423 aa19.25■□□□□ 0.67
PUM1-215ENST00000525948 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
PUM1-215ENST00000525948 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
PUM1-215ENST00000525948 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
PUM1-215ENST00000525948 CUX1P39880 1505 aa19.17■□□□□ 0.66
PUM1-215ENST00000525948 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
PUM1-215ENST00000525948 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
PUM1-215ENST00000525948 CHMP7Q8WUX9 453 aaPredicted RBP19.15■□□□□ 0.66
PUM1-215ENST00000525948 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
PUM1-215ENST00000525948 ABCA5Q8WWZ7 1642 aa19.06■□□□□ 0.64
PUM1-215ENST00000525948 ERCC6L2Q5T890 1561 aa19.05■□□□□ 0.64
PUM1-215ENST00000525948 ABCA10Q8WWZ4 1543 aa18.97■□□□□ 0.63
PUM1-215ENST00000525948 CEP170Q5SW79 1584 aa18.96■□□□□ 0.63
PUM1-215ENST00000525948 KIF13AQ9H1H9 1805 aa18.95■□□□□ 0.62
PUM1-215ENST00000525948 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
PUM1-215ENST00000525948 GRIN2AQ12879 1464 aa18.95■□□□□ 0.62
PUM1-215ENST00000525948 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms