RNA–Protein interactions for RNA: ENST00000524853.6

PAX6-219, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-219ENST00000524853 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
PAX6-219ENST00000524853 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
PAX6-219ENST00000524853 ZCCHC6Q5VYS8 1495 aaKnown RBP24.76■■□□□ 1.55
PAX6-219ENST00000524853 ABCC9O60706 1549 aa24.64■■□□□ 1.54
PAX6-219ENST00000524853 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
PAX6-219ENST00000524853 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
PAX6-219ENST00000524853 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.46
PAX6-219ENST00000524853 NACADO15069 1562 aa24.08■■□□□ 1.45
PAX6-219ENST00000524853 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
PAX6-219ENST00000524853 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
PAX6-219ENST00000524853 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
PAX6-219ENST00000524853 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
PAX6-219ENST00000524853 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.31
PAX6-219ENST00000524853 BICRAQ9NZM4 1560 aa23.22■■□□□ 1.31
PAX6-219ENST00000524853 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
PAX6-219ENST00000524853 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
PAX6-219ENST00000524853 RSF1Q96T23 1441 aaPredicted RBP22.87■■□□□ 1.25
PAX6-219ENST00000524853 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
PAX6-219ENST00000524853 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
PAX6-219ENST00000524853 SMARCA4P51532 1647 aa22.74■■□□□ 1.23
PAX6-219ENST00000524853 WIZO95785 1651 aa22.64■■□□□ 1.21
PAX6-219ENST00000524853 EIF4G1Q04637 1599 aaKnown RBP22.54■■□□□ 1.2
PAX6-219ENST00000524853 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
PAX6-219ENST00000524853 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
PAX6-219ENST00000524853 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
PAX6-219ENST00000524853 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
PAX6-219ENST00000524853 BAZ1BQ9UIG0 1483 aaKnown RBP22.3■■□□□ 1.16
PAX6-219ENST00000524853 CC2D2AQ9P2K1 1620 aa22.26■■□□□ 1.15
PAX6-219ENST00000524853 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
PAX6-219ENST00000524853 HMGXB3Q12766 1538 aa22.18■■□□□ 1.14
PAX6-219ENST00000524853 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
PAX6-219ENST00000524853 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
PAX6-219ENST00000524853 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
PAX6-219ENST00000524853 CFTRP13569 1480 aa21.71■■□□□ 1.07
PAX6-219ENST00000524853 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
PAX6-219ENST00000524853 CADPSQ9ULU8 1353 aa21.68■■□□□ 1.06
PAX6-219ENST00000524853 ABCC8Q09428 1581 aa21.67■■□□□ 1.06
PAX6-219ENST00000524853 NESP48681 1621 aa21.58■■□□□ 1.04
PAX6-219ENST00000524853 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.04
PAX6-219ENST00000524853 PRDM2Q13029 1718 aa21.53■■□□□ 1.04
PAX6-219ENST00000524853 LAMC3Q9Y6N6 1575 aa21.51■■□□□ 1.03
PAX6-219ENST00000524853 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
PAX6-219ENST00000524853 SYNJ1O43426 1573 aa21.45■■□□□ 1.02
PAX6-219ENST00000524853 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
PAX6-219ENST00000524853 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
PAX6-219ENST00000524853 CUX1P39880 1505 aa21.35■■□□□ 1.01
PAX6-219ENST00000524853 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1.01
PAX6-219ENST00000524853 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
PAX6-219ENST00000524853 BIVM-ERCC5R4GMW8 1640 aa21.31■■□□□ 1
PAX6-219ENST00000524853 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
PAX6-219ENST00000524853 SOGA1O94964 1423 aa21.24■□□□□ 0.99
PAX6-219ENST00000524853 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
PAX6-219ENST00000524853 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
PAX6-219ENST00000524853 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
PAX6-219ENST00000524853 RUSC2Q8N2Y8 1516 aa21.17■□□□□ 0.98
PAX6-219ENST00000524853 LOC105371045A0A1W2PR82 267 aa21.16■□□□□ 0.98
PAX6-219ENST00000524853 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
PAX6-219ENST00000524853 ERCC6Q03468 1493 aa21.15■□□□□ 0.98
PAX6-219ENST00000524853 MRC2Q9UBG0 1479 aa21.1■□□□□ 0.97
PAX6-219ENST00000524853 EEA1Q15075 1411 aa21.09■□□□□ 0.97
PAX6-219ENST00000524853 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.97
PAX6-219ENST00000524853 POLA1P09884 1462 aaPredicted RBP21.08■□□□□ 0.97
PAX6-219ENST00000524853 CSRNP3Q8WYN3 585 aa21.06■□□□□ 0.96
PAX6-219ENST00000524853 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
PAX6-219ENST00000524853 KIF27Q86VH2 1401 aa21■□□□□ 0.95
PAX6-219ENST00000524853 CUX2O14529 1486 aa21■□□□□ 0.95
PAX6-219ENST00000524853 WDR62O43379 1518 aa20.98■□□□□ 0.95
PAX6-219ENST00000524853 THOC2Q8NI27 1593 aaKnown RBP20.95■□□□□ 0.94
PAX6-219ENST00000524853 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
PAX6-219ENST00000524853 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
PAX6-219ENST00000524853 TDRD9Q8NDG6 1382 aaKnown RBP20.87■□□□□ 0.93
PAX6-219ENST00000524853 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
PAX6-219ENST00000524853 IGF1RP08069 1367 aa20.84■□□□□ 0.93
PAX6-219ENST00000524853 KIF21BO75037 1637 aa20.83■□□□□ 0.92
PAX6-219ENST00000524853 GOLGA3Q08378 1498 aa20.82■□□□□ 0.92
PAX6-219ENST00000524853 UBTFP17480 764 aaKnown RBP20.81■□□□□ 0.92
PAX6-219ENST00000524853 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
PAX6-219ENST00000524853 PRXQ9BXM0 1461 aa20.8■□□□□ 0.92
PAX6-219ENST00000524853 RAPGEF2Q9Y4G8 1499 aa20.8■□□□□ 0.92
PAX6-219ENST00000524853 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
PAX6-219ENST00000524853 GAPVD1Q14C86 1478 aa20.77■□□□□ 0.92
PAX6-219ENST00000524853 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.91
PAX6-219ENST00000524853 ZNF608Q9ULD9 1512 aaPredicted RBP20.74■□□□□ 0.91
PAX6-219ENST00000524853 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
PAX6-219ENST00000524853 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
PAX6-219ENST00000524853 TNIKQ9UKE5 1360 aa20.72■□□□□ 0.91
PAX6-219ENST00000524853 CUL7Q14999 1698 aa20.65■□□□□ 0.9
PAX6-219ENST00000524853 PBRM1Q86U86 1689 aa20.64■□□□□ 0.89
PAX6-219ENST00000524853 EIF4G3O43432 1585 aaKnown RBP20.64■□□□□ 0.89
PAX6-219ENST00000524853 GRIN2BQ13224 1484 aa20.63■□□□□ 0.89
PAX6-219ENST00000524853 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
PAX6-219ENST00000524853 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.89
PAX6-219ENST00000524853 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
PAX6-219ENST00000524853 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
PAX6-219ENST00000524853 ADAMTS12P58397 1594 aa20.52■□□□□ 0.88
PAX6-219ENST00000524853 CLIP1P30622 1438 aa20.51■□□□□ 0.87
PAX6-219ENST00000524853 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
PAX6-219ENST00000524853 FBLN2P98095 1184 aa20.42■□□□□ 0.86
PAX6-219ENST00000524853 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
PAX6-219ENST00000524853 SYNJ2O15056 1496 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms