RNA–Protein interactions for RNA: ENST00000523481.5

RNF19A-213, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RNF19A, Length 547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19A-213ENST00000523481 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
RNF19A-213ENST00000523481 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
RNF19A-213ENST00000523481 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
RNF19A-213ENST00000523481 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
RNF19A-213ENST00000523481 FOXD1Q16676 465 aa19.83■□□□□ 0.77
RNF19A-213ENST00000523481 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
RNF19A-213ENST00000523481 NISCHQ9Y2I1 1504 aa19■□□□□ 0.63
RNF19A-213ENST00000523481 MSH5O43196 834 aa18.64■□□□□ 0.57
RNF19A-213ENST00000523481 PIAS4Q8N2W9 510 aaPredicted RBP18.28■□□□□ 0.52
RNF19A-213ENST00000523481 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
RNF19A-213ENST00000523481 ADRA2BP18089 450 aa17.96■□□□□ 0.47
RNF19A-213ENST00000523481 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
RNF19A-213ENST00000523481 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
RNF19A-213ENST00000523481 ABCC9O60706 1549 aa16.79■□□□□ 0.28
RNF19A-213ENST00000523481 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
RNF19A-213ENST00000523481 DMRT2Q9Y5R5 561 aa16.65■□□□□ 0.26
RNF19A-213ENST00000523481 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
RNF19A-213ENST00000523481 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
RNF19A-213ENST00000523481 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
RNF19A-213ENST00000523481 NACADO15069 1562 aa16.04■□□□□ 0.16
RNF19A-213ENST00000523481 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
RNF19A-213ENST00000523481 RNF39Q9H2S5 420 aa15.96■□□□□ 0.15
RNF19A-213ENST00000523481 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
RNF19A-213ENST00000523481 MYO15BQ96JP2 1530 aa15.86■□□□□ 0.13
RNF19A-213ENST00000523481 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
RNF19A-213ENST00000523481 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
RNF19A-213ENST00000523481 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
RNF19A-213ENST00000523481 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
RNF19A-213ENST00000523481 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
RNF19A-213ENST00000523481 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
RNF19A-213ENST00000523481 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
RNF19A-213ENST00000523481 BICRAQ9NZM4 1560 aa15.55■□□□□ 0.08
RNF19A-213ENST00000523481 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
RNF19A-213ENST00000523481 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
RNF19A-213ENST00000523481 SHROOM4Q9ULL8 1493 aa15.45■□□□□ 0.06
RNF19A-213ENST00000523481 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
RNF19A-213ENST00000523481 CNKSR2Q8WXI2 1034 aa15.4■□□□□ 0.06
RNF19A-213ENST00000523481 EIF4G1Q04637 1599 aaKnown RBP15.2■□□□□ 0.02
RNF19A-213ENST00000523481 CC2D2AQ9P2K1 1620 aa15.2■□□□□ 0.02
RNF19A-213ENST00000523481 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
RNF19A-213ENST00000523481 POTEHQ6S545 545 aa15.08■□□□□ 0
RNF19A-213ENST00000523481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.95□□□□□ -0.02
RNF19A-213ENST00000523481 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
RNF19A-213ENST00000523481 BAZ1AQ9NRL2 1556 aaPredicted RBP14.78□□□□□ -0.04
RNF19A-213ENST00000523481 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
RNF19A-213ENST00000523481 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
RNF19A-213ENST00000523481 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
RNF19A-213ENST00000523481 DSG3P32926 999 aa14.73□□□□□ -0.05
RNF19A-213ENST00000523481 HMGXB3Q12766 1538 aa14.71□□□□□ -0.06
RNF19A-213ENST00000523481 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
RNF19A-213ENST00000523481 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
RNF19A-213ENST00000523481 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
RNF19A-213ENST00000523481 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
RNF19A-213ENST00000523481 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
RNF19A-213ENST00000523481 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
RNF19A-213ENST00000523481 MROH2BQ7Z745 1585 aa14.62□□□□□ -0.07
RNF19A-213ENST00000523481 CAPN15O75808 1086 aa14.57□□□□□ -0.08
RNF19A-213ENST00000523481 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
RNF19A-213ENST00000523481 WIZO95785 1651 aa14.49□□□□□ -0.09
RNF19A-213ENST00000523481 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
RNF19A-213ENST00000523481 NESP48681 1621 aa14.44□□□□□ -0.1
RNF19A-213ENST00000523481 CUX2O14529 1486 aa14.43□□□□□ -0.1
RNF19A-213ENST00000523481 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
RNF19A-213ENST00000523481 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
RNF19A-213ENST00000523481 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
RNF19A-213ENST00000523481 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.11
RNF19A-213ENST00000523481 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
RNF19A-213ENST00000523481 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
RNF19A-213ENST00000523481 ABCB7O75027 752 aa14.26□□□□□ -0.13
RNF19A-213ENST00000523481 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
RNF19A-213ENST00000523481 CFTRP13569 1480 aa14.2□□□□□ -0.14
RNF19A-213ENST00000523481 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
RNF19A-213ENST00000523481 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
RNF19A-213ENST00000523481 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
RNF19A-213ENST00000523481 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
RNF19A-213ENST00000523481 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
RNF19A-213ENST00000523481 DNAJC5Q9H3Z4 198 aa14.16□□□□□ -0.14
RNF19A-213ENST00000523481 WDR62O43379 1518 aa14.15□□□□□ -0.14
RNF19A-213ENST00000523481 CCDC88BA6NC98 1476 aa14.14□□□□□ -0.15
RNF19A-213ENST00000523481 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
RNF19A-213ENST00000523481 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
RNF19A-213ENST00000523481 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
RNF19A-213ENST00000523481 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
RNF19A-213ENST00000523481 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
RNF19A-213ENST00000523481 APLP2Q06481 763 aa13.93□□□□□ -0.18
RNF19A-213ENST00000523481 TOPBP1Q92547 1522 aa13.93□□□□□ -0.18
RNF19A-213ENST00000523481 DNMBPQ6XZF7 1577 aa13.92□□□□□ -0.18
RNF19A-213ENST00000523481 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
RNF19A-213ENST00000523481 IFT140Q96RY7 1462 aa13.91□□□□□ -0.18
RNF19A-213ENST00000523481 SP7Q8TDD2 431 aaPredicted RBP13.82□□□□□ -0.2
RNF19A-213ENST00000523481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
RNF19A-213ENST00000523481 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
RNF19A-213ENST00000523481 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
RNF19A-213ENST00000523481 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
RNF19A-213ENST00000523481 POLA1P09884 1462 aaPredicted RBP13.79□□□□□ -0.2
RNF19A-213ENST00000523481 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
RNF19A-213ENST00000523481 KCNA4P22459 653 aa13.78□□□□□ -0.2
RNF19A-213ENST00000523481 TARBP1Q13395 1621 aaKnown RBP13.78□□□□□ -0.2
RNF19A-213ENST00000523481 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
RNF19A-213ENST00000523481 SOGA1O94964 1423 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms