RNA–Protein interactions for RNA: ENST00000525043.4

C8orf49-201, Transcript of chromosome 8 open reading frame 49 (putative), humanhuman

BASIC

Gene C8orf49, Length 1,968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf49-201ENST00000525043 PELP1Q8IZL8 1130 aaKnown RBP27.35■■□□□ 1.97
C8orf49-201ENST00000525043 MYT1Q01538 1121 aa27.08■■□□□ 1.93
C8orf49-201ENST00000525043 TTBK1Q5TCY1 1321 aaPredicted RBP26.23■■□□□ 1.79
C8orf49-201ENST00000525043 NISCHQ9Y2I1 1504 aa26.21■■□□□ 1.79
C8orf49-201ENST00000525043 PRKCSHP14314 528 aaPredicted RBP25.22■■□□□ 1.63
C8orf49-201ENST00000525043 ERICH6Q7L0X2 663 aa24.93■■□□□ 1.58
C8orf49-201ENST00000525043 SLC24A1O60721 1099 aa24.91■■□□□ 1.58
C8orf49-201ENST00000525043 APLP2Q06481 763 aa24.91■■□□□ 1.58
C8orf49-201ENST00000525043 HRCP23327 699 aa24.81■■□□□ 1.56
C8orf49-201ENST00000525043 BCL11AQ9H165 835 aa24.46■■□□□ 1.51
C8orf49-201ENST00000525043 SCAF1Q9H7N4 1312 aaKnown RBP24.41■■□□□ 1.5
C8orf49-201ENST00000525043 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
C8orf49-201ENST00000525043 DAXXQ9UER7 740 aaPredicted RBP23.95■■□□□ 1.42
C8orf49-201ENST00000525043 CENPBP07199 599 aaPredicted RBP23.72■■□□□ 1.39
C8orf49-201ENST00000525043 PPARGC1BQ86YN6 1023 aaKnown RBP23.67■■□□□ 1.38
C8orf49-201ENST00000525043 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.32
C8orf49-201ENST00000525043 EIF5BO60841 1220 aaKnown RBP23.29■■□□□ 1.32
C8orf49-201ENST00000525043 ANP32EQ9BTT0 268 aa23.2■■□□□ 1.3
C8orf49-201ENST00000525043 GTF3C3Q9Y5Q9 886 aa23.03■■□□□ 1.28
C8orf49-201ENST00000525043 CCDC180Q9P1Z9 1646 aa22.99■■□□□ 1.27
C8orf49-201ENST00000525043 NEUROD1Q13562 356 aa22.96■■□□□ 1.27
C8orf49-201ENST00000525043 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
C8orf49-201ENST00000525043 UBE2Q2Q8WVN8 375 aa22.91■■□□□ 1.26
C8orf49-201ENST00000525043 PCGF6Q9BYE7 350 aa22.89■■□□□ 1.25
C8orf49-201ENST00000525043 CSRNP3Q8WYN3 585 aa22.8■■□□□ 1.24
C8orf49-201ENST00000525043 PLEKHG5O94827 1062 aa22.56■■□□□ 1.2
C8orf49-201ENST00000525043 ABCC9O60706 1549 aa22.54■■□□□ 1.2
C8orf49-201ENST00000525043 ANO8Q9HCE9 1232 aaPredicted RBP22.52■■□□□ 1.2
C8orf49-201ENST00000525043 MYO15BQ96JP2 1530 aa22.42■■□□□ 1.18
C8orf49-201ENST00000525043 PODXL2Q9NZ53 605 aa22.38■■□□□ 1.17
C8orf49-201ENST00000525043 DCAF1Q9Y4B6 1507 aa22.29■■□□□ 1.16
C8orf49-201ENST00000525043 PKNOX2Q96KN3 472 aa22.28■■□□□ 1.16
C8orf49-201ENST00000525043 ERICH6BQ5W0A0 696 aa22.19■■□□□ 1.14
C8orf49-201ENST00000525043 DCAF8L2P0C7V8 631 aa22.11■■□□□ 1.13
C8orf49-201ENST00000525043 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
C8orf49-201ENST00000525043 MYT1LQ9UL68 1186 aa22.06■■□□□ 1.12
C8orf49-201ENST00000525043 TSHZ2Q9NRE2 1034 aa22.05■■□□□ 1.12
C8orf49-201ENST00000525043 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
C8orf49-201ENST00000525043 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
C8orf49-201ENST00000525043 SALL2Q9Y467 1007 aaPredicted RBP22.01■■□□□ 1.11
C8orf49-201ENST00000525043 ZCCHC6Q5VYS8 1495 aaKnown RBP21.88■■□□□ 1.09
C8orf49-201ENST00000525043 ARXQ96QS3 562 aa21.84■■□□□ 1.09
C8orf49-201ENST00000525043 NEFLP07196 543 aa21.81■■□□□ 1.08
C8orf49-201ENST00000525043 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
C8orf49-201ENST00000525043 CCDC136Q96JN2 1154 aa21.76■■□□□ 1.07
C8orf49-201ENST00000525043 DIEXFQ68CQ4 756 aaKnown RBP21.7■■□□□ 1.07
C8orf49-201ENST00000525043 PDIA4P13667 645 aaKnown RBP21.61■■□□□ 1.05
C8orf49-201ENST00000525043 KLHL34Q8N239 644 aa21.59■■□□□ 1.05
C8orf49-201ENST00000525043 NACADO15069 1562 aa21.58■■□□□ 1.05
C8orf49-201ENST00000525043 SUPT16HQ9Y5B9 1047 aaKnown RBP21.57■■□□□ 1.04
C8orf49-201ENST00000525043 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
C8orf49-201ENST00000525043 PDE4CQ08493 712 aa21.56■■□□□ 1.04
C8orf49-201ENST00000525043 DEKP35659 375 aaKnown RBP21.54■■□□□ 1.04
C8orf49-201ENST00000525043 FGD1P98174 961 aa21.41■■□□□ 1.02
C8orf49-201ENST00000525043 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.36■■□□□ 1.01
C8orf49-201ENST00000525043 GLIPR1L2Q4G1C9 344 aa21.32■■□□□ 1
C8orf49-201ENST00000525043 TRIM41Q8WV44 630 aa21.3■■□□□ 1
C8orf49-201ENST00000525043 RBM19Q9Y4C8 960 aaKnown RBP21.29■■□□□ 1
C8orf49-201ENST00000525043 MSH5O43196 834 aa21.28■■□□□ 1
C8orf49-201ENST00000525043 SCRIBQ14160 1630 aa21.27■■□□□ 1
C8orf49-201ENST00000525043 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
C8orf49-201ENST00000525043 PABPN1Q86U42 306 aaKnown RBP eCLIP21.24■□□□□ 0.99
C8orf49-201ENST00000525043 FANCIQ9NVI1 1328 aa21.23■□□□□ 0.99
C8orf49-201ENST00000525043 UNC13AQ9UPW8 1703 aa21.22■□□□□ 0.99
C8orf49-201ENST00000525043 AAMPQ13685 434 aa21.21■□□□□ 0.99
C8orf49-201ENST00000525043 ZMYND15Q9H091 742 aa21.21■□□□□ 0.99
C8orf49-201ENST00000525043 TAF7LQ5H9L4 462 aa21.2■□□□□ 0.98
C8orf49-201ENST00000525043 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
C8orf49-201ENST00000525043 TIMELESSQ9UNS1 1208 aa21.17■□□□□ 0.98
C8orf49-201ENST00000525043 BCL11BQ9C0K0 894 aaPredicted RBP21.15■□□□□ 0.98
C8orf49-201ENST00000525043 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
C8orf49-201ENST00000525043 RBM10P98175 930 aaKnown RBP21.04■□□□□ 0.96
C8orf49-201ENST00000525043 BICRAQ9NZM4 1560 aa21.03■□□□□ 0.96
C8orf49-201ENST00000525043 IL27Q8NEV9 243 aa21.03■□□□□ 0.96
C8orf49-201ENST00000525043 RSPH6AQ9H0K4 717 aa21.01■□□□□ 0.95
C8orf49-201ENST00000525043 A0A0U1RQG5 324 aaPredicted RBP21■□□□□ 0.95
C8orf49-201ENST00000525043 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
C8orf49-201ENST00000525043 HOMEZQ8IX15 550 aa20.96■□□□□ 0.95
C8orf49-201ENST00000525043 RTN4Q9NQC3 1192 aaKnown RBP20.94■□□□□ 0.94
C8orf49-201ENST00000525043 VSIG10Q8N0Z9 540 aa20.93■□□□□ 0.94
C8orf49-201ENST00000525043 ZNF316A6NFI3 1004 aaPredicted RBP20.91■□□□□ 0.94
C8orf49-201ENST00000525043 MIER1Q8N108 512 aa20.86■□□□□ 0.93
C8orf49-201ENST00000525043 PLPPR3Q6T4P5 718 aa20.85■□□□□ 0.93
C8orf49-201ENST00000525043 C11orf95C9JLR9 678 aaPredicted RBP20.83■□□□□ 0.93
C8orf49-201ENST00000525043 RSPH4AQ5TD94 716 aa20.79■□□□□ 0.92
C8orf49-201ENST00000525043 CCER1Q8TC90 406 aaPredicted RBP20.79■□□□□ 0.92
C8orf49-201ENST00000525043 ZNF326Q5BKZ1 582 aaKnown RBP20.74■□□□□ 0.91
C8orf49-201ENST00000525043 BRD2P25440 801 aaKnown RBP20.74■□□□□ 0.91
C8orf49-201ENST00000525043 TULP1O00294 542 aaPredicted RBP20.68■□□□□ 0.9
C8orf49-201ENST00000525043 CHMP4AQ9BY43 222 aa20.6■□□□□ 0.89
C8orf49-201ENST00000525043 DNAJC5BQ9UF47 199 aa20.57■□□□□ 0.88
C8orf49-201ENST00000525043 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
C8orf49-201ENST00000525043 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
C8orf49-201ENST00000525043 WASHC2CQ9Y4E1 1318 aa20.52■□□□□ 0.88
C8orf49-201ENST00000525043 PAXIP1Q6ZW49 1069 aaPredicted RBP20.52■□□□□ 0.87
C8orf49-201ENST00000525043 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
C8orf49-201ENST00000525043 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
C8orf49-201ENST00000525043 NAP1L5Q96NT1 182 aaPredicted RBP20.49■□□□□ 0.87
C8orf49-201ENST00000525043 RRP9O43818 475 aaKnown RBP20.48■□□□□ 0.87
C8orf49-201ENST00000525043 NOP58Q9Y2X3 529 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms