RNA–Protein interactions for RNA: ENST00000524711.5

EIF3M-202, Transcript of eukaryotic translation initiation factor 3 subunit M, humanhuman

TSL 2

Gene EIF3M, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3M-202ENST00000524711 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.82
EIF3M-202ENST00000524711 ABCC9O60706 1549 aa24.09■■□□□ 1.45
EIF3M-202ENST00000524711 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
EIF3M-202ENST00000524711 RB1CC1Q8TDY2 1594 aa22.85■■□□□ 1.25
EIF3M-202ENST00000524711 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
EIF3M-202ENST00000524711 NACADO15069 1562 aa22.61■■□□□ 1.21
EIF3M-202ENST00000524711 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
EIF3M-202ENST00000524711 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
EIF3M-202ENST00000524711 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
EIF3M-202ENST00000524711 MYO15BQ96JP2 1530 aa22.2■■□□□ 1.14
EIF3M-202ENST00000524711 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.14
EIF3M-202ENST00000524711 BICRAQ9NZM4 1560 aa22.19■■□□□ 1.14
EIF3M-202ENST00000524711 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
EIF3M-202ENST00000524711 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
EIF3M-202ENST00000524711 DCAF1Q9Y4B6 1507 aa21.83■■□□□ 1.09
EIF3M-202ENST00000524711 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.08
EIF3M-202ENST00000524711 SCRIBQ14160 1630 aa21.75■■□□□ 1.07
EIF3M-202ENST00000524711 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
EIF3M-202ENST00000524711 EIF4G1Q04637 1599 aaKnown RBP21.66■■□□□ 1.06
EIF3M-202ENST00000524711 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
EIF3M-202ENST00000524711 DNAJC5Q9H3Z4 198 aa21.08■□□□□ 0.97
EIF3M-202ENST00000524711 CUX2O14529 1486 aa20.86■□□□□ 0.93
EIF3M-202ENST00000524711 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
EIF3M-202ENST00000524711 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
EIF3M-202ENST00000524711 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
EIF3M-202ENST00000524711 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
EIF3M-202ENST00000524711 SMARCA2P51531 1590 aa20.71■□□□□ 0.91
EIF3M-202ENST00000524711 HMGXB3Q12766 1538 aa20.7■□□□□ 0.9
EIF3M-202ENST00000524711 NESP48681 1621 aa20.62■□□□□ 0.89
EIF3M-202ENST00000524711 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
EIF3M-202ENST00000524711 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
EIF3M-202ENST00000524711 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
EIF3M-202ENST00000524711 PEG3Q9GZU2 1588 aa20.5■□□□□ 0.87
EIF3M-202ENST00000524711 LAMC3Q9Y6N6 1575 aa20.47■□□□□ 0.87
EIF3M-202ENST00000524711 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
EIF3M-202ENST00000524711 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
EIF3M-202ENST00000524711 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
EIF3M-202ENST00000524711 CADPSQ9ULU8 1353 aa20.19■□□□□ 0.82
EIF3M-202ENST00000524711 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
EIF3M-202ENST00000524711 WIZO95785 1651 aa20.17■□□□□ 0.82
EIF3M-202ENST00000524711 WDR62O43379 1518 aa20.14■□□□□ 0.81
EIF3M-202ENST00000524711 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
EIF3M-202ENST00000524711 CEP164Q9UPV0 1460 aa20.04■□□□□ 0.8
EIF3M-202ENST00000524711 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
EIF3M-202ENST00000524711 CFTRP13569 1480 aa19.92■□□□□ 0.78
EIF3M-202ENST00000524711 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
EIF3M-202ENST00000524711 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
EIF3M-202ENST00000524711 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
EIF3M-202ENST00000524711 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
EIF3M-202ENST00000524711 OSCARQ8IYS5 282 aa19.83■□□□□ 0.76
EIF3M-202ENST00000524711 RIMBP3CA6NJZ7 1639 aa19.68■□□□□ 0.74
EIF3M-202ENST00000524711 RIMBP3BA6NNM3 1639 aa19.68■□□□□ 0.74
EIF3M-202ENST00000524711 RIMBP3Q9UFD9 1639 aa19.68■□□□□ 0.74
EIF3M-202ENST00000524711 IFT140Q96RY7 1462 aa19.64■□□□□ 0.73
EIF3M-202ENST00000524711 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
EIF3M-202ENST00000524711 CCDC88BA6NC98 1476 aa19.63■□□□□ 0.73
EIF3M-202ENST00000524711 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
EIF3M-202ENST00000524711 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
EIF3M-202ENST00000524711 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
EIF3M-202ENST00000524711 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
EIF3M-202ENST00000524711 DNMBPQ6XZF7 1577 aa19.52■□□□□ 0.72
EIF3M-202ENST00000524711 CHD1O14646 1710 aa19.5■□□□□ 0.71
EIF3M-202ENST00000524711 TARBP1Q13395 1621 aaKnown RBP19.46■□□□□ 0.71
EIF3M-202ENST00000524711 AQRO60306 1485 aaKnown RBP eCLIP19.42■□□□□ 0.72e-7■■■□□ 17.5
EIF3M-202ENST00000524711 CYB5RLQ6IPT4 315 aa19.39■□□□□ 0.69
EIF3M-202ENST00000524711 POLA1P09884 1462 aaPredicted RBP19.37■□□□□ 0.69
EIF3M-202ENST00000524711 ARAP1Q96P48 1450 aa19.34■□□□□ 0.69
EIF3M-202ENST00000524711 FBLN2P98095 1184 aa19.33■□□□□ 0.69
EIF3M-202ENST00000524711 RAD54L2Q9Y4B4 1467 aa19.3■□□□□ 0.68
EIF3M-202ENST00000524711 TRHP20396 242 aaPredicted RBP19.27■□□□□ 0.68
EIF3M-202ENST00000524711 SOGA1O94964 1423 aa19.26■□□□□ 0.67
EIF3M-202ENST00000524711 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
EIF3M-202ENST00000524711 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
EIF3M-202ENST00000524711 SNAPC4Q5SXM2 1469 aa19.23■□□□□ 0.67
EIF3M-202ENST00000524711 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
EIF3M-202ENST00000524711 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
EIF3M-202ENST00000524711 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
EIF3M-202ENST00000524711 CUX1P39880 1505 aa19.17■□□□□ 0.66
EIF3M-202ENST00000524711 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
EIF3M-202ENST00000524711 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.66
EIF3M-202ENST00000524711 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
EIF3M-202ENST00000524711 GRIN2BQ13224 1484 aa19.13■□□□□ 0.65
EIF3M-202ENST00000524711 SYNJ2O15056 1496 aa19.11■□□□□ 0.65
EIF3M-202ENST00000524711 SENP3Q9H4L4 574 aaPredicted RBP19.11■□□□□ 0.65
EIF3M-202ENST00000524711 GAPVD1Q14C86 1478 aa19.04■□□□□ 0.64
EIF3M-202ENST00000524711 ABCA5Q8WWZ7 1642 aa19.01■□□□□ 0.63
EIF3M-202ENST00000524711 ABCA10Q8WWZ4 1543 aa18.98■□□□□ 0.63
EIF3M-202ENST00000524711 ERCC6L2Q5T890 1561 aa18.9■□□□□ 0.62
EIF3M-202ENST00000524711 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
EIF3M-202ENST00000524711 ADAMTS12P58397 1594 aa18.88■□□□□ 0.61
EIF3M-202ENST00000524711 CEP170Q5SW79 1584 aa18.86■□□□□ 0.61
EIF3M-202ENST00000524711 BIVM-ERCC5R4GMW8 1640 aa18.84■□□□□ 0.61
EIF3M-202ENST00000524711 WRNQ14191 1432 aaPredicted RBP eCLIP18.84■□□□□ 0.61
EIF3M-202ENST00000524711 NUP160Q12769 1436 aa18.83■□□□□ 0.6
EIF3M-202ENST00000524711 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
EIF3M-202ENST00000524711 TOP2BQ02880 1626 aa18.81■□□□□ 0.6
EIF3M-202ENST00000524711 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
EIF3M-202ENST00000524711 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
EIF3M-202ENST00000524711 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
EIF3M-202ENST00000524711 KIF13AQ9H1H9 1805 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms