RNA–Protein interactions for RNA: ENST00000523210.1

IGHV3-65-201, Transcript of immunoglobulin heavy variable 3-65 (pseudogene), humanhuman

BASIC

Gene IGHV3-65, Length 341 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-65-201ENST00000523210 NISCHQ9Y2I1 1504 aa41.63■■■■■ 4.25
IGHV3-65-201ENST00000523210 CCDC180Q9P1Z9 1646 aa36.92■■■■□ 3.5
IGHV3-65-201ENST00000523210 ABCC9O60706 1549 aa36.11■■■■□ 3.37
IGHV3-65-201ENST00000523210 NACADO15069 1562 aa34.76■■■■□ 3.16
IGHV3-65-201ENST00000523210 RB1CC1Q8TDY2 1594 aa34.76■■■■□ 3.16
IGHV3-65-201ENST00000523210 DCAF8L2P0C7V8 631 aa34.71■■■■□ 3.15
IGHV3-65-201ENST00000523210 ZCCHC6Q5VYS8 1495 aaKnown RBP34.7■■■■□ 3.15
IGHV3-65-201ENST00000523210 MYO15BQ96JP2 1530 aa34.62■■■■□ 3.13
IGHV3-65-201ENST00000523210 DCAF1Q9Y4B6 1507 aa34.48■■■■□ 3.11
IGHV3-65-201ENST00000523210 UNC13AQ9UPW8 1703 aa33.86■■■■□ 3.01
IGHV3-65-201ENST00000523210 PABPN1Q86U42 306 aaKnown RBP eCLIP33.78■■■■□ 3
IGHV3-65-201ENST00000523210 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
IGHV3-65-201ENST00000523210 SCRIBQ14160 1630 aa33.68■■■□□ 2.98
IGHV3-65-201ENST00000523210 SHROOM4Q9ULL8 1493 aa33.42■■■□□ 2.94
IGHV3-65-201ENST00000523210 DNAJC5BQ9UF47 199 aa33.16■■■□□ 2.9
IGHV3-65-201ENST00000523210 EIF4G1Q04637 1599 aaKnown RBP32.83■■■□□ 2.85
IGHV3-65-201ENST00000523210 CC2D2AQ9P2K1 1620 aa32.66■■■□□ 2.82
IGHV3-65-201ENST00000523210 CECR2Q9BXF3 1484 aa32.47■■■□□ 2.79
IGHV3-65-201ENST00000523210 SMARCA4P51532 1647 aa32.25■■■□□ 2.75
IGHV3-65-201ENST00000523210 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
IGHV3-65-201ENST00000523210 ATAD2BQ9ULI0 1458 aa32.12■■■□□ 2.73
IGHV3-65-201ENST00000523210 NCAPD3P42695 1498 aa32.11■■■□□ 2.73
IGHV3-65-201ENST00000523210 MROH2BQ7Z745 1585 aa32.07■■■□□ 2.72
IGHV3-65-201ENST00000523210 SMARCA2P51531 1590 aa32.06■■■□□ 2.72
IGHV3-65-201ENST00000523210 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
IGHV3-65-201ENST00000523210 HMGXB3Q12766 1538 aa31.92■■■□□ 2.7
IGHV3-65-201ENST00000523210 BAZ1BQ9UIG0 1483 aaKnown RBP31.83■■■□□ 2.69
IGHV3-65-201ENST00000523210 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
IGHV3-65-201ENST00000523210 WIZO95785 1651 aa31.67■■■□□ 2.66
IGHV3-65-201ENST00000523210 TOP2AP11388 1531 aaKnown RBP31.39■■■□□ 2.61
IGHV3-65-201ENST00000523210 NESP48681 1621 aa31.27■■■□□ 2.6
IGHV3-65-201ENST00000523210 LAMC3Q9Y6N6 1575 aa31.2■■■□□ 2.58
IGHV3-65-201ENST00000523210 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
IGHV3-65-201ENST00000523210 ERCC6Q03468 1493 aa31.12■■■□□ 2.57
IGHV3-65-201ENST00000523210 CCDC88BA6NC98 1476 aa31.03■■■□□ 2.56
IGHV3-65-201ENST00000523210 PDS5BQ9NTI5 1447 aa31.03■■■□□ 2.56
IGHV3-65-201ENST00000523210 CFTRP13569 1480 aa31■■■□□ 2.55
IGHV3-65-201ENST00000523210 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
IGHV3-65-201ENST00000523210 KIF21AQ7Z4S6 1674 aa30.82■■■□□ 2.52
IGHV3-65-201ENST00000523210 CUX2O14529 1486 aa30.82■■■□□ 2.52
IGHV3-65-201ENST00000523210 FANCD2Q9BXW9 1451 aa30.78■■■□□ 2.52
IGHV3-65-201ENST00000523210 THOC2Q8NI27 1593 aaKnown RBP30.77■■■□□ 2.52
IGHV3-65-201ENST00000523210 CEP164Q9UPV0 1460 aa30.73■■■□□ 2.51
IGHV3-65-201ENST00000523210 MRC2Q9UBG0 1479 aa30.69■■■□□ 2.5
IGHV3-65-201ENST00000523210 PRDM2Q13029 1718 aa30.6■■■□□ 2.49
IGHV3-65-201ENST00000523210 WDR62O43379 1518 aa30.58■■■□□ 2.49
IGHV3-65-201ENST00000523210 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
IGHV3-65-201ENST00000523210 ABCC8Q09428 1581 aa30.32■■■□□ 2.44
IGHV3-65-201ENST00000523210 TOPBP1Q92547 1522 aa30.29■■■□□ 2.44
IGHV3-65-201ENST00000523210 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
IGHV3-65-201ENST00000523210 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
IGHV3-65-201ENST00000523210 CUX1P39880 1505 aa30.08■■■□□ 2.41
IGHV3-65-201ENST00000523210 POLA1P09884 1462 aaPredicted RBP30.05■■■□□ 2.4
IGHV3-65-201ENST00000523210 FGD5Q6ZNL6 1462 aa29.97■■■□□ 2.39
IGHV3-65-201ENST00000523210 ZNF608Q9ULD9 1512 aaPredicted RBP29.95■■■□□ 2.38
IGHV3-65-201ENST00000523210 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
IGHV3-65-201ENST00000523210 SOGA1O94964 1423 aa29.93■■■□□ 2.38
IGHV3-65-201ENST00000523210 WRNQ14191 1432 aaPredicted RBP eCLIP29.92■■■□□ 2.38
IGHV3-65-201ENST00000523210 RAD54L2Q9Y4B4 1467 aa29.91■■■□□ 2.38
IGHV3-65-201ENST00000523210 DNAJC5Q9H3Z4 198 aa29.84■■■□□ 2.37
IGHV3-65-201ENST00000523210 TOP2BQ02880 1626 aa29.82■■■□□ 2.36
IGHV3-65-201ENST00000523210 SYNJ1O43426 1573 aa29.8■■■□□ 2.36
IGHV3-65-201ENST00000523210 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.36
IGHV3-65-201ENST00000523210 BIVM-ERCC5R4GMW8 1640 aa29.79■■■□□ 2.36
IGHV3-65-201ENST00000523210 EIF4G3O43432 1585 aaKnown RBP29.79■■■□□ 2.36
IGHV3-65-201ENST00000523210 TDRD9Q8NDG6 1382 aaKnown RBP29.75■■■□□ 2.35
IGHV3-65-201ENST00000523210 WDR97A6NE52 1622 aa29.73■■■□□ 2.35
IGHV3-65-201ENST00000523210 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
IGHV3-65-201ENST00000523210 GRIN2BQ13224 1484 aa29.58■■■□□ 2.33
IGHV3-65-201ENST00000523210 GAPVD1Q14C86 1478 aa29.58■■■□□ 2.33
IGHV3-65-201ENST00000523210 OSCARQ8IYS5 282 aa29.56■■■□□ 2.32
IGHV3-65-201ENST00000523210 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
IGHV3-65-201ENST00000523210 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.31
IGHV3-65-201ENST00000523210 MAGI1Q96QZ7 1491 aaPredicted RBP29.49■■■□□ 2.31
IGHV3-65-201ENST00000523210 PBRM1Q86U86 1689 aa29.41■■■□□ 2.3
IGHV3-65-201ENST00000523210 FBLN2P98095 1184 aa29.4■■■□□ 2.3
IGHV3-65-201ENST00000523210 SYNJ2O15056 1496 aa29.37■■■□□ 2.29
IGHV3-65-201ENST00000523210 CHMP7Q8WUX9 453 aaPredicted RBP29.36■■■□□ 2.29
IGHV3-65-201ENST00000523210 CHD1O14646 1710 aa29.35■■■□□ 2.29
IGHV3-65-201ENST00000523210 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
IGHV3-65-201ENST00000523210 KIF27Q86VH2 1401 aa29.3■■■□□ 2.28
IGHV3-65-201ENST00000523210 FHAD1B1AJZ9 1412 aa29.26■■■□□ 2.27
IGHV3-65-201ENST00000523210 ADAMTS12P58397 1594 aa29.26■■■□□ 2.27
IGHV3-65-201ENST00000523210 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
IGHV3-65-201ENST00000523210 IGF1RP08069 1367 aa29.2■■■□□ 2.26
IGHV3-65-201ENST00000523210 GRIN2AQ12879 1464 aa29.18■■■□□ 2.26
IGHV3-65-201ENST00000523210 CLASP1Q7Z460 1538 aa29.14■■■□□ 2.25
IGHV3-65-201ENST00000523210 NUP160Q12769 1436 aa29.09■■■□□ 2.25
IGHV3-65-201ENST00000523210 ARHGEF11O15085 1522 aa29.04■■■□□ 2.24
IGHV3-65-201ENST00000523210 CUL7Q14999 1698 aa29.03■■■□□ 2.24
IGHV3-65-201ENST00000523210 RUSC2Q8N2Y8 1516 aa29.02■■■□□ 2.24
IGHV3-65-201ENST00000523210 CARMIL1Q5VZK9 1371 aa29.01■■■□□ 2.24
IGHV3-65-201ENST00000523210 CEP170Q5SW79 1584 aa29.01■■■□□ 2.24
IGHV3-65-201ENST00000523210 RIMBP3CA6NJZ7 1639 aa29■■■□□ 2.23
IGHV3-65-201ENST00000523210 RIMBP3BA6NNM3 1639 aa29■■■□□ 2.23
IGHV3-65-201ENST00000523210 RIMBP3Q9UFD9 1639 aa29■■■□□ 2.23
IGHV3-65-201ENST00000523210 CHIC1Q5VXU3 224 aa28.93■■■□□ 2.22
IGHV3-65-201ENST00000523210 ARAP1Q96P48 1450 aa28.83■■■□□ 2.21
IGHV3-65-201ENST00000523210 RAPGEF2Q9Y4G8 1499 aa28.83■■■□□ 2.21
IGHV3-65-201ENST00000523210 KIAA0586Q9BVV6 1533 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms