RNA–Protein interactions for RNA: ENST00000523348.1

SORBS3-216, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 2

Gene SORBS3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-216ENST00000523348 NISCHQ9Y2I1 1504 aa31.81■■■□□ 2.68
SORBS3-216ENST00000523348 CCDC180Q9P1Z9 1646 aa28.32■■■□□ 2.12
SORBS3-216ENST00000523348 ABCC9O60706 1549 aa27.78■■■□□ 2.04
SORBS3-216ENST00000523348 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
SORBS3-216ENST00000523348 NACADO15069 1562 aa26.68■■□□□ 1.86
SORBS3-216ENST00000523348 DCAF8L2P0C7V8 631 aa26.54■■□□□ 1.84
SORBS3-216ENST00000523348 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
SORBS3-216ENST00000523348 ZCCHC6Q5VYS8 1495 aaKnown RBP26.48■■□□□ 1.83
SORBS3-216ENST00000523348 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
SORBS3-216ENST00000523348 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
SORBS3-216ENST00000523348 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.741e-7■■■□□ 16.8
SORBS3-216ENST00000523348 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
SORBS3-216ENST00000523348 SCRIBQ14160 1630 aa25.78■■□□□ 1.72
SORBS3-216ENST00000523348 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
SORBS3-216ENST00000523348 DNAJC5BQ9UF47 199 aa25.61■■□□□ 1.69
SORBS3-216ENST00000523348 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
SORBS3-216ENST00000523348 CC2D2AQ9P2K1 1620 aa25.13■■□□□ 1.61
SORBS3-216ENST00000523348 CECR2Q9BXF3 1484 aa25■■□□□ 1.59
SORBS3-216ENST00000523348 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
SORBS3-216ENST00000523348 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
SORBS3-216ENST00000523348 NCAPD3P42695 1498 aa24.64■■□□□ 1.53
SORBS3-216ENST00000523348 ATAD2BQ9ULI0 1458 aa24.6■■□□□ 1.53
SORBS3-216ENST00000523348 SMARCA2P51531 1590 aa24.58■■□□□ 1.52
SORBS3-216ENST00000523348 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
SORBS3-216ENST00000523348 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
SORBS3-216ENST00000523348 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
SORBS3-216ENST00000523348 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
SORBS3-216ENST00000523348 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
SORBS3-216ENST00000523348 WIZO95785 1651 aa24.18■■□□□ 1.46
SORBS3-216ENST00000523348 NESP48681 1621 aa24.01■■□□□ 1.43
SORBS3-216ENST00000523348 LAMC3Q9Y6N6 1575 aa23.98■■□□□ 1.43
SORBS3-216ENST00000523348 TOP2AP11388 1531 aaKnown RBP23.97■■□□□ 1.43
SORBS3-216ENST00000523348 ERCC6Q03468 1493 aa23.97■■□□□ 1.43
SORBS3-216ENST00000523348 CADPSQ9ULU8 1353 aa23.9■■□□□ 1.42
SORBS3-216ENST00000523348 PDS5BQ9NTI5 1447 aa23.83■■□□□ 1.4
SORBS3-216ENST00000523348 CUX2O14529 1486 aa23.8■■□□□ 1.4
SORBS3-216ENST00000523348 CFTRP13569 1480 aa23.74■■□□□ 1.39
SORBS3-216ENST00000523348 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
SORBS3-216ENST00000523348 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
SORBS3-216ENST00000523348 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
SORBS3-216ENST00000523348 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
SORBS3-216ENST00000523348 CEP164Q9UPV0 1460 aa23.58■■□□□ 1.37
SORBS3-216ENST00000523348 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
SORBS3-216ENST00000523348 WDR62O43379 1518 aa23.51■■□□□ 1.35
SORBS3-216ENST00000523348 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
SORBS3-216ENST00000523348 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
SORBS3-216ENST00000523348 URB2Q14146 1524 aaKnown RBP23.37■■□□□ 1.33
SORBS3-216ENST00000523348 ABCC8Q09428 1581 aa23.24■■□□□ 1.31
SORBS3-216ENST00000523348 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
SORBS3-216ENST00000523348 DNAJC5Q9H3Z4 198 aa23.19■■□□□ 1.3
SORBS3-216ENST00000523348 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
SORBS3-216ENST00000523348 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
SORBS3-216ENST00000523348 POLA1P09884 1462 aaPredicted RBP23■■□□□ 1.27
SORBS3-216ENST00000523348 CUX1P39880 1505 aa22.98■■□□□ 1.27
SORBS3-216ENST00000523348 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
SORBS3-216ENST00000523348 TARBP1Q13395 1621 aaKnown RBP22.96■■□□□ 1.27
SORBS3-216ENST00000523348 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
SORBS3-216ENST00000523348 SOGA1O94964 1423 aa22.91■■□□□ 1.26
SORBS3-216ENST00000523348 RAD54L2Q9Y4B4 1467 aa22.88■■□□□ 1.25
SORBS3-216ENST00000523348 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
SORBS3-216ENST00000523348 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.252e-6■■■□□ 17.2
SORBS3-216ENST00000523348 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
SORBS3-216ENST00000523348 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
SORBS3-216ENST00000523348 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
SORBS3-216ENST00000523348 OSCARQ8IYS5 282 aa22.78■■□□□ 1.24
SORBS3-216ENST00000523348 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
SORBS3-216ENST00000523348 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
SORBS3-216ENST00000523348 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
SORBS3-216ENST00000523348 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
SORBS3-216ENST00000523348 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
SORBS3-216ENST00000523348 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
SORBS3-216ENST00000523348 MAGI1Q96QZ7 1491 aaPredicted RBP22.63■■□□□ 1.21
SORBS3-216ENST00000523348 SNAPC4Q5SXM2 1469 aa22.62■■□□□ 1.21
SORBS3-216ENST00000523348 ABCA5Q8WWZ7 1642 aa22.62■■□□□ 1.21
SORBS3-216ENST00000523348 CHD1O14646 1710 aa22.57■■□□□ 1.2
SORBS3-216ENST00000523348 FBLN2P98095 1184 aa22.56■■□□□ 1.2
SORBS3-216ENST00000523348 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
SORBS3-216ENST00000523348 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
SORBS3-216ENST00000523348 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
SORBS3-216ENST00000523348 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
SORBS3-216ENST00000523348 ADAMTS12P58397 1594 aa22.41■■□□□ 1.18
SORBS3-216ENST00000523348 ARHGEF11O15085 1522 aa22.4■■□□□ 1.18
SORBS3-216ENST00000523348 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
SORBS3-216ENST00000523348 CLASP1Q7Z460 1538 aa22.39■■□□□ 1.17
SORBS3-216ENST00000523348 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.17
SORBS3-216ENST00000523348 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.17
SORBS3-216ENST00000523348 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.17
SORBS3-216ENST00000523348 GRIN2AQ12879 1464 aa22.37■■□□□ 1.17
SORBS3-216ENST00000523348 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
SORBS3-216ENST00000523348 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
SORBS3-216ENST00000523348 NUP160Q12769 1436 aa22.3■■□□□ 1.16
SORBS3-216ENST00000523348 IGF1RP08069 1367 aa22.28■■□□□ 1.16
SORBS3-216ENST00000523348 CEP170Q5SW79 1584 aa22.24■■□□□ 1.15
SORBS3-216ENST00000523348 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
SORBS3-216ENST00000523348 CUL7Q14999 1698 aa22.2■■□□□ 1.14
SORBS3-216ENST00000523348 CYB5RLQ6IPT4 315 aa22.18■■□□□ 1.14
SORBS3-216ENST00000523348 CARMIL1Q5VZK9 1371 aa22.13■■□□□ 1.13
SORBS3-216ENST00000523348 SHROOM2Q13796 1616 aa22.12■■□□□ 1.13
SORBS3-216ENST00000523348 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
SORBS3-216ENST00000523348 KIAA0586Q9BVV6 1533 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms