RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 NISCHQ9Y2I1 1504 aa21.38■■□□□ 1.01
PUM1-213ENST00000524516 ABCC9O60706 1549 aa20.68■□□□□ 0.9
PUM1-213ENST00000524516 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
PUM1-213ENST00000524516 CCDC180Q9P1Z9 1646 aa19.66■□□□□ 0.74
PUM1-213ENST00000524516 DNAJC5Q9H3Z4 198 aa19.3■□□□□ 0.68
PUM1-213ENST00000524516 RB1CC1Q8TDY2 1594 aa19.23■□□□□ 0.67
PUM1-213ENST00000524516 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
PUM1-213ENST00000524516 NACADO15069 1562 aa18.81■□□□□ 0.6
PUM1-213ENST00000524516 UNC13AQ9UPW8 1703 aa18.76■□□□□ 0.59
PUM1-213ENST00000524516 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
PUM1-213ENST00000524516 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.58
PUM1-213ENST00000524516 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
PUM1-213ENST00000524516 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.56
PUM1-213ENST00000524516 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
PUM1-213ENST00000524516 SHROOM4Q9ULL8 1493 aa18.31■□□□□ 0.52
PUM1-213ENST00000524516 CUX2O14529 1486 aa18.22■□□□□ 0.51
PUM1-213ENST00000524516 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
PUM1-213ENST00000524516 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
PUM1-213ENST00000524516 ERCC6Q03468 1493 aa17.98■□□□□ 0.47
PUM1-213ENST00000524516 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
PUM1-213ENST00000524516 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
PUM1-213ENST00000524516 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
PUM1-213ENST00000524516 THOC2Q8NI27 1593 aaKnown RBP17.49■□□□□ 0.39
PUM1-213ENST00000524516 NESP48681 1621 aa17.44■□□□□ 0.38
PUM1-213ENST00000524516 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
PUM1-213ENST00000524516 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
PUM1-213ENST00000524516 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
PUM1-213ENST00000524516 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
PUM1-213ENST00000524516 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
PUM1-213ENST00000524516 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
PUM1-213ENST00000524516 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
PUM1-213ENST00000524516 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
PUM1-213ENST00000524516 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
PUM1-213ENST00000524516 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
PUM1-213ENST00000524516 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
PUM1-213ENST00000524516 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
PUM1-213ENST00000524516 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
PUM1-213ENST00000524516 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
PUM1-213ENST00000524516 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
PUM1-213ENST00000524516 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
PUM1-213ENST00000524516 WDR62O43379 1518 aa17■□□□□ 0.31
PUM1-213ENST00000524516 ARHGEF11O15085 1522 aa16.96■□□□□ 0.3
PUM1-213ENST00000524516 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
PUM1-213ENST00000524516 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
PUM1-213ENST00000524516 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
PUM1-213ENST00000524516 CADPSQ9ULU8 1353 aa16.78■□□□□ 0.28
PUM1-213ENST00000524516 ILDR1Q86SU0 546 aaPredicted RBP16.74■□□□□ 0.27
PUM1-213ENST00000524516 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
PUM1-213ENST00000524516 ARAP1Q96P48 1450 aa16.71■□□□□ 0.27
PUM1-213ENST00000524516 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
PUM1-213ENST00000524516 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
PUM1-213ENST00000524516 ZNF608Q9ULD9 1512 aaPredicted RBP16.51■□□□□ 0.23
PUM1-213ENST00000524516 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
PUM1-213ENST00000524516 CHD1O14646 1710 aa16.48■□□□□ 0.23
PUM1-213ENST00000524516 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
PUM1-213ENST00000524516 IFT140Q96RY7 1462 aa16.45■□□□□ 0.22
PUM1-213ENST00000524516 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
PUM1-213ENST00000524516 FBLN2P98095 1184 aa16.41■□□□□ 0.22
PUM1-213ENST00000524516 CFTRP13569 1480 aa16.38■□□□□ 0.21
PUM1-213ENST00000524516 WIZO95785 1651 aa16.25■□□□□ 0.19
PUM1-213ENST00000524516 AQRO60306 1485 aaKnown RBP eCLIP16.23■□□□□ 0.198e-9■■■■□ 20.3
PUM1-213ENST00000524516 CLASP1Q7Z460 1538 aa16.23■□□□□ 0.19
PUM1-213ENST00000524516 TOPBP1Q92547 1522 aa16.2■□□□□ 0.18
PUM1-213ENST00000524516 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
PUM1-213ENST00000524516 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
PUM1-213ENST00000524516 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
PUM1-213ENST00000524516 KDM4FA0A1W2PPD8 638 aa16.15■□□□□ 0.18
PUM1-213ENST00000524516 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
PUM1-213ENST00000524516 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
PUM1-213ENST00000524516 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
PUM1-213ENST00000524516 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
PUM1-213ENST00000524516 DNMBPQ6XZF7 1577 aa16.07■□□□□ 0.16
PUM1-213ENST00000524516 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
PUM1-213ENST00000524516 ERCC6L2Q5T890 1561 aa16.04■□□□□ 0.16
PUM1-213ENST00000524516 TDRD9Q8NDG6 1382 aaKnown RBP15.98■□□□□ 0.15
PUM1-213ENST00000524516 HECW2Q9P2P5 1572 aa15.97■□□□□ 0.15
PUM1-213ENST00000524516 FBXO41Q8TF61 875 aa15.97■□□□□ 0.15
PUM1-213ENST00000524516 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
PUM1-213ENST00000524516 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
PUM1-213ENST00000524516 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
PUM1-213ENST00000524516 KDM6BO15054 1643 aa15.95■□□□□ 0.14
PUM1-213ENST00000524516 SYNJ2O15056 1496 aa15.93■□□□□ 0.14
PUM1-213ENST00000524516 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
PUM1-213ENST00000524516 LMTK3Q96Q04 1460 aa15.92■□□□□ 0.14
PUM1-213ENST00000524516 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
PUM1-213ENST00000524516 FAM69CQ0P6D2 419 aa15.88■□□□□ 0.13
PUM1-213ENST00000524516 SOGA1O94964 1423 aa15.87■□□□□ 0.13
PUM1-213ENST00000524516 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
PUM1-213ENST00000524516 ADGRL1O94910 1474 aa15.85■□□□□ 0.13
PUM1-213ENST00000524516 ABCC10Q5T3U5 1492 aa15.83■□□□□ 0.12
PUM1-213ENST00000524516 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
PUM1-213ENST00000524516 DIP2BQ9P265 1576 aa15.78■□□□□ 0.12
PUM1-213ENST00000524516 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
PUM1-213ENST00000524516 PBRM1Q86U86 1689 aa15.77■□□□□ 0.12
PUM1-213ENST00000524516 SOCS7O14512 581 aa15.76■□□□□ 0.11
PUM1-213ENST00000524516 TSPOAP1O95153 1857 aa15.76■□□□□ 0.11
PUM1-213ENST00000524516 FGD5Q6ZNL6 1462 aa15.74■□□□□ 0.11
PUM1-213ENST00000524516 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
PUM1-213ENST00000524516 MAPKBP1O60336 1514 aa15.7■□□□□ 0.1
PUM1-213ENST00000524516 SHROOM2Q13796 1616 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms