RNA–Protein interactions for RNA: ENST00000525576.1

NXF1-202, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-202ENST00000525576 NISCHQ9Y2I1 1504 aa27.57■■■□□ 2
NXF1-202ENST00000525576 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
NXF1-202ENST00000525576 ABCC9O60706 1549 aa23.86■■□□□ 1.41
NXF1-202ENST00000525576 NACADO15069 1562 aa23.06■■□□□ 1.28
NXF1-202ENST00000525576 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
NXF1-202ENST00000525576 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
NXF1-202ENST00000525576 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
NXF1-202ENST00000525576 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
NXF1-202ENST00000525576 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
NXF1-202ENST00000525576 DNAJC5BQ9UF47 199 aa22.5■■□□□ 1.19
NXF1-202ENST00000525576 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
NXF1-202ENST00000525576 BICRAQ9NZM4 1560 aa22.3■■□□□ 1.16
NXF1-202ENST00000525576 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
NXF1-202ENST00000525576 SCRIBQ14160 1630 aa22.29■■□□□ 1.16
NXF1-202ENST00000525576 SHROOM4Q9ULL8 1493 aa22.17■■□□□ 1.14
NXF1-202ENST00000525576 EIF4G1Q04637 1599 aaKnown RBP21.72■■□□□ 1.07
NXF1-202ENST00000525576 CC2D2AQ9P2K1 1620 aa21.62■■□□□ 1.05
NXF1-202ENST00000525576 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
NXF1-202ENST00000525576 BAZ1AQ9NRL2 1556 aaPredicted RBP21.39■■□□□ 1.01
NXF1-202ENST00000525576 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
NXF1-202ENST00000525576 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
NXF1-202ENST00000525576 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
NXF1-202ENST00000525576 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
NXF1-202ENST00000525576 MROH2BQ7Z745 1585 aa21.22■□□□□ 0.99
NXF1-202ENST00000525576 PEG3Q9GZU2 1588 aa21.2■□□□□ 0.98
NXF1-202ENST00000525576 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
NXF1-202ENST00000525576 BAZ1BQ9UIG0 1483 aaKnown RBP21.08■□□□□ 0.97
NXF1-202ENST00000525576 RSF1Q96T23 1441 aaPredicted RBP21.02■□□□□ 0.96
NXF1-202ENST00000525576 WIZO95785 1651 aa20.99■□□□□ 0.95
NXF1-202ENST00000525576 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
NXF1-202ENST00000525576 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
NXF1-202ENST00000525576 LAMC3Q9Y6N6 1575 aa20.69■□□□□ 0.9
NXF1-202ENST00000525576 NESP48681 1621 aa20.65■□□□□ 0.9
NXF1-202ENST00000525576 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
NXF1-202ENST00000525576 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
NXF1-202ENST00000525576 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
NXF1-202ENST00000525576 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
NXF1-202ENST00000525576 CFTRP13569 1480 aa20.52■□□□□ 0.88
NXF1-202ENST00000525576 CUX2O14529 1486 aa20.5■□□□□ 0.87
NXF1-202ENST00000525576 SUPT5HO00267 1087 aaKnown RBP20.49■□□□□ 0.87
NXF1-202ENST00000525576 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
NXF1-202ENST00000525576 PRDM2Q13029 1718 aa20.38■□□□□ 0.85
NXF1-202ENST00000525576 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
NXF1-202ENST00000525576 THOC2Q8NI27 1593 aaKnown RBP20.35■□□□□ 0.85
NXF1-202ENST00000525576 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
NXF1-202ENST00000525576 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
NXF1-202ENST00000525576 WDR62O43379 1518 aa20.24■□□□□ 0.83
NXF1-202ENST00000525576 URB2Q14146 1524 aaKnown RBP20.15■□□□□ 0.82
NXF1-202ENST00000525576 ABCC8Q09428 1581 aa20.13■□□□□ 0.81
NXF1-202ENST00000525576 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
NXF1-202ENST00000525576 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
NXF1-202ENST00000525576 IFT140Q96RY7 1462 aa19.94■□□□□ 0.78
NXF1-202ENST00000525576 CUX1P39880 1505 aa19.9■□□□□ 0.78
NXF1-202ENST00000525576 POLA1P09884 1462 aaPredicted RBP19.88■□□□□ 0.77
NXF1-202ENST00000525576 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
NXF1-202ENST00000525576 SOGA1O94964 1423 aa19.83■□□□□ 0.76
NXF1-202ENST00000525576 WRNQ14191 1432 aaPredicted RBP eCLIP19.83■□□□□ 0.76
NXF1-202ENST00000525576 TARBP1Q13395 1621 aaKnown RBP19.83■□□□□ 0.76
NXF1-202ENST00000525576 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
NXF1-202ENST00000525576 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
NXF1-202ENST00000525576 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
NXF1-202ENST00000525576 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
NXF1-202ENST00000525576 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
NXF1-202ENST00000525576 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
NXF1-202ENST00000525576 EIF4G3O43432 1585 aaKnown RBP19.72■□□□□ 0.75
NXF1-202ENST00000525576 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.745e-7■■■■■ 28.2
NXF1-202ENST00000525576 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
NXF1-202ENST00000525576 ABCA10Q8WWZ4 1543 aa19.67■□□□□ 0.74
NXF1-202ENST00000525576 TRIM41Q8WV44 630 aa19.67■□□□□ 0.74
NXF1-202ENST00000525576 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
NXF1-202ENST00000525576 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
NXF1-202ENST00000525576 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
NXF1-202ENST00000525576 ABCA5Q8WWZ7 1642 aa19.57■□□□□ 0.72
NXF1-202ENST00000525576 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
NXF1-202ENST00000525576 PBRM1Q86U86 1689 aa19.52■□□□□ 0.72
NXF1-202ENST00000525576 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
NXF1-202ENST00000525576 CHD1O14646 1710 aa19.47■□□□□ 0.71
NXF1-202ENST00000525576 FBLN2P98095 1184 aa19.46■□□□□ 0.71
NXF1-202ENST00000525576 SYNJ2O15056 1496 aa19.46■□□□□ 0.71
NXF1-202ENST00000525576 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
NXF1-202ENST00000525576 CHMP7Q8WUX9 453 aaPredicted RBP19.45■□□□□ 0.7
NXF1-202ENST00000525576 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
NXF1-202ENST00000525576 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
NXF1-202ENST00000525576 RIMBP3CA6NJZ7 1639 aa19.37■□□□□ 0.69
NXF1-202ENST00000525576 RIMBP3BA6NNM3 1639 aa19.37■□□□□ 0.69
NXF1-202ENST00000525576 RIMBP3Q9UFD9 1639 aa19.37■□□□□ 0.69
NXF1-202ENST00000525576 ADAMTS12P58397 1594 aa19.37■□□□□ 0.69
NXF1-202ENST00000525576 IGF1RP08069 1367 aa19.32■□□□□ 0.68
NXF1-202ENST00000525576 GRIN2AQ12879 1464 aa19.32■□□□□ 0.68
NXF1-202ENST00000525576 CUL7Q14999 1698 aa19.29■□□□□ 0.68
NXF1-202ENST00000525576 CLASP1Q7Z460 1538 aa19.27■□□□□ 0.68
NXF1-202ENST00000525576 NUP160Q12769 1436 aa19.25■□□□□ 0.67
NXF1-202ENST00000525576 CARMIL1Q5VZK9 1371 aa19.21■□□□□ 0.67
NXF1-202ENST00000525576 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
NXF1-202ENST00000525576 CEP170Q5SW79 1584 aa19.2■□□□□ 0.66
NXF1-202ENST00000525576 RUSC2Q8N2Y8 1516 aa19.19■□□□□ 0.66
NXF1-202ENST00000525576 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
NXF1-202ENST00000525576 EEA1Q15075 1411 aa19.12■□□□□ 0.65
NXF1-202ENST00000525576 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
NXF1-202ENST00000525576 SHROOM2Q13796 1616 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms