RNA–Protein interactions for RNA: ENST00000524954.1

RNF170-204, Transcript of ring finger protein 170, humanhuman

TSL 5

Gene RNF170, Length 195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-204ENST00000524954 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
RNF170-204ENST00000524954 ABCC9O60706 1549 aa30.05■■■□□ 2.4
RNF170-204ENST00000524954 DNAJC5BQ9UF47 199 aa29.74■■■□□ 2.35
RNF170-204ENST00000524954 CCDC180Q9P1Z9 1646 aa28.16■■■□□ 2.1
RNF170-204ENST00000524954 DNAJC5Q9H3Z4 198 aa28.14■■■□□ 2.1
RNF170-204ENST00000524954 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.06
RNF170-204ENST00000524954 RB1CC1Q8TDY2 1594 aa27.65■■■□□ 2.02
RNF170-204ENST00000524954 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
RNF170-204ENST00000524954 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
RNF170-204ENST00000524954 UNC13AQ9UPW8 1703 aa27.1■■□□□ 1.93
RNF170-204ENST00000524954 NACADO15069 1562 aa27.06■■□□□ 1.92
RNF170-204ENST00000524954 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
RNF170-204ENST00000524954 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
RNF170-204ENST00000524954 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
RNF170-204ENST00000524954 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.82
RNF170-204ENST00000524954 CUX2O14529 1486 aa26.19■■□□□ 1.78
RNF170-204ENST00000524954 SHROOM4Q9ULL8 1493 aa26.11■■□□□ 1.77
RNF170-204ENST00000524954 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
RNF170-204ENST00000524954 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
RNF170-204ENST00000524954 SCRIBQ14160 1630 aa25.9■■□□□ 1.74
RNF170-204ENST00000524954 NESP48681 1621 aa25.44■■□□□ 1.66
RNF170-204ENST00000524954 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
RNF170-204ENST00000524954 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
RNF170-204ENST00000524954 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
RNF170-204ENST00000524954 AEBP2Q6ZN18 517 aaPredicted RBP25.15■■□□□ 1.62
RNF170-204ENST00000524954 NCAPD3P42695 1498 aa25.12■■□□□ 1.61
RNF170-204ENST00000524954 SMARCA2P51531 1590 aa25.06■■□□□ 1.6
RNF170-204ENST00000524954 OSCARQ8IYS5 282 aa25.02■■□□□ 1.6
RNF170-204ENST00000524954 ATAD2BQ9ULI0 1458 aa24.9■■□□□ 1.58
RNF170-204ENST00000524954 TRHP20396 242 aaPredicted RBP24.88■■□□□ 1.57
RNF170-204ENST00000524954 KIF21AQ7Z4S6 1674 aa24.86■■□□□ 1.57
RNF170-204ENST00000524954 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
RNF170-204ENST00000524954 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
RNF170-204ENST00000524954 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
RNF170-204ENST00000524954 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
RNF170-204ENST00000524954 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
RNF170-204ENST00000524954 PDS5BQ9NTI5 1447 aa24.68■■□□□ 1.54
RNF170-204ENST00000524954 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
RNF170-204ENST00000524954 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
RNF170-204ENST00000524954 MRC2Q9UBG0 1479 aa24.57■■□□□ 1.52
RNF170-204ENST00000524954 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
RNF170-204ENST00000524954 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
RNF170-204ENST00000524954 WDR62O43379 1518 aa24.49■■□□□ 1.51
RNF170-204ENST00000524954 ILDR1Q86SU0 546 aaPredicted RBP24.44■■□□□ 1.5
RNF170-204ENST00000524954 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
RNF170-204ENST00000524954 CADPSQ9ULU8 1353 aa24.36■■□□□ 1.49
RNF170-204ENST00000524954 ARAP1Q96P48 1450 aa24.21■■□□□ 1.47
RNF170-204ENST00000524954 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
RNF170-204ENST00000524954 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
RNF170-204ENST00000524954 PEG3Q9GZU2 1588 aa24.07■■□□□ 1.44
RNF170-204ENST00000524954 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
RNF170-204ENST00000524954 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
RNF170-204ENST00000524954 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
RNF170-204ENST00000524954 FBLN2P98095 1184 aa23.93■■□□□ 1.42
RNF170-204ENST00000524954 CHD1O14646 1710 aa23.77■■□□□ 1.4
RNF170-204ENST00000524954 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
RNF170-204ENST00000524954 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
RNF170-204ENST00000524954 CFTRP13569 1480 aa23.71■■□□□ 1.39
RNF170-204ENST00000524954 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
RNF170-204ENST00000524954 KDM4FA0A1W2PPD8 638 aa23.64■■□□□ 1.37
RNF170-204ENST00000524954 EIF4G3O43432 1585 aaKnown RBP23.63■■□□□ 1.37
RNF170-204ENST00000524954 WIZO95785 1651 aa23.6■■□□□ 1.37
RNF170-204ENST00000524954 TOPBP1Q92547 1522 aa23.45■■□□□ 1.34
RNF170-204ENST00000524954 CLASP1Q7Z460 1538 aa23.42■■□□□ 1.34
RNF170-204ENST00000524954 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.34
RNF170-204ENST00000524954 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
RNF170-204ENST00000524954 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
RNF170-204ENST00000524954 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
RNF170-204ENST00000524954 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
RNF170-204ENST00000524954 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
RNF170-204ENST00000524954 SYNJ1O43426 1573 aa23.22■■□□□ 1.31
RNF170-204ENST00000524954 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
RNF170-204ENST00000524954 KIF13AQ9H1H9 1805 aa23.18■■□□□ 1.3
RNF170-204ENST00000524954 FAM69CQ0P6D2 419 aa23.14■■□□□ 1.29
RNF170-204ENST00000524954 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
RNF170-204ENST00000524954 FBXO41Q8TF61 875 aa23.13■■□□□ 1.29
RNF170-204ENST00000524954 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
RNF170-204ENST00000524954 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
RNF170-204ENST00000524954 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
RNF170-204ENST00000524954 SOGA1O94964 1423 aa23.08■■□□□ 1.28
RNF170-204ENST00000524954 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
RNF170-204ENST00000524954 HECW2Q9P2P5 1572 aa23.03■■□□□ 1.28
RNF170-204ENST00000524954 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
RNF170-204ENST00000524954 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
RNF170-204ENST00000524954 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
RNF170-204ENST00000524954 ILDR2Q71H61 639 aa22.96■■□□□ 1.27
RNF170-204ENST00000524954 LMTK3Q96Q04 1460 aa22.96■■□□□ 1.27
RNF170-204ENST00000524954 KDM6BO15054 1643 aa22.93■■□□□ 1.26
RNF170-204ENST00000524954 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
RNF170-204ENST00000524954 ADGRL1O94910 1474 aa22.91■■□□□ 1.26
RNF170-204ENST00000524954 ABCC10Q5T3U5 1492 aa22.88■■□□□ 1.25
RNF170-204ENST00000524954 SOCS7O14512 581 aa22.85■■□□□ 1.25
RNF170-204ENST00000524954 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
RNF170-204ENST00000524954 TSPOAP1O95153 1857 aa22.81■■□□□ 1.24
RNF170-204ENST00000524954 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
RNF170-204ENST00000524954 NPM1P06748 294 aaKnown RBP eCLIP22.76■■□□□ 1.23
RNF170-204ENST00000524954 DIP2BQ9P265 1576 aa22.73■■□□□ 1.23
RNF170-204ENST00000524954 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
RNF170-204ENST00000524954 PBRM1Q86U86 1689 aa22.66■■□□□ 1.22
RNF170-204ENST00000524954 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms