RNA–Protein interactions for RNA: ENST00000523255.5

RNF19A-212, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RNF19A, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19A-212ENST00000523255 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
RNF19A-212ENST00000523255 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
RNF19A-212ENST00000523255 ABCC9O60706 1549 aa22.65■■□□□ 1.22
RNF19A-212ENST00000523255 DCAF8L2P0C7V8 631 aa22.24■■□□□ 1.15
RNF19A-212ENST00000523255 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
RNF19A-212ENST00000523255 NACADO15069 1562 aa21.99■■□□□ 1.11
RNF19A-212ENST00000523255 RB1CC1Q8TDY2 1594 aa21.97■■□□□ 1.11
RNF19A-212ENST00000523255 DCAF1Q9Y4B6 1507 aa21.94■■□□□ 1.1
RNF19A-212ENST00000523255 MYO15BQ96JP2 1530 aa21.88■■□□□ 1.09
RNF19A-212ENST00000523255 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
RNF19A-212ENST00000523255 UNC13AQ9UPW8 1703 aa21.46■■□□□ 1.03
RNF19A-212ENST00000523255 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
RNF19A-212ENST00000523255 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
RNF19A-212ENST00000523255 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
RNF19A-212ENST00000523255 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
RNF19A-212ENST00000523255 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
RNF19A-212ENST00000523255 CECR2Q9BXF3 1484 aa20.6■□□□□ 0.89
RNF19A-212ENST00000523255 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
RNF19A-212ENST00000523255 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
RNF19A-212ENST00000523255 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
RNF19A-212ENST00000523255 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
RNF19A-212ENST00000523255 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
RNF19A-212ENST00000523255 WIZO95785 1651 aa20.32■□□□□ 0.84
RNF19A-212ENST00000523255 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
RNF19A-212ENST00000523255 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
RNF19A-212ENST00000523255 PEG3Q9GZU2 1588 aa20.27■□□□□ 0.84
RNF19A-212ENST00000523255 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
RNF19A-212ENST00000523255 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
RNF19A-212ENST00000523255 NCAPD3P42695 1498 aa20.2■□□□□ 0.82
RNF19A-212ENST00000523255 HMGXB3Q12766 1538 aa20.2■□□□□ 0.82
RNF19A-212ENST00000523255 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
RNF19A-212ENST00000523255 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
RNF19A-212ENST00000523255 LAMC3Q9Y6N6 1575 aa19.71■□□□□ 0.75
RNF19A-212ENST00000523255 CADPSQ9ULU8 1353 aa19.69■□□□□ 0.74
RNF19A-212ENST00000523255 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
RNF19A-212ENST00000523255 NESP48681 1621 aa19.65■□□□□ 0.74
RNF19A-212ENST00000523255 CFTRP13569 1480 aa19.61■□□□□ 0.73
RNF19A-212ENST00000523255 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
RNF19A-212ENST00000523255 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
RNF19A-212ENST00000523255 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.71
RNF19A-212ENST00000523255 FANCD2Q9BXW9 1451 aa19.5■□□□□ 0.71
RNF19A-212ENST00000523255 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
RNF19A-212ENST00000523255 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
RNF19A-212ENST00000523255 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
RNF19A-212ENST00000523255 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.68
RNF19A-212ENST00000523255 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
RNF19A-212ENST00000523255 DNMBPQ6XZF7 1577 aa19.25■□□□□ 0.67
RNF19A-212ENST00000523255 URB2Q14146 1524 aaKnown RBP19.22■□□□□ 0.67
RNF19A-212ENST00000523255 WDR62O43379 1518 aa19.21■□□□□ 0.67
RNF19A-212ENST00000523255 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
RNF19A-212ENST00000523255 CUX1P39880 1505 aa19.17■□□□□ 0.66
RNF19A-212ENST00000523255 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
RNF19A-212ENST00000523255 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
RNF19A-212ENST00000523255 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
RNF19A-212ENST00000523255 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
RNF19A-212ENST00000523255 CUX2O14529 1486 aa19.14■□□□□ 0.65
RNF19A-212ENST00000523255 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
RNF19A-212ENST00000523255 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
RNF19A-212ENST00000523255 SOGA1O94964 1423 aa19.03■□□□□ 0.64
RNF19A-212ENST00000523255 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
RNF19A-212ENST00000523255 IFT140Q96RY7 1462 aa19.03■□□□□ 0.64
RNF19A-212ENST00000523255 RAD54L2Q9Y4B4 1467 aa18.98■□□□□ 0.63
RNF19A-212ENST00000523255 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
RNF19A-212ENST00000523255 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
RNF19A-212ENST00000523255 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
RNF19A-212ENST00000523255 EIF4G3O43432 1585 aaKnown RBP18.86■□□□□ 0.61
RNF19A-212ENST00000523255 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
RNF19A-212ENST00000523255 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
RNF19A-212ENST00000523255 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
RNF19A-212ENST00000523255 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
RNF19A-212ENST00000523255 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.6
RNF19A-212ENST00000523255 GAPVD1Q14C86 1478 aa18.82■□□□□ 0.6
RNF19A-212ENST00000523255 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
RNF19A-212ENST00000523255 GRIN2BQ13224 1484 aa18.77■□□□□ 0.59
RNF19A-212ENST00000523255 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
RNF19A-212ENST00000523255 EEA1Q15075 1411 aa18.74■□□□□ 0.59
RNF19A-212ENST00000523255 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
RNF19A-212ENST00000523255 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
RNF19A-212ENST00000523255 FBLN2P98095 1184 aa18.68■□□□□ 0.58
RNF19A-212ENST00000523255 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
RNF19A-212ENST00000523255 CUL7Q14999 1698 aa18.68■□□□□ 0.58
RNF19A-212ENST00000523255 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
RNF19A-212ENST00000523255 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.57
RNF19A-212ENST00000523255 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
RNF19A-212ENST00000523255 ADAMTS12P58397 1594 aa18.62■□□□□ 0.57
RNF19A-212ENST00000523255 CHD1O14646 1710 aa18.61■□□□□ 0.57
RNF19A-212ENST00000523255 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
RNF19A-212ENST00000523255 IGF1RP08069 1367 aa18.61■□□□□ 0.57
RNF19A-212ENST00000523255 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
RNF19A-212ENST00000523255 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
RNF19A-212ENST00000523255 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
RNF19A-212ENST00000523255 EHMT2Q96KQ7 1210 aa18.54■□□□□ 0.56
RNF19A-212ENST00000523255 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
RNF19A-212ENST00000523255 KIF21BO75037 1637 aa18.49■□□□□ 0.55
RNF19A-212ENST00000523255 PRXQ9BXM0 1461 aa18.46■□□□□ 0.55
RNF19A-212ENST00000523255 UBTFP17480 764 aaKnown RBP18.46■□□□□ 0.55
RNF19A-212ENST00000523255 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
RNF19A-212ENST00000523255 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
RNF19A-212ENST00000523255 CTTNBP2Q8WZ74 1663 aa18.43■□□□□ 0.54
RNF19A-212ENST00000523255 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms