RNA–Protein interactions for RNA: ENST00000525238.2

ABCA7-207, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 1 (best)

Gene ABCA7, Length 1,100 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-207ENST00000525238 NISCHQ9Y2I1 1504 aa47.95■■■■■ 5.27
ABCA7-207ENST00000525238 CCDC180Q9P1Z9 1646 aa42.97■■■■■ 4.47
ABCA7-207ENST00000525238 ABCC9O60706 1549 aa42.76■■■■■ 4.44
ABCA7-207ENST00000525238 RB1CC1Q8TDY2 1594 aa40.79■■■■■ 4.12
ABCA7-207ENST00000525238 DCAF8L2P0C7V8 631 aa40.53■■■■■ 4.08
ABCA7-207ENST00000525238 NACADO15069 1562 aa40.52■■■■■ 4.08
ABCA7-207ENST00000525238 MYO15BQ96JP2 1530 aa39.96■■■■□ 3.99
ABCA7-207ENST00000525238 UNC13AQ9UPW8 1703 aa39.9■■■■□ 3.98
ABCA7-207ENST00000525238 PABPN1Q86U42 306 aaKnown RBP eCLIP39.84■■■■□ 3.97
ABCA7-207ENST00000525238 ZCCHC6Q5VYS8 1495 aaKnown RBP39.8■■■■□ 3.96
ABCA7-207ENST00000525238 DNAJC5BQ9UF47 199 aa39.75■■■■□ 3.95
ABCA7-207ENST00000525238 DCAF1Q9Y4B6 1507 aa39.56■■■■□ 3.92
ABCA7-207ENST00000525238 BICRAQ9NZM4 1560 aa39.52■■■■□ 3.92
ABCA7-207ENST00000525238 SCRIBQ14160 1630 aa39.25■■■■□ 3.87
ABCA7-207ENST00000525238 SHROOM4Q9ULL8 1493 aa39■■■■□ 3.83
ABCA7-207ENST00000525238 CC2D2AQ9P2K1 1620 aa38.62■■■■□ 3.77
ABCA7-207ENST00000525238 EIF4G1Q04637 1599 aaKnown RBP38.58■■■■□ 3.77
ABCA7-207ENST00000525238 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
ABCA7-207ENST00000525238 SMARCA4P51532 1647 aa37.4■■■■□ 3.58
ABCA7-207ENST00000525238 NCAPD3P42695 1498 aa37.35■■■■□ 3.57
ABCA7-207ENST00000525238 ATAD2BQ9ULI0 1458 aa37.32■■■■□ 3.56
ABCA7-207ENST00000525238 SMARCA2P51531 1590 aa37.28■■■■□ 3.56
ABCA7-207ENST00000525238 BAZ1AQ9NRL2 1556 aaPredicted RBP37.25■■■■□ 3.55
ABCA7-207ENST00000525238 HMGXB3Q12766 1538 aa37.16■■■■□ 3.54
ABCA7-207ENST00000525238 BAZ1BQ9UIG0 1483 aaKnown RBP37.05■■■■□ 3.52
ABCA7-207ENST00000525238 MROH2BQ7Z745 1585 aa36.97■■■■□ 3.51
ABCA7-207ENST00000525238 ERCC6Q03468 1493 aa36.96■■■■□ 3.51
ABCA7-207ENST00000525238 PEG3Q9GZU2 1588 aa36.95■■■■□ 3.51
ABCA7-207ENST00000525238 NESP48681 1621 aa36.78■■■■□ 3.48
ABCA7-207ENST00000525238 CUX2O14529 1486 aa36.69■■■■□ 3.46
ABCA7-207ENST00000525238 WIZO95785 1651 aa36.6■■■■□ 3.45
ABCA7-207ENST00000525238 LAMC3Q9Y6N6 1575 aa36.56■■■■□ 3.44
ABCA7-207ENST00000525238 KIF21AQ7Z4S6 1674 aa36.38■■■■□ 3.41
ABCA7-207ENST00000525238 THOC2Q8NI27 1593 aaKnown RBP36.36■■■■□ 3.41
ABCA7-207ENST00000525238 PDS5BQ9NTI5 1447 aa36.34■■■■□ 3.41
ABCA7-207ENST00000525238 DNAJC5Q9H3Z4 198 aa36.33■■■■□ 3.41
ABCA7-207ENST00000525238 CADPSQ9ULU8 1353 aa36.27■■■■□ 3.4
ABCA7-207ENST00000525238 RSF1Q96T23 1441 aaPredicted RBP36.26■■■■□ 3.4
ABCA7-207ENST00000525238 TOP2AP11388 1531 aaKnown RBP36.12■■■■□ 3.37
ABCA7-207ENST00000525238 MRC2Q9UBG0 1479 aa36.02■■■■□ 3.36
ABCA7-207ENST00000525238 CEP164Q9UPV0 1460 aa35.95■■■■□ 3.35
ABCA7-207ENST00000525238 FANCD2Q9BXW9 1451 aa35.91■■■■□ 3.34
ABCA7-207ENST00000525238 CFTRP13569 1480 aa35.9■■■■□ 3.34
ABCA7-207ENST00000525238 WDR62O43379 1518 aa35.89■■■■□ 3.34
ABCA7-207ENST00000525238 PRDM2Q13029 1718 aa35.69■■■■□ 3.3
ABCA7-207ENST00000525238 CCDC88BA6NC98 1476 aa35.68■■■■□ 3.3
ABCA7-207ENST00000525238 URB2Q14146 1524 aaKnown RBP35.57■■■■□ 3.29
ABCA7-207ENST00000525238 TOPBP1Q92547 1522 aa35.25■■■■□ 3.23
ABCA7-207ENST00000525238 IFT140Q96RY7 1462 aa35.19■■■■□ 3.22
ABCA7-207ENST00000525238 ABCC8Q09428 1581 aa35.17■■■■□ 3.22
ABCA7-207ENST00000525238 DNMBPQ6XZF7 1577 aa35.16■■■■□ 3.22
ABCA7-207ENST00000525238 ZNF608Q9ULD9 1512 aaPredicted RBP35.11■■■■□ 3.21
ABCA7-207ENST00000525238 OSCARQ8IYS5 282 aa35.07■■■■□ 3.2
ABCA7-207ENST00000525238 TRIM41Q8WV44 630 aa35.02■■■■□ 3.2
ABCA7-207ENST00000525238 SUPT5HO00267 1087 aaKnown RBP34.99■■■■□ 3.19
ABCA7-207ENST00000525238 EIF4G3O43432 1585 aaKnown RBP34.98■■■■□ 3.19
ABCA7-207ENST00000525238 POLA1P09884 1462 aaPredicted RBP34.9■■■■□ 3.18
ABCA7-207ENST00000525238 TARBP1Q13395 1621 aaKnown RBP34.89■■■■□ 3.18
ABCA7-207ENST00000525238 AQRO60306 1485 aaKnown RBP eCLIP34.83■■■■□ 3.172e-17■■□□□ 14.5
ABCA7-207ENST00000525238 RAD54L2Q9Y4B4 1467 aa34.79■■■■□ 3.16
ABCA7-207ENST00000525238 SOGA1O94964 1423 aa34.75■■■■□ 3.15
ABCA7-207ENST00000525238 FGD5Q6ZNL6 1462 aa34.75■■■■□ 3.15
ABCA7-207ENST00000525238 CUX1P39880 1505 aa34.72■■■■□ 3.15
ABCA7-207ENST00000525238 CHD1O14646 1710 aa34.7■■■■□ 3.15
ABCA7-207ENST00000525238 TDRD9Q8NDG6 1382 aaKnown RBP34.66■■■■□ 3.14
ABCA7-207ENST00000525238 FBLN2P98095 1184 aa34.65■■■■□ 3.14
ABCA7-207ENST00000525238 RIMBP3CA6NJZ7 1639 aa34.64■■■■□ 3.14
ABCA7-207ENST00000525238 RIMBP3BA6NNM3 1639 aa34.64■■■■□ 3.14
ABCA7-207ENST00000525238 RIMBP3Q9UFD9 1639 aa34.64■■■■□ 3.14
ABCA7-207ENST00000525238 WDR97A6NE52 1622 aa34.56■■■■□ 3.12
ABCA7-207ENST00000525238 ARHGEF11O15085 1522 aa34.53■■■■□ 3.12
ABCA7-207ENST00000525238 SNAPC4Q5SXM2 1469 aa34.52■■■■□ 3.12
ABCA7-207ENST00000525238 GRIN2BQ13224 1484 aa34.43■■■■□ 3.1
ABCA7-207ENST00000525238 MAGI1Q96QZ7 1491 aaPredicted RBP34.39■■■■□ 3.1
ABCA7-207ENST00000525238 PBRM1Q86U86 1689 aa34.39■■■■□ 3.1
ABCA7-207ENST00000525238 CHMP7Q8WUX9 453 aaPredicted RBP34.38■■■■□ 3.09
ABCA7-207ENST00000525238 GAPVD1Q14C86 1478 aa34.34■■■■□ 3.09
ABCA7-207ENST00000525238 ABCA10Q8WWZ4 1543 aa34.32■■■■□ 3.08
ABCA7-207ENST00000525238 SYNJ1O43426 1573 aa34.29■■■■□ 3.08
ABCA7-207ENST00000525238 SYNJ2O15056 1496 aa34.28■■■■□ 3.08
ABCA7-207ENST00000525238 CYB5RLQ6IPT4 315 aa34.28■■■■□ 3.08
ABCA7-207ENST00000525238 ABCA5Q8WWZ7 1642 aa34.28■■■■□ 3.08
ABCA7-207ENST00000525238 WRNQ14191 1432 aaPredicted RBP eCLIP34.27■■■■□ 3.08
ABCA7-207ENST00000525238 BIVM-ERCC5R4GMW8 1640 aa34.26■■■■□ 3.08
ABCA7-207ENST00000525238 TOP2BQ02880 1626 aa34.25■■■■□ 3.07
ABCA7-207ENST00000525238 CLASP1Q7Z460 1538 aa34.21■■■■□ 3.07
ABCA7-207ENST00000525238 ARAP1Q96P48 1450 aa34.19■■■■□ 3.06
ABCA7-207ENST00000525238 ADAMTS12P58397 1594 aa34.02■■■■□ 3.04
ABCA7-207ENST00000525238 GRIN2AQ12879 1464 aa33.99■■■■□ 3.03
ABCA7-207ENST00000525238 ERICH3Q5RHP9 1530 aa33.91■■■■□ 3.02
ABCA7-207ENST00000525238 FHAD1B1AJZ9 1412 aa33.9■■■■□ 3.02
ABCA7-207ENST00000525238 TRHP20396 242 aaPredicted RBP33.9■■■■□ 3.02
ABCA7-207ENST00000525238 CEP170Q5SW79 1584 aa33.86■■■■□ 3.01
ABCA7-207ENST00000525238 NUP160Q12769 1436 aa33.81■■■■□ 3
ABCA7-207ENST00000525238 ERCC6L2Q5T890 1561 aa33.73■■■□□ 2.99
ABCA7-207ENST00000525238 SHROOM2Q13796 1616 aa33.66■■■□□ 2.98
ABCA7-207ENST00000525238 KIF27Q86VH2 1401 aa33.61■■■□□ 2.97
ABCA7-207ENST00000525238 RUSC2Q8N2Y8 1516 aa33.54■■■□□ 2.96
ABCA7-207ENST00000525238 PRG4Q92954 1404 aaPredicted RBP33.53■■■□□ 2.96
ABCA7-207ENST00000525238 CUL7Q14999 1698 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms