RNA–Protein interactions for RNA: ENST00000525939.1

ABCA7-208, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 3

Gene ABCA7, Length 374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-208ENST00000525939 NISCHQ9Y2I1 1504 aa54.34■■■■■ 6.29
ABCA7-208ENST00000525939 CCDC180Q9P1Z9 1646 aa48.44■■■■■ 5.35
ABCA7-208ENST00000525939 ABCC9O60706 1549 aa47.27■■■■■ 5.16
ABCA7-208ENST00000525939 RB1CC1Q8TDY2 1594 aa45.57■■■■■ 4.89
ABCA7-208ENST00000525939 NACADO15069 1562 aa45.53■■■■■ 4.88
ABCA7-208ENST00000525939 MYO15BQ96JP2 1530 aa45.31■■■■■ 4.84
ABCA7-208ENST00000525939 ZCCHC6Q5VYS8 1495 aaKnown RBP45.26■■■■■ 4.84
ABCA7-208ENST00000525939 DCAF8L2P0C7V8 631 aa45.18■■■■■ 4.82
ABCA7-208ENST00000525939 DCAF1Q9Y4B6 1507 aa45.06■■■■■ 4.8
ABCA7-208ENST00000525939 UNC13AQ9UPW8 1703 aa44.6■■■■■ 4.73
ABCA7-208ENST00000525939 BICRAQ9NZM4 1560 aa44.2■■■■■ 4.67
ABCA7-208ENST00000525939 PABPN1Q86U42 306 aaKnown RBP eCLIP44.09■■■■■ 4.651e-6■■■□□ 18.8
ABCA7-208ENST00000525939 SCRIBQ14160 1630 aa44.02■■■■■ 4.64
ABCA7-208ENST00000525939 SHROOM4Q9ULL8 1493 aa43.83■■■■■ 4.61
ABCA7-208ENST00000525939 DNAJC5BQ9UF47 199 aa43.47■■■■■ 4.55
ABCA7-208ENST00000525939 EIF4G1Q04637 1599 aaKnown RBP43.02■■■■■ 4.48
ABCA7-208ENST00000525939 CC2D2AQ9P2K1 1620 aa42.86■■■■■ 4.45
ABCA7-208ENST00000525939 CECR2Q9BXF3 1484 aa42.53■■■■■ 4.4
ABCA7-208ENST00000525939 SMARCA4P51532 1647 aa42.19■■■■■ 4.34
ABCA7-208ENST00000525939 BAZ1AQ9NRL2 1556 aaPredicted RBP42.14■■■■■ 4.34
ABCA7-208ENST00000525939 NCAPD3P42695 1498 aa41.99■■■■■ 4.31
ABCA7-208ENST00000525939 ATAD2BQ9ULI0 1458 aa41.96■■■■■ 4.31
ABCA7-208ENST00000525939 SMARCA2P51531 1590 aa41.94■■■■■ 4.3
ABCA7-208ENST00000525939 PEG3Q9GZU2 1588 aa41.86■■■■■ 4.29
ABCA7-208ENST00000525939 MROH2BQ7Z745 1585 aa41.83■■■■■ 4.29
ABCA7-208ENST00000525939 HMGXB3Q12766 1538 aa41.79■■■■■ 4.28
ABCA7-208ENST00000525939 BAZ1BQ9UIG0 1483 aaKnown RBP41.58■■■■■ 4.25
ABCA7-208ENST00000525939 WIZO95785 1651 aa41.39■■■■■ 4.22
ABCA7-208ENST00000525939 RSF1Q96T23 1441 aaPredicted RBP41.33■■■■■ 4.21
ABCA7-208ENST00000525939 TOP2AP11388 1531 aaKnown RBP40.97■■■■■ 4.15
ABCA7-208ENST00000525939 LAMC3Q9Y6N6 1575 aa40.91■■■■■ 4.14
ABCA7-208ENST00000525939 NESP48681 1621 aa40.9■■■■■ 4.14
ABCA7-208ENST00000525939 ERCC6Q03468 1493 aa40.76■■■■■ 4.12
ABCA7-208ENST00000525939 CADPSQ9ULU8 1353 aa40.72■■■■■ 4.11
ABCA7-208ENST00000525939 PDS5BQ9NTI5 1447 aa40.58■■■■■ 4.09
ABCA7-208ENST00000525939 KIF21AQ7Z4S6 1674 aa40.5■■■■■ 4.07
ABCA7-208ENST00000525939 CFTRP13569 1480 aa40.49■■■■■ 4.07
ABCA7-208ENST00000525939 CUX2O14529 1486 aa40.47■■■■■ 4.07
ABCA7-208ENST00000525939 CCDC88BA6NC98 1476 aa40.45■■■■■ 4.07
ABCA7-208ENST00000525939 THOC2Q8NI27 1593 aaKnown RBP40.4■■■■■ 4.06
ABCA7-208ENST00000525939 PRDM2Q13029 1718 aa40.28■■■■■ 4.04
ABCA7-208ENST00000525939 FANCD2Q9BXW9 1451 aa40.23■■■■■ 4.03
ABCA7-208ENST00000525939 CEP164Q9UPV0 1460 aa40.19■■■■■ 4.02
ABCA7-208ENST00000525939 MRC2Q9UBG0 1479 aa40.16■■■■■ 4.02
ABCA7-208ENST00000525939 WDR62O43379 1518 aa40.08■■■■■ 4.01
ABCA7-208ENST00000525939 SUPT5HO00267 1087 aaKnown RBP40.03■■■■■ 4
ABCA7-208ENST00000525939 URB2Q14146 1524 aaKnown RBP39.84■■■■□ 3.97
ABCA7-208ENST00000525939 ABCC8Q09428 1581 aa39.65■■■■□ 3.94
ABCA7-208ENST00000525939 TOPBP1Q92547 1522 aa39.6■■■■□ 3.93
ABCA7-208ENST00000525939 DNMBPQ6XZF7 1577 aa39.57■■■■□ 3.92
ABCA7-208ENST00000525939 IFT140Q96RY7 1462 aa39.37■■■■□ 3.89
ABCA7-208ENST00000525939 DNAJC5Q9H3Z4 198 aa39.28■■■■□ 3.88
ABCA7-208ENST00000525939 CUX1P39880 1505 aa39.25■■■■□ 3.87
ABCA7-208ENST00000525939 POLA1P09884 1462 aaPredicted RBP39.24■■■■□ 3.87
ABCA7-208ENST00000525939 TARBP1Q13395 1621 aaKnown RBP39.22■■■■□ 3.87
ABCA7-208ENST00000525939 ZNF608Q9ULD9 1512 aaPredicted RBP39.15■■■■□ 3.86
ABCA7-208ENST00000525939 FGD5Q6ZNL6 1462 aa39.11■■■■□ 3.85
ABCA7-208ENST00000525939 SOGA1O94964 1423 aa39.06■■■■□ 3.84
ABCA7-208ENST00000525939 EIF4G3O43432 1585 aaKnown RBP39.05■■■■□ 3.84
ABCA7-208ENST00000525939 RAD54L2Q9Y4B4 1467 aa39.02■■■■□ 3.84
ABCA7-208ENST00000525939 WDR97A6NE52 1622 aa38.98■■■■□ 3.83
ABCA7-208ENST00000525939 BIVM-ERCC5R4GMW8 1640 aa38.97■■■■□ 3.83
ABCA7-208ENST00000525939 TOP2BQ02880 1626 aa38.95■■■■□ 3.83
ABCA7-208ENST00000525939 WRNQ14191 1432 aaPredicted RBP eCLIP38.95■■■■□ 3.83
ABCA7-208ENST00000525939 AQRO60306 1485 aaKnown RBP eCLIP38.9■■■■□ 3.822e-6■■■□□ 15.2
ABCA7-208ENST00000525939 SYNJ1O43426 1573 aa38.87■■■■□ 3.81
ABCA7-208ENST00000525939 TDRD9Q8NDG6 1382 aaKnown RBP38.8■■■■□ 3.8
ABCA7-208ENST00000525939 ABCA10Q8WWZ4 1543 aa38.79■■■■□ 3.8
ABCA7-208ENST00000525939 OSCARQ8IYS5 282 aa38.7■■■■□ 3.79
ABCA7-208ENST00000525939 ABCA5Q8WWZ7 1642 aa38.67■■■■□ 3.78
ABCA7-208ENST00000525939 GRIN2BQ13224 1484 aa38.64■■■■□ 3.78
ABCA7-208ENST00000525939 GAPVD1Q14C86 1478 aa38.62■■■■□ 3.77
ABCA7-208ENST00000525939 PBRM1Q86U86 1689 aa38.61■■■■□ 3.77
ABCA7-208ENST00000525939 CHD1O14646 1710 aa38.59■■■■□ 3.77
ABCA7-208ENST00000525939 MAGI1Q96QZ7 1491 aaPredicted RBP38.58■■■■□ 3.77
ABCA7-208ENST00000525939 SNAPC4Q5SXM2 1469 aa38.56■■■■□ 3.76
ABCA7-208ENST00000525939 SYNJ2O15056 1496 aa38.41■■■■□ 3.74
ABCA7-208ENST00000525939 ERICH3Q5RHP9 1530 aa38.35■■■■□ 3.73
ABCA7-208ENST00000525939 FBLN2P98095 1184 aa38.35■■■■□ 3.73
ABCA7-208ENST00000525939 CHMP7Q8WUX9 453 aaPredicted RBP38.31■■■■□ 3.72
ABCA7-208ENST00000525939 ADAMTS12P58397 1594 aa38.27■■■■□ 3.72
ABCA7-208ENST00000525939 FHAD1B1AJZ9 1412 aa38.19■■■■□ 3.7
ABCA7-208ENST00000525939 CLASP1Q7Z460 1538 aa38.18■■■■□ 3.7
ABCA7-208ENST00000525939 KIF27Q86VH2 1401 aa38.15■■■■□ 3.7
ABCA7-208ENST00000525939 GRIN2AQ12879 1464 aa38.15■■■■□ 3.7
ABCA7-208ENST00000525939 RIMBP3CA6NJZ7 1639 aa38.14■■■■□ 3.7
ABCA7-208ENST00000525939 RIMBP3BA6NNM3 1639 aa38.14■■■■□ 3.7
ABCA7-208ENST00000525939 RIMBP3Q9UFD9 1639 aa38.14■■■■□ 3.7
ABCA7-208ENST00000525939 ARHGEF11O15085 1522 aa38.11■■■■□ 3.69
ABCA7-208ENST00000525939 IGF1RP08069 1367 aa38.02■■■■□ 3.68
ABCA7-208ENST00000525939 NUP160Q12769 1436 aa38.01■■■■□ 3.68
ABCA7-208ENST00000525939 CUL7Q14999 1698 aa37.99■■■■□ 3.67
ABCA7-208ENST00000525939 CEP170Q5SW79 1584 aa37.96■■■■□ 3.67
ABCA7-208ENST00000525939 TRIM41Q8WV44 630 aa37.88■■■■□ 3.65
ABCA7-208ENST00000525939 ARAP1Q96P48 1450 aa37.78■■■■□ 3.64
ABCA7-208ENST00000525939 SHROOM2Q13796 1616 aa37.78■■■■□ 3.64
ABCA7-208ENST00000525939 CARMIL1Q5VZK9 1371 aa37.77■■■■□ 3.64
ABCA7-208ENST00000525939 RUSC2Q8N2Y8 1516 aa37.73■■■■□ 3.63
ABCA7-208ENST00000525939 CYB5RLQ6IPT4 315 aa37.65■■■■□ 3.62
ABCA7-208ENST00000525939 KIAA0586Q9BVV6 1533 aa37.61■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms