RNA–Protein interactions for RNA: ENST00000524205.3

CDRT4-203, CMT1A duplicated region transcript 4, humanhuman

APPRIS ALT2 TSL 2

Gene CDRT4, Length 632 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4-203ENST00000524205 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
CDRT4-203ENST00000524205 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
CDRT4-203ENST00000524205 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
CDRT4-203ENST00000524205 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
CDRT4-203ENST00000524205 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
CDRT4-203ENST00000524205 CCDC180Q9P1Z9 1646 aa22.2■■□□□ 1.14
CDRT4-203ENST00000524205 ABCC9O60706 1549 aa21.84■■□□□ 1.09
CDRT4-203ENST00000524205 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
CDRT4-203ENST00000524205 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
CDRT4-203ENST00000524205 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
CDRT4-203ENST00000524205 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
CDRT4-203ENST00000524205 NACADO15069 1562 aa20.82■□□□□ 0.92
CDRT4-203ENST00000524205 FOXD1Q16676 465 aa20.67■□□□□ 0.9
CDRT4-203ENST00000524205 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
CDRT4-203ENST00000524205 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
CDRT4-203ENST00000524205 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.89
CDRT4-203ENST00000524205 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
CDRT4-203ENST00000524205 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
CDRT4-203ENST00000524205 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
CDRT4-203ENST00000524205 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
CDRT4-203ENST00000524205 ADRA2BP18089 450 aa20.11■□□□□ 0.81
CDRT4-203ENST00000524205 PPP6R1Q9UPN7 881 aa20.1■□□□□ 0.81
CDRT4-203ENST00000524205 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
CDRT4-203ENST00000524205 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
CDRT4-203ENST00000524205 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
CDRT4-203ENST00000524205 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
CDRT4-203ENST00000524205 PIAS4Q8N2W9 510 aaPredicted RBP19.6■□□□□ 0.73
CDRT4-203ENST00000524205 SMARCA4P51532 1647 aa19.49■□□□□ 0.71
CDRT4-203ENST00000524205 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
CDRT4-203ENST00000524205 BAZ1AQ9NRL2 1556 aaPredicted RBP19.4■□□□□ 0.7
CDRT4-203ENST00000524205 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.68
CDRT4-203ENST00000524205 WIZO95785 1651 aa19.3■□□□□ 0.68
CDRT4-203ENST00000524205 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
CDRT4-203ENST00000524205 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
CDRT4-203ENST00000524205 RSF1Q96T23 1441 aaPredicted RBP19.19■□□□□ 0.66
CDRT4-203ENST00000524205 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
CDRT4-203ENST00000524205 PEG3Q9GZU2 1588 aa19.17■□□□□ 0.66
CDRT4-203ENST00000524205 HMGXB3Q12766 1538 aa19.14■□□□□ 0.65
CDRT4-203ENST00000524205 MSH5O43196 834 aa19.07■□□□□ 0.64
CDRT4-203ENST00000524205 NESP48681 1621 aa18.96■□□□□ 0.63
CDRT4-203ENST00000524205 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
CDRT4-203ENST00000524205 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
CDRT4-203ENST00000524205 PPP4R3CPQ6ZMV5 832 aa18.87■□□□□ 0.61
CDRT4-203ENST00000524205 CCDC88BA6NC98 1476 aa18.79■□□□□ 0.6
CDRT4-203ENST00000524205 KCNA4P22459 653 aa18.74■□□□□ 0.59
CDRT4-203ENST00000524205 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
CDRT4-203ENST00000524205 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
CDRT4-203ENST00000524205 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
CDRT4-203ENST00000524205 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
CDRT4-203ENST00000524205 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
CDRT4-203ENST00000524205 CFTRP13569 1480 aa18.61■□□□□ 0.57
CDRT4-203ENST00000524205 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
CDRT4-203ENST00000524205 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
CDRT4-203ENST00000524205 THOC2Q8NI27 1593 aaKnown RBP18.55■□□□□ 0.56
CDRT4-203ENST00000524205 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
CDRT4-203ENST00000524205 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
CDRT4-203ENST00000524205 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
CDRT4-203ENST00000524205 MRC2Q9UBG0 1479 aa18.44■□□□□ 0.54
CDRT4-203ENST00000524205 URB2Q14146 1524 aaKnown RBP18.41■□□□□ 0.54
CDRT4-203ENST00000524205 CUX2O14529 1486 aa18.37■□□□□ 0.53
CDRT4-203ENST00000524205 WDR62O43379 1518 aa18.37■□□□□ 0.53
CDRT4-203ENST00000524205 CNKSR2Q8WXI2 1034 aa18.33■□□□□ 0.52
CDRT4-203ENST00000524205 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
CDRT4-203ENST00000524205 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
CDRT4-203ENST00000524205 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
CDRT4-203ENST00000524205 CUX1P39880 1505 aa18.23■□□□□ 0.51
CDRT4-203ENST00000524205 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
CDRT4-203ENST00000524205 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.5
CDRT4-203ENST00000524205 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
CDRT4-203ENST00000524205 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
CDRT4-203ENST00000524205 ZNF608Q9ULD9 1512 aaPredicted RBP18.13■□□□□ 0.49
CDRT4-203ENST00000524205 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
CDRT4-203ENST00000524205 MAPK8IP2Q13387 824 aaPredicted RBP18.12■□□□□ 0.49
CDRT4-203ENST00000524205 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
CDRT4-203ENST00000524205 TARBP1Q13395 1621 aaKnown RBP18.07■□□□□ 0.48
CDRT4-203ENST00000524205 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
CDRT4-203ENST00000524205 SOGA1O94964 1423 aa18.04■□□□□ 0.48
CDRT4-203ENST00000524205 BIVM-ERCC5R4GMW8 1640 aa18.03■□□□□ 0.48
CDRT4-203ENST00000524205 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDRT4-203ENST00000524205 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
CDRT4-203ENST00000524205 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
CDRT4-203ENST00000524205 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
CDRT4-203ENST00000524205 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
CDRT4-203ENST00000524205 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
CDRT4-203ENST00000524205 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
CDRT4-203ENST00000524205 RNF216Q9NWF9 866 aaPredicted RBP17.89■□□□□ 0.45
CDRT4-203ENST00000524205 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
CDRT4-203ENST00000524205 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
CDRT4-203ENST00000524205 ABCA5Q8WWZ7 1642 aa17.84■□□□□ 0.45
CDRT4-203ENST00000524205 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.45
CDRT4-203ENST00000524205 CHD1O14646 1710 aa17.83■□□□□ 0.44
CDRT4-203ENST00000524205 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
CDRT4-203ENST00000524205 FBLN2P98095 1184 aa17.82■□□□□ 0.44
CDRT4-203ENST00000524205 GRIN2BQ13224 1484 aa17.77■□□□□ 0.44
CDRT4-203ENST00000524205 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
CDRT4-203ENST00000524205 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
CDRT4-203ENST00000524205 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
CDRT4-203ENST00000524205 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
CDRT4-203ENST00000524205 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
CDRT4-203ENST00000524205 ADAMTS12P58397 1594 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms