RNA–Protein interactions for RNA: ENST00000525592.1

TM9SF1-204, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-204ENST00000525592 NISCHQ9Y2I1 1504 aa49.52■■■■■ 5.52
TM9SF1-204ENST00000525592 CCDC180Q9P1Z9 1646 aa44.3■■■■■ 4.68
TM9SF1-204ENST00000525592 ABCC9O60706 1549 aa43.67■■■■■ 4.58
TM9SF1-204ENST00000525592 RB1CC1Q8TDY2 1594 aa41.88■■■■■ 4.3
TM9SF1-204ENST00000525592 NACADO15069 1562 aa41.74■■■■■ 4.27
TM9SF1-204ENST00000525592 DCAF8L2P0C7V8 631 aa41.42■■■■■ 4.22
TM9SF1-204ENST00000525592 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
TM9SF1-204ENST00000525592 ZCCHC6Q5VYS8 1495 aaKnown RBP41.17■■■■■ 4.18
TM9SF1-204ENST00000525592 DCAF1Q9Y4B6 1507 aa41.01■■■■■ 4.16
TM9SF1-204ENST00000525592 UNC13AQ9UPW8 1703 aa40.9■■■■■ 4.14
TM9SF1-204ENST00000525592 PABPN1Q86U42 306 aaKnown RBP eCLIP40.67■■■■■ 4.1
TM9SF1-204ENST00000525592 BICRAQ9NZM4 1560 aa40.6■■■■■ 4.09
TM9SF1-204ENST00000525592 DNAJC5BQ9UF47 199 aa40.44■■■■■ 4.06
TM9SF1-204ENST00000525592 SCRIBQ14160 1630 aa40.29■■■■■ 4.04
TM9SF1-204ENST00000525592 SHROOM4Q9ULL8 1493 aa40.26■■■■■ 4.03
TM9SF1-204ENST00000525592 EIF4G1Q04637 1599 aaKnown RBP39.59■■■■□ 3.93
TM9SF1-204ENST00000525592 CC2D2AQ9P2K1 1620 aa39.52■■■■□ 3.92
TM9SF1-204ENST00000525592 CECR2Q9BXF3 1484 aa39.32■■■■□ 3.89
TM9SF1-204ENST00000525592 SMARCA4P51532 1647 aa38.53■■■■□ 3.76
TM9SF1-204ENST00000525592 NCAPD3P42695 1498 aa38.49■■■■□ 3.75
TM9SF1-204ENST00000525592 BAZ1AQ9NRL2 1556 aaPredicted RBP38.44■■■■□ 3.74
TM9SF1-204ENST00000525592 ATAD2BQ9ULI0 1458 aa38.42■■■■□ 3.74
TM9SF1-204ENST00000525592 SMARCA2P51531 1590 aa38.4■■■■□ 3.74
TM9SF1-204ENST00000525592 HMGXB3Q12766 1538 aa38.3■■■■□ 3.72
TM9SF1-204ENST00000525592 PEG3Q9GZU2 1588 aa38.21■■■■□ 3.71
TM9SF1-204ENST00000525592 MROH2BQ7Z745 1585 aa38.12■■■■□ 3.69
TM9SF1-204ENST00000525592 BAZ1BQ9UIG0 1483 aaKnown RBP38.09■■■■□ 3.69
TM9SF1-204ENST00000525592 ERCC6Q03468 1493 aa37.71■■■■□ 3.63
TM9SF1-204ENST00000525592 WIZO95785 1651 aa37.69■■■■□ 3.62
TM9SF1-204ENST00000525592 NESP48681 1621 aa37.65■■■■□ 3.62
TM9SF1-204ENST00000525592 LAMC3Q9Y6N6 1575 aa37.58■■■■□ 3.61
TM9SF1-204ENST00000525592 CUX2O14529 1486 aa37.53■■■■□ 3.6
TM9SF1-204ENST00000525592 RSF1Q96T23 1441 aaPredicted RBP37.52■■■■□ 3.6
TM9SF1-204ENST00000525592 CADPSQ9ULU8 1353 aa37.32■■■■□ 3.57
TM9SF1-204ENST00000525592 PDS5BQ9NTI5 1447 aa37.32■■■■□ 3.56
TM9SF1-204ENST00000525592 TOP2AP11388 1531 aaKnown RBP37.31■■■■□ 3.56
TM9SF1-204ENST00000525592 THOC2Q8NI27 1593 aaKnown RBP37.25■■■■□ 3.55
TM9SF1-204ENST00000525592 KIF21AQ7Z4S6 1674 aa37.23■■■■□ 3.55
TM9SF1-204ENST00000525592 CFTRP13569 1480 aa37.03■■■■□ 3.52
TM9SF1-204ENST00000525592 MRC2Q9UBG0 1479 aa36.96■■■■□ 3.51
TM9SF1-204ENST00000525592 CEP164Q9UPV0 1460 aa36.91■■■■□ 3.5
TM9SF1-204ENST00000525592 FANCD2Q9BXW9 1451 aa36.89■■■■□ 3.5
TM9SF1-204ENST00000525592 WDR62O43379 1518 aa36.88■■■■□ 3.49
TM9SF1-204ENST00000525592 DNAJC5Q9H3Z4 198 aa36.85■■■■□ 3.49
TM9SF1-204ENST00000525592 CCDC88BA6NC98 1476 aa36.82■■■■□ 3.49
TM9SF1-204ENST00000525592 PRDM2Q13029 1718 aa36.76■■■■□ 3.47
TM9SF1-204ENST00000525592 URB2Q14146 1524 aaKnown RBP36.54■■■■□ 3.44
TM9SF1-204ENST00000525592 ABCC8Q09428 1581 aa36.27■■■■□ 3.4
TM9SF1-204ENST00000525592 TOPBP1Q92547 1522 aa36.26■■■■□ 3.4
TM9SF1-204ENST00000525592 DNMBPQ6XZF7 1577 aa36.2■■■■□ 3.39
TM9SF1-204ENST00000525592 IFT140Q96RY7 1462 aa36.17■■■■□ 3.38
TM9SF1-204ENST00000525592 SUPT5HO00267 1087 aaKnown RBP36.13■■■■□ 3.37
TM9SF1-204ENST00000525592 ZNF608Q9ULD9 1512 aaPredicted RBP35.98■■■■□ 3.35
TM9SF1-204ENST00000525592 POLA1P09884 1462 aaPredicted RBP35.92■■■■□ 3.34
TM9SF1-204ENST00000525592 TARBP1Q13395 1621 aaKnown RBP35.91■■■■□ 3.34
TM9SF1-204ENST00000525592 EIF4G3O43432 1585 aaKnown RBP35.88■■■■□ 3.33
TM9SF1-204ENST00000525592 OSCARQ8IYS5 282 aa35.82■■■■□ 3.32
TM9SF1-204ENST00000525592 CUX1P39880 1505 aa35.8■■■■□ 3.32
TM9SF1-204ENST00000525592 FGD5Q6ZNL6 1462 aa35.76■■■■□ 3.32
TM9SF1-204ENST00000525592 SOGA1O94964 1423 aa35.74■■■■□ 3.31
TM9SF1-204ENST00000525592 RAD54L2Q9Y4B4 1467 aa35.73■■■■□ 3.31
TM9SF1-204ENST00000525592 AQRO60306 1485 aaKnown RBP eCLIP35.72■■■■□ 3.31
TM9SF1-204ENST00000525592 WDR97A6NE52 1622 aa35.68■■■■□ 3.3
TM9SF1-204ENST00000525592 TDRD9Q8NDG6 1382 aaKnown RBP35.57■■■■□ 3.28
TM9SF1-204ENST00000525592 CHD1O14646 1710 aa35.5■■■■□ 3.27
TM9SF1-204ENST00000525592 ABCA10Q8WWZ4 1543 aa35.42■■■■□ 3.26
TM9SF1-204ENST00000525592 GRIN2BQ13224 1484 aa35.41■■■■□ 3.26
TM9SF1-204ENST00000525592 SNAPC4Q5SXM2 1469 aa35.41■■■■□ 3.26
TM9SF1-204ENST00000525592 TOP2BQ02880 1626 aa35.41■■■■□ 3.26
TM9SF1-204ENST00000525592 BIVM-ERCC5R4GMW8 1640 aa35.41■■■■□ 3.26
TM9SF1-204ENST00000525592 WRNQ14191 1432 aaPredicted RBP eCLIP35.4■■■■□ 3.26
TM9SF1-204ENST00000525592 MAGI1Q96QZ7 1491 aaPredicted RBP35.4■■■■□ 3.26
TM9SF1-204ENST00000525592 TRIM41Q8WV44 630 aa35.37■■■■□ 3.25
TM9SF1-204ENST00000525592 FBLN2P98095 1184 aa35.35■■■■□ 3.25
TM9SF1-204ENST00000525592 GAPVD1Q14C86 1478 aa35.35■■■■□ 3.25
TM9SF1-204ENST00000525592 SYNJ1O43426 1573 aa35.34■■■■□ 3.25
TM9SF1-204ENST00000525592 ABCA5Q8WWZ7 1642 aa35.33■■■■□ 3.25
TM9SF1-204ENST00000525592 RIMBP3CA6NJZ7 1639 aa35.32■■■■□ 3.25
TM9SF1-204ENST00000525592 RIMBP3BA6NNM3 1639 aa35.32■■■■□ 3.25
TM9SF1-204ENST00000525592 RIMBP3Q9UFD9 1639 aa35.32■■■■□ 3.25
TM9SF1-204ENST00000525592 PBRM1Q86U86 1689 aa35.32■■■■□ 3.24
TM9SF1-204ENST00000525592 ARHGEF11O15085 1522 aa35.27■■■■□ 3.24
TM9SF1-204ENST00000525592 SYNJ2O15056 1496 aa35.25■■■■□ 3.23
TM9SF1-204ENST00000525592 CHMP7Q8WUX9 453 aaPredicted RBP35.22■■■■□ 3.23
TM9SF1-204ENST00000525592 CLASP1Q7Z460 1538 aa35.13■■■■□ 3.21
TM9SF1-204ENST00000525592 ADAMTS12P58397 1594 aa35.02■■■■□ 3.2
TM9SF1-204ENST00000525592 ERICH3Q5RHP9 1530 aa35.01■■■■□ 3.19
TM9SF1-204ENST00000525592 GRIN2AQ12879 1464 aa34.96■■■■□ 3.19
TM9SF1-204ENST00000525592 ARAP1Q96P48 1450 aa34.95■■■■□ 3.19
TM9SF1-204ENST00000525592 FHAD1B1AJZ9 1412 aa34.93■■■■□ 3.18
TM9SF1-204ENST00000525592 CYB5RLQ6IPT4 315 aa34.9■■■■□ 3.18
TM9SF1-204ENST00000525592 NUP160Q12769 1436 aa34.83■■■■□ 3.17
TM9SF1-204ENST00000525592 CEP170Q5SW79 1584 aa34.79■■■■□ 3.16
TM9SF1-204ENST00000525592 KIF27Q86VH2 1401 aa34.72■■■■□ 3.15
TM9SF1-204ENST00000525592 SHROOM2Q13796 1616 aa34.64■■■■□ 3.14
TM9SF1-204ENST00000525592 CUL7Q14999 1698 aa34.61■■■■□ 3.13
TM9SF1-204ENST00000525592 IGF1RP08069 1367 aa34.6■■■■□ 3.13
TM9SF1-204ENST00000525592 ERCC6L2Q5T890 1561 aa34.54■■■■□ 3.12
TM9SF1-204ENST00000525592 RUSC2Q8N2Y8 1516 aa34.52■■■■□ 3.12
TM9SF1-204ENST00000525592 PRG4Q92954 1404 aaPredicted RBP34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms