RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 NISCHQ9Y2I1 1504 aa34.75■■■■□ 3.15
HMBOX1-210ENST00000523613 CCDC180Q9P1Z9 1646 aa30.48■■■□□ 2.47
HMBOX1-210ENST00000523613 ZCCHC6Q5VYS8 1495 aaKnown RBP29.13■■■□□ 2.25
HMBOX1-210ENST00000523613 ABCC9O60706 1549 aa29.04■■■□□ 2.24
HMBOX1-210ENST00000523613 DCAF8L2P0C7V8 631 aa28.79■■■□□ 2.2
HMBOX1-210ENST00000523613 DCAF1Q9Y4B6 1507 aa28.76■■■□□ 2.19
HMBOX1-210ENST00000523613 MYO15BQ96JP2 1530 aa28.54■■■□□ 2.16
HMBOX1-210ENST00000523613 NACADO15069 1562 aa28.46■■■□□ 2.15
HMBOX1-210ENST00000523613 RB1CC1Q8TDY2 1594 aa28.29■■■□□ 2.12
HMBOX1-210ENST00000523613 SHROOM4Q9ULL8 1493 aa28.1■■■□□ 2.09
HMBOX1-210ENST00000523613 SCRIBQ14160 1630 aa27.95■■■□□ 2.07
HMBOX1-210ENST00000523613 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.01
HMBOX1-210ENST00000523613 BICRAQ9NZM4 1560 aa27.38■■□□□ 1.97
HMBOX1-210ENST00000523613 PABPN1Q86U42 306 aaKnown RBP eCLIP27.31■■□□□ 1.96
HMBOX1-210ENST00000523613 CECR2Q9BXF3 1484 aa26.99■■□□□ 1.91
HMBOX1-210ENST00000523613 SUPT5HO00267 1087 aaKnown RBP26.9■■□□□ 1.9
HMBOX1-210ENST00000523613 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
HMBOX1-210ENST00000523613 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
HMBOX1-210ENST00000523613 MROH2BQ7Z745 1585 aa26.81■■□□□ 1.88
HMBOX1-210ENST00000523613 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
HMBOX1-210ENST00000523613 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
HMBOX1-210ENST00000523613 WIZO95785 1651 aa26.57■■□□□ 1.84
HMBOX1-210ENST00000523613 PEG3Q9GZU2 1588 aa26.47■■□□□ 1.83
HMBOX1-210ENST00000523613 SMARCA2P51531 1590 aa26.42■■□□□ 1.82
HMBOX1-210ENST00000523613 ATAD2BQ9ULI0 1458 aa26.41■■□□□ 1.82
HMBOX1-210ENST00000523613 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
HMBOX1-210ENST00000523613 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
HMBOX1-210ENST00000523613 BAZ1BQ9UIG0 1483 aaKnown RBP26.27■■□□□ 1.8
HMBOX1-210ENST00000523613 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
HMBOX1-210ENST00000523613 HMGXB3Q12766 1538 aa26.2■■□□□ 1.78
HMBOX1-210ENST00000523613 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
HMBOX1-210ENST00000523613 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.72
HMBOX1-210ENST00000523613 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
HMBOX1-210ENST00000523613 CFTRP13569 1480 aa25.57■■□□□ 1.68
HMBOX1-210ENST00000523613 CADPSQ9ULU8 1353 aa25.55■■□□□ 1.68
HMBOX1-210ENST00000523613 PRDM2Q13029 1718 aa25.44■■□□□ 1.66
HMBOX1-210ENST00000523613 LAMC3Q9Y6N6 1575 aa25.42■■□□□ 1.66
HMBOX1-210ENST00000523613 NESP48681 1621 aa25.38■■□□□ 1.65
HMBOX1-210ENST00000523613 ABCC8Q09428 1581 aa25.37■■□□□ 1.65
HMBOX1-210ENST00000523613 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
HMBOX1-210ENST00000523613 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
HMBOX1-210ENST00000523613 FANCD2Q9BXW9 1451 aa25.27■■□□□ 1.64
HMBOX1-210ENST00000523613 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
HMBOX1-210ENST00000523613 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
HMBOX1-210ENST00000523613 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
HMBOX1-210ENST00000523613 TOP2BQ02880 1626 aa25.11■■□□□ 1.61
HMBOX1-210ENST00000523613 CUX1P39880 1505 aa25.1■■□□□ 1.61
HMBOX1-210ENST00000523613 BIVM-ERCC5R4GMW8 1640 aa25.09■■□□□ 1.61
HMBOX1-210ENST00000523613 KIF21AQ7Z4S6 1674 aa25.09■■□□□ 1.61
HMBOX1-210ENST00000523613 DNMBPQ6XZF7 1577 aa25■■□□□ 1.59
HMBOX1-210ENST00000523613 ERCC6Q03468 1493 aa24.98■■□□□ 1.59
HMBOX1-210ENST00000523613 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
HMBOX1-210ENST00000523613 URB2Q14146 1524 aaKnown RBP24.95■■□□□ 1.59
HMBOX1-210ENST00000523613 MRC2Q9UBG0 1479 aa24.93■■□□□ 1.58
HMBOX1-210ENST00000523613 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.57
HMBOX1-210ENST00000523613 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
HMBOX1-210ENST00000523613 SOGA1O94964 1423 aa24.83■■□□□ 1.57
HMBOX1-210ENST00000523613 POLA1P09884 1462 aaPredicted RBP24.8■■□□□ 1.56
HMBOX1-210ENST00000523613 EEA1Q15075 1411 aa24.8■■□□□ 1.56
HMBOX1-210ENST00000523613 WDR62O43379 1518 aa24.79■■□□□ 1.56
HMBOX1-210ENST00000523613 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
HMBOX1-210ENST00000523613 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
HMBOX1-210ENST00000523613 RAD54L2Q9Y4B4 1467 aa24.71■■□□□ 1.55
HMBOX1-210ENST00000523613 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
HMBOX1-210ENST00000523613 CUX2O14529 1486 aa24.68■■□□□ 1.54
HMBOX1-210ENST00000523613 ABCA10Q8WWZ4 1543 aa24.67■■□□□ 1.54
HMBOX1-210ENST00000523613 CSRNP3Q8WYN3 585 aa24.66■■□□□ 1.54
HMBOX1-210ENST00000523613 WDR97A6NE52 1622 aa24.6■■□□□ 1.53
HMBOX1-210ENST00000523613 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
HMBOX1-210ENST00000523613 IFT140Q96RY7 1462 aa24.59■■□□□ 1.53
HMBOX1-210ENST00000523613 LOC105371045A0A1W2PR82 267 aa24.57■■□□□ 1.52
HMBOX1-210ENST00000523613 TDRD9Q8NDG6 1382 aaKnown RBP24.5■■□□□ 1.51
HMBOX1-210ENST00000523613 ABCA5Q8WWZ7 1642 aa24.48■■□□□ 1.51
HMBOX1-210ENST00000523613 EHMT2Q96KQ7 1210 aa24.48■■□□□ 1.51
HMBOX1-210ENST00000523613 KIF21BO75037 1637 aa24.47■■□□□ 1.51
HMBOX1-210ENST00000523613 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
HMBOX1-210ENST00000523613 IGF1RP08069 1367 aa24.46■■□□□ 1.51
HMBOX1-210ENST00000523613 GOLGA3Q08378 1498 aa24.43■■□□□ 1.5
HMBOX1-210ENST00000523613 PRXQ9BXM0 1461 aa24.41■■□□□ 1.5
HMBOX1-210ENST00000523613 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
HMBOX1-210ENST00000523613 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.52e-6■■■■□ 20.6
HMBOX1-210ENST00000523613 ERICH3Q5RHP9 1530 aa24.39■■□□□ 1.5
HMBOX1-210ENST00000523613 CARMIL1Q5VZK9 1371 aa24.36■■□□□ 1.49
HMBOX1-210ENST00000523613 CUL7Q14999 1698 aa24.35■■□□□ 1.49
HMBOX1-210ENST00000523613 RAPGEF2Q9Y4G8 1499 aa24.35■■□□□ 1.49
HMBOX1-210ENST00000523613 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
HMBOX1-210ENST00000523613 PBRM1Q86U86 1689 aa24.34■■□□□ 1.49
HMBOX1-210ENST00000523613 GRIN2BQ13224 1484 aa24.33■■□□□ 1.49
HMBOX1-210ENST00000523613 UBTFP17480 764 aaKnown RBP24.32■■□□□ 1.48
HMBOX1-210ENST00000523613 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
HMBOX1-210ENST00000523613 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.47
HMBOX1-210ENST00000523613 ADAMTS12P58397 1594 aa24.2■■□□□ 1.47
HMBOX1-210ENST00000523613 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
HMBOX1-210ENST00000523613 MAGI1Q96QZ7 1491 aaPredicted RBP24.16■■□□□ 1.46
HMBOX1-210ENST00000523613 CEP162Q5TB80 1403 aa24.12■■□□□ 1.45
HMBOX1-210ENST00000523613 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
HMBOX1-210ENST00000523613 CHMP7Q8WUX9 453 aaPredicted RBP24.03■■□□□ 1.44
HMBOX1-210ENST00000523613 GRIN2AQ12879 1464 aa24.02■■□□□ 1.44
HMBOX1-210ENST00000523613 CLIP1P30622 1438 aa24.01■■□□□ 1.43
HMBOX1-210ENST00000523613 CTTNBP2Q8WZ74 1663 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms