RNA–Protein interactions for RNA: ENST00000522573.5

CSGALNACT1-209, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 5

Gene CSGALNACT1, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-209ENST00000522573 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
CSGALNACT1-209ENST00000522573 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
CSGALNACT1-209ENST00000522573 ABCC9O60706 1549 aa18.79■□□□□ 0.6
CSGALNACT1-209ENST00000522573 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.49
CSGALNACT1-209ENST00000522573 NACADO15069 1562 aa17.96■□□□□ 0.46
CSGALNACT1-209ENST00000522573 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
CSGALNACT1-209ENST00000522573 MYO15BQ96JP2 1530 aa17.73■□□□□ 0.43
CSGALNACT1-209ENST00000522573 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
CSGALNACT1-209ENST00000522573 DCAF8L2P0C7V8 631 aa17.53■□□□□ 0.4
CSGALNACT1-209ENST00000522573 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
CSGALNACT1-209ENST00000522573 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
CSGALNACT1-209ENST00000522573 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
CSGALNACT1-209ENST00000522573 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
CSGALNACT1-209ENST00000522573 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
CSGALNACT1-209ENST00000522573 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
CSGALNACT1-209ENST00000522573 CC2D2AQ9P2K1 1620 aa17.12■□□□□ 0.33
CSGALNACT1-209ENST00000522573 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
CSGALNACT1-209ENST00000522573 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
CSGALNACT1-209ENST00000522573 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
CSGALNACT1-209ENST00000522573 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
CSGALNACT1-209ENST00000522573 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
CSGALNACT1-209ENST00000522573 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
CSGALNACT1-209ENST00000522573 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
CSGALNACT1-209ENST00000522573 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
CSGALNACT1-209ENST00000522573 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
CSGALNACT1-209ENST00000522573 CUX2O14529 1486 aa16.35■□□□□ 0.21
CSGALNACT1-209ENST00000522573 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
CSGALNACT1-209ENST00000522573 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
CSGALNACT1-209ENST00000522573 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
CSGALNACT1-209ENST00000522573 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
CSGALNACT1-209ENST00000522573 KIF21AQ7Z4S6 1674 aa16.17■□□□□ 0.18
CSGALNACT1-209ENST00000522573 MROH2BQ7Z745 1585 aa16.14■□□□□ 0.17
CSGALNACT1-209ENST00000522573 THOC2Q8NI27 1593 aaKnown RBP16.14■□□□□ 0.17
CSGALNACT1-209ENST00000522573 NESP48681 1621 aa16.14■□□□□ 0.17
CSGALNACT1-209ENST00000522573 WIZO95785 1651 aa16.05■□□□□ 0.16
CSGALNACT1-209ENST00000522573 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
CSGALNACT1-209ENST00000522573 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
CSGALNACT1-209ENST00000522573 CADPSQ9ULU8 1353 aa15.92■□□□□ 0.14
CSGALNACT1-209ENST00000522573 WDR62O43379 1518 aa15.89■□□□□ 0.13
CSGALNACT1-209ENST00000522573 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
CSGALNACT1-209ENST00000522573 TOP2AP11388 1531 aaKnown RBP15.83■□□□□ 0.12
CSGALNACT1-209ENST00000522573 CEP164Q9UPV0 1460 aa15.82■□□□□ 0.12
CSGALNACT1-209ENST00000522573 CFTRP13569 1480 aa15.78■□□□□ 0.12
CSGALNACT1-209ENST00000522573 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.11
CSGALNACT1-209ENST00000522573 FANCD2Q9BXW9 1451 aa15.76■□□□□ 0.11
CSGALNACT1-209ENST00000522573 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
CSGALNACT1-209ENST00000522573 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
CSGALNACT1-209ENST00000522573 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
CSGALNACT1-209ENST00000522573 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
CSGALNACT1-209ENST00000522573 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
CSGALNACT1-209ENST00000522573 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
CSGALNACT1-209ENST00000522573 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
CSGALNACT1-209ENST00000522573 EIF4G3O43432 1585 aaKnown RBP15.45■□□□□ 0.06
CSGALNACT1-209ENST00000522573 CHD1O14646 1710 aa15.45■□□□□ 0.06
CSGALNACT1-209ENST00000522573 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
CSGALNACT1-209ENST00000522573 RIMBP3CA6NJZ7 1639 aa15.41■□□□□ 0.06
CSGALNACT1-209ENST00000522573 RIMBP3BA6NNM3 1639 aa15.41■□□□□ 0.06
CSGALNACT1-209ENST00000522573 RIMBP3Q9UFD9 1639 aa15.41■□□□□ 0.06
CSGALNACT1-209ENST00000522573 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
CSGALNACT1-209ENST00000522573 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
CSGALNACT1-209ENST00000522573 ZNF608Q9ULD9 1512 aaPredicted RBP15.39■□□□□ 0.05
CSGALNACT1-209ENST00000522573 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
CSGALNACT1-209ENST00000522573 ARHGEF11O15085 1522 aa15.29■□□□□ 0.04
CSGALNACT1-209ENST00000522573 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
CSGALNACT1-209ENST00000522573 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.03
CSGALNACT1-209ENST00000522573 SOGA1O94964 1423 aa15.2■□□□□ 0.02
CSGALNACT1-209ENST00000522573 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
CSGALNACT1-209ENST00000522573 CUX1P39880 1505 aa15.19■□□□□ 0.02
CSGALNACT1-209ENST00000522573 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
CSGALNACT1-209ENST00000522573 MAGI1Q96QZ7 1491 aaPredicted RBP15.17■□□□□ 0.02
CSGALNACT1-209ENST00000522573 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
CSGALNACT1-209ENST00000522573 CLASP1Q7Z460 1538 aa15.14■□□□□ 0.01
CSGALNACT1-209ENST00000522573 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
CSGALNACT1-209ENST00000522573 GRIN2BQ13224 1484 aa15.12■□□□□ 0.01
CSGALNACT1-209ENST00000522573 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
CSGALNACT1-209ENST00000522573 BIVM-ERCC5R4GMW8 1640 aa15.11■□□□□ 0.01
CSGALNACT1-209ENST00000522573 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
CSGALNACT1-209ENST00000522573 SYNJ2O15056 1496 aa15.09■□□□□ 0.01
CSGALNACT1-209ENST00000522573 ARAP1Q96P48 1450 aa15.09■□□□□ 0.01
CSGALNACT1-209ENST00000522573 FBLN2P98095 1184 aa15.08■□□□□ 0
CSGALNACT1-209ENST00000522573 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
CSGALNACT1-209ENST00000522573 GAPVD1Q14C86 1478 aa15.06■□□□□ 0
CSGALNACT1-209ENST00000522573 CYB5RLQ6IPT4 315 aa15.05■□□□□ -0
CSGALNACT1-209ENST00000522573 TOP2BQ02880 1626 aa15.04■□□□□ -0
CSGALNACT1-209ENST00000522573 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
CSGALNACT1-209ENST00000522573 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
CSGALNACT1-209ENST00000522573 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
CSGALNACT1-209ENST00000522573 ADAMTS12P58397 1594 aa14.97□□□□□ -0.01
CSGALNACT1-209ENST00000522573 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
CSGALNACT1-209ENST00000522573 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
CSGALNACT1-209ENST00000522573 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
CSGALNACT1-209ENST00000522573 CEP170Q5SW79 1584 aa14.9□□□□□ -0.02
CSGALNACT1-209ENST00000522573 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
CSGALNACT1-209ENST00000522573 NUP160Q12769 1436 aa14.87□□□□□ -0.03
CSGALNACT1-209ENST00000522573 FHAD1B1AJZ9 1412 aa14.86□□□□□ -0.03
CSGALNACT1-209ENST00000522573 KIF13AQ9H1H9 1805 aa14.85□□□□□ -0.03
CSGALNACT1-209ENST00000522573 ERCC6L2Q5T890 1561 aa14.81□□□□□ -0.04
CSGALNACT1-209ENST00000522573 CUL7Q14999 1698 aa14.81□□□□□ -0.04
CSGALNACT1-209ENST00000522573 RUSC2Q8N2Y8 1516 aa14.77□□□□□ -0.04
CSGALNACT1-209ENST00000522573 PRG4Q92954 1404 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms