RNA–Protein interactions for RNA: ENST00000523911.5

RMDN1-218, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 2 BASIC

Gene RMDN1, Length 950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-218ENST00000523911 NISCHQ9Y2I1 1504 aa32.72■■■□□ 2.83
RMDN1-218ENST00000523911 CCDC180Q9P1Z9 1646 aa28.88■■■□□ 2.21
RMDN1-218ENST00000523911 ABCC9O60706 1549 aa27.63■■■□□ 2.01
RMDN1-218ENST00000523911 ZCCHC6Q5VYS8 1495 aaKnown RBP27.39■■□□□ 1.98
RMDN1-218ENST00000523911 DCAF1Q9Y4B6 1507 aa27.1■■□□□ 1.93
RMDN1-218ENST00000523911 MYO15BQ96JP2 1530 aa26.99■■□□□ 1.91
RMDN1-218ENST00000523911 NACADO15069 1562 aa26.96■■□□□ 1.91
RMDN1-218ENST00000523911 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
RMDN1-218ENST00000523911 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
RMDN1-218ENST00000523911 UNC13AQ9UPW8 1703 aa26.42■■□□□ 1.82
RMDN1-218ENST00000523911 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
RMDN1-218ENST00000523911 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
RMDN1-218ENST00000523911 SHROOM4Q9ULL8 1493 aa26.15■■□□□ 1.78
RMDN1-218ENST00000523911 BICRAQ9NZM4 1560 aa26.11■■□□□ 1.77
RMDN1-218ENST00000523911 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
RMDN1-218ENST00000523911 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
RMDN1-218ENST00000523911 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.66
RMDN1-218ENST00000523911 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
RMDN1-218ENST00000523911 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
RMDN1-218ENST00000523911 BAZ1AQ9NRL2 1556 aaPredicted RBP25.3■■□□□ 1.64
RMDN1-218ENST00000523911 MROH2BQ7Z745 1585 aa25.25■■□□□ 1.63
RMDN1-218ENST00000523911 RSF1Q96T23 1441 aaPredicted RBP25.13■■□□□ 1.61
RMDN1-218ENST00000523911 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.6
RMDN1-218ENST00000523911 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
RMDN1-218ENST00000523911 WIZO95785 1651 aa25.04■■□□□ 1.6
RMDN1-218ENST00000523911 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
RMDN1-218ENST00000523911 SMARCA2P51531 1590 aa24.95■■□□□ 1.58
RMDN1-218ENST00000523911 DNAJC5BQ9UF47 199 aa24.87■■□□□ 1.57
RMDN1-218ENST00000523911 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
RMDN1-218ENST00000523911 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
RMDN1-218ENST00000523911 HMGXB3Q12766 1538 aa24.82■■□□□ 1.56
RMDN1-218ENST00000523911 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
RMDN1-218ENST00000523911 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
RMDN1-218ENST00000523911 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.51
RMDN1-218ENST00000523911 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
RMDN1-218ENST00000523911 CFTRP13569 1480 aa24.14■■□□□ 1.46
RMDN1-218ENST00000523911 CADPSQ9ULU8 1353 aa24.13■■□□□ 1.45
RMDN1-218ENST00000523911 NESP48681 1621 aa24.13■■□□□ 1.45
RMDN1-218ENST00000523911 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
RMDN1-218ENST00000523911 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
RMDN1-218ENST00000523911 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
RMDN1-218ENST00000523911 PDS5BQ9NTI5 1447 aa23.86■■□□□ 1.41
RMDN1-218ENST00000523911 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
RMDN1-218ENST00000523911 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
RMDN1-218ENST00000523911 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
RMDN1-218ENST00000523911 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
RMDN1-218ENST00000523911 CUX1P39880 1505 aa23.66■■□□□ 1.38
RMDN1-218ENST00000523911 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
RMDN1-218ENST00000523911 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
RMDN1-218ENST00000523911 MRC2Q9UBG0 1479 aa23.64■■□□□ 1.38
RMDN1-218ENST00000523911 WRNQ14191 1432 aaPredicted RBP eCLIP23.64■■□□□ 1.37
RMDN1-218ENST00000523911 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
RMDN1-218ENST00000523911 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
RMDN1-218ENST00000523911 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
RMDN1-218ENST00000523911 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
RMDN1-218ENST00000523911 WDR62O43379 1518 aa23.59■■□□□ 1.37
RMDN1-218ENST00000523911 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
RMDN1-218ENST00000523911 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
RMDN1-218ENST00000523911 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
RMDN1-218ENST00000523911 CUX2O14529 1486 aa23.37■■□□□ 1.33
RMDN1-218ENST00000523911 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
RMDN1-218ENST00000523911 WDR97A6NE52 1622 aa23.33■■□□□ 1.33
RMDN1-218ENST00000523911 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
RMDN1-218ENST00000523911 SOGA1O94964 1423 aa23.28■■□□□ 1.32
RMDN1-218ENST00000523911 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
RMDN1-218ENST00000523911 ABCA10Q8WWZ4 1543 aa23.25■■□□□ 1.31
RMDN1-218ENST00000523911 ABCA5Q8WWZ7 1642 aa23.17■■□□□ 1.3
RMDN1-218ENST00000523911 ZNF608Q9ULD9 1512 aaPredicted RBP23.16■■□□□ 1.3
RMDN1-218ENST00000523911 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
RMDN1-218ENST00000523911 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
RMDN1-218ENST00000523911 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
RMDN1-218ENST00000523911 KIF27Q86VH2 1401 aa23.08■■□□□ 1.28
RMDN1-218ENST00000523911 PBRM1Q86U86 1689 aa23.07■■□□□ 1.28
RMDN1-218ENST00000523911 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.28
RMDN1-218ENST00000523911 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
RMDN1-218ENST00000523911 EEA1Q15075 1411 aa23.02■■□□□ 1.28
RMDN1-218ENST00000523911 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
RMDN1-218ENST00000523911 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
RMDN1-218ENST00000523911 IGF1RP08069 1367 aa22.95■■□□□ 1.26
RMDN1-218ENST00000523911 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
RMDN1-218ENST00000523911 CUL7Q14999 1698 aa22.9■■□□□ 1.26
RMDN1-218ENST00000523911 ADAMTS12P58397 1594 aa22.89■■□□□ 1.25
RMDN1-218ENST00000523911 CSRNP3Q8WYN3 585 aa22.88■■□□□ 1.25
RMDN1-218ENST00000523911 SNAPC4Q5SXM2 1469 aa22.87■■□□□ 1.25
RMDN1-218ENST00000523911 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
RMDN1-218ENST00000523911 PRXQ9BXM0 1461 aa22.85■■□□□ 1.25
RMDN1-218ENST00000523911 KIF21BO75037 1637 aa22.83■■□□□ 1.25
RMDN1-218ENST00000523911 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
RMDN1-218ENST00000523911 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
RMDN1-218ENST00000523911 CHD1O14646 1710 aa22.77■■□□□ 1.23
RMDN1-218ENST00000523911 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
RMDN1-218ENST00000523911 RAPGEF2Q9Y4G8 1499 aa22.74■■□□□ 1.23
RMDN1-218ENST00000523911 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
RMDN1-218ENST00000523911 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
RMDN1-218ENST00000523911 CTTNBP2Q8WZ74 1663 aa22.62■■□□□ 1.21
RMDN1-218ENST00000523911 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
RMDN1-218ENST00000523911 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
RMDN1-218ENST00000523911 CHMP7Q8WUX9 453 aaPredicted RBP22.6■■□□□ 1.21
RMDN1-218ENST00000523911 EHMT2Q96KQ7 1210 aa22.58■■□□□ 1.21
RMDN1-218ENST00000523911 NUP160Q12769 1436 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms