RNA–Protein interactions for RNA: ENST00000522404.5

MRPS27-213, Transcript of mitochondrial ribosomal protein S27, humanhuman

TSL 4

Gene MRPS27, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS27-213ENST00000522404 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
MRPS27-213ENST00000522404 ABCC9O60706 1549 aa30.96■■■□□ 2.55
MRPS27-213ENST00000522404 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
MRPS27-213ENST00000522404 DNAJC5BQ9UF47 199 aa29.44■■■□□ 2.3
MRPS27-213ENST00000522404 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
MRPS27-213ENST00000522404 NACADO15069 1562 aa29.07■■■□□ 2.24
MRPS27-213ENST00000522404 UNC13AQ9UPW8 1703 aa28.79■■■□□ 2.2
MRPS27-213ENST00000522404 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.18
MRPS27-213ENST00000522404 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
MRPS27-213ENST00000522404 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
MRPS27-213ENST00000522404 DCAF8L2P0C7V8 631 aa28.54■■■□□ 2.16
MRPS27-213ENST00000522404 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
MRPS27-213ENST00000522404 DCAF1Q9Y4B6 1507 aa28.04■■■□□ 2.08
MRPS27-213ENST00000522404 CC2D2AQ9P2K1 1620 aa28.03■■■□□ 2.08
MRPS27-213ENST00000522404 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
MRPS27-213ENST00000522404 CECR2Q9BXF3 1484 aa27.96■■■□□ 2.07
MRPS27-213ENST00000522404 EIF4G1Q04637 1599 aaKnown RBP27.87■■■□□ 2.05
MRPS27-213ENST00000522404 SCRIBQ14160 1630 aa27.82■■■□□ 2.04
MRPS27-213ENST00000522404 DNAJC5Q9H3Z4 198 aa27.37■■□□□ 1.97
MRPS27-213ENST00000522404 CUX2O14529 1486 aa26.96■■□□□ 1.91
MRPS27-213ENST00000522404 NCAPD3P42695 1498 aa26.83■■□□□ 1.89
MRPS27-213ENST00000522404 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
MRPS27-213ENST00000522404 ATAD2BQ9ULI0 1458 aa26.67■■□□□ 1.86
MRPS27-213ENST00000522404 HMGXB3Q12766 1538 aa26.63■■□□□ 1.85
MRPS27-213ENST00000522404 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
MRPS27-213ENST00000522404 SMARCA4P51532 1647 aa26.56■■□□□ 1.84
MRPS27-213ENST00000522404 NESP48681 1621 aa26.5■■□□□ 1.83
MRPS27-213ENST00000522404 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
MRPS27-213ENST00000522404 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
MRPS27-213ENST00000522404 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
MRPS27-213ENST00000522404 BAZ1AQ9NRL2 1556 aaPredicted RBP26.34■■□□□ 1.81
MRPS27-213ENST00000522404 LAMC3Q9Y6N6 1575 aa26.32■■□□□ 1.8
MRPS27-213ENST00000522404 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
MRPS27-213ENST00000522404 PDS5BQ9NTI5 1447 aa26.1■■□□□ 1.77
MRPS27-213ENST00000522404 MROH2BQ7Z745 1585 aa26.09■■□□□ 1.77
MRPS27-213ENST00000522404 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
MRPS27-213ENST00000522404 WDR62O43379 1518 aa25.93■■□□□ 1.74
MRPS27-213ENST00000522404 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
MRPS27-213ENST00000522404 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
MRPS27-213ENST00000522404 WIZO95785 1651 aa25.77■■□□□ 1.72
MRPS27-213ENST00000522404 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
MRPS27-213ENST00000522404 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
MRPS27-213ENST00000522404 CFTRP13569 1480 aa25.6■■□□□ 1.69
MRPS27-213ENST00000522404 OSCARQ8IYS5 282 aa25.53■■□□□ 1.68
MRPS27-213ENST00000522404 URB2Q14146 1524 aaKnown RBP25.5■■□□□ 1.67
MRPS27-213ENST00000522404 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
MRPS27-213ENST00000522404 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
MRPS27-213ENST00000522404 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
MRPS27-213ENST00000522404 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
MRPS27-213ENST00000522404 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
MRPS27-213ENST00000522404 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
MRPS27-213ENST00000522404 ZNF608Q9ULD9 1512 aaPredicted RBP25.23■■□□□ 1.63
MRPS27-213ENST00000522404 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
MRPS27-213ENST00000522404 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
MRPS27-213ENST00000522404 TOPBP1Q92547 1522 aa25.14■■□□□ 1.62
MRPS27-213ENST00000522404 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
MRPS27-213ENST00000522404 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
MRPS27-213ENST00000522404 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
MRPS27-213ENST00000522404 DNMBPQ6XZF7 1577 aa25.03■■□□□ 1.6
MRPS27-213ENST00000522404 CHD1O14646 1710 aa25.03■■□□□ 1.6
MRPS27-213ENST00000522404 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
MRPS27-213ENST00000522404 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
MRPS27-213ENST00000522404 CYB5RLQ6IPT4 315 aa24.92■■□□□ 1.58
MRPS27-213ENST00000522404 AQRO60306 1485 aaKnown RBP eCLIP24.91■■□□□ 1.58
MRPS27-213ENST00000522404 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
MRPS27-213ENST00000522404 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
MRPS27-213ENST00000522404 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
MRPS27-213ENST00000522404 CLASP1Q7Z460 1538 aa24.75■■□□□ 1.55
MRPS27-213ENST00000522404 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
MRPS27-213ENST00000522404 FBLN2P98095 1184 aa24.71■■□□□ 1.55
MRPS27-213ENST00000522404 SOGA1O94964 1423 aa24.68■■□□□ 1.54
MRPS27-213ENST00000522404 SNAPC4Q5SXM2 1469 aa24.67■■□□□ 1.54
MRPS27-213ENST00000522404 TDRD9Q8NDG6 1382 aaKnown RBP24.66■■□□□ 1.54
MRPS27-213ENST00000522404 SYNJ1O43426 1573 aa24.64■■□□□ 1.54
MRPS27-213ENST00000522404 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
MRPS27-213ENST00000522404 FGD5Q6ZNL6 1462 aa24.62■■□□□ 1.53
MRPS27-213ENST00000522404 CUX1P39880 1505 aa24.56■■□□□ 1.52
MRPS27-213ENST00000522404 GRIN2BQ13224 1484 aa24.55■■□□□ 1.52
MRPS27-213ENST00000522404 SYNJ2O15056 1496 aa24.54■■□□□ 1.52
MRPS27-213ENST00000522404 CHMP7Q8WUX9 453 aaPredicted RBP24.51■■□□□ 1.51
MRPS27-213ENST00000522404 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
MRPS27-213ENST00000522404 GAPVD1Q14C86 1478 aa24.43■■□□□ 1.5
MRPS27-213ENST00000522404 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.5
MRPS27-213ENST00000522404 AEBP2Q6ZN18 517 aaPredicted RBP24.35■■□□□ 1.49
MRPS27-213ENST00000522404 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
MRPS27-213ENST00000522404 ERCC6L2Q5T890 1561 aa24.28■■□□□ 1.48
MRPS27-213ENST00000522404 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
MRPS27-213ENST00000522404 ADAMTS12P58397 1594 aa24.22■■□□□ 1.47
MRPS27-213ENST00000522404 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
MRPS27-213ENST00000522404 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
MRPS27-213ENST00000522404 NUP160Q12769 1436 aa24.21■■□□□ 1.47
MRPS27-213ENST00000522404 KIF13AQ9H1H9 1805 aa24.14■■□□□ 1.45
MRPS27-213ENST00000522404 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
MRPS27-213ENST00000522404 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
MRPS27-213ENST00000522404 FHAD1B1AJZ9 1412 aa24.07■■□□□ 1.44
MRPS27-213ENST00000522404 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
MRPS27-213ENST00000522404 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
MRPS27-213ENST00000522404 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
MRPS27-213ENST00000522404 RUSC2Q8N2Y8 1516 aa23.9■■□□□ 1.42
MRPS27-213ENST00000522404 MAPKBP1O60336 1514 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms