RNA–Protein interactions for RNA: ENST00000522266.1

REPIN1-219, Transcript of replication initiator 1, humanhuman

TSL 2

Gene REPIN1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-219ENST00000522266 NISCHQ9Y2I1 1504 aa56.35■■■■■ 6.61
REPIN1-219ENST00000522266 CCDC180Q9P1Z9 1646 aa50.11■■■■■ 5.61
REPIN1-219ENST00000522266 ABCC9O60706 1549 aa48.55■■■■■ 5.36
REPIN1-219ENST00000522266 NACADO15069 1562 aa47.06■■■■■ 5.12
REPIN1-219ENST00000522266 RB1CC1Q8TDY2 1594 aa47.03■■■■■ 5.12
REPIN1-219ENST00000522266 ZCCHC6Q5VYS8 1495 aaKnown RBP46.97■■■■■ 5.11
REPIN1-219ENST00000522266 MYO15BQ96JP2 1530 aa46.93■■■■■ 5.1
REPIN1-219ENST00000522266 DCAF8L2P0C7V8 631 aa46.89■■■■■ 5.1
REPIN1-219ENST00000522266 DCAF1Q9Y4B6 1507 aa46.78■■■■■ 5.08
REPIN1-219ENST00000522266 UNC13AQ9UPW8 1703 aa45.83■■■■■ 4.93
REPIN1-219ENST00000522266 SCRIBQ14160 1630 aa45.52■■■■■ 4.88
REPIN1-219ENST00000522266 BICRAQ9NZM4 1560 aa45.42■■■■■ 4.86
REPIN1-219ENST00000522266 PABPN1Q86U42 306 aaKnown RBP eCLIP45.36■■■■■ 4.85
REPIN1-219ENST00000522266 SHROOM4Q9ULL8 1493 aa45.26■■■■■ 4.84
REPIN1-219ENST00000522266 DNAJC5BQ9UF47 199 aa44.53■■■■■ 4.72
REPIN1-219ENST00000522266 EIF4G1Q04637 1599 aaKnown RBP44.26■■■■■ 4.68
REPIN1-219ENST00000522266 CC2D2AQ9P2K1 1620 aa44.01■■■■■ 4.64
REPIN1-219ENST00000522266 BAZ1AQ9NRL2 1556 aaPredicted RBP43.73■■■■■ 4.59
REPIN1-219ENST00000522266 CECR2Q9BXF3 1484 aa43.73■■■■■ 4.59
REPIN1-219ENST00000522266 SMARCA4P51532 1647 aa43.66■■■■■ 4.58
REPIN1-219ENST00000522266 SMARCA2P51531 1590 aa43.42■■■■■ 4.54
REPIN1-219ENST00000522266 NCAPD3P42695 1498 aa43.38■■■■■ 4.53
REPIN1-219ENST00000522266 ATAD2BQ9ULI0 1458 aa43.36■■■■■ 4.53
REPIN1-219ENST00000522266 MROH2BQ7Z745 1585 aa43.33■■■■■ 4.53
REPIN1-219ENST00000522266 PEG3Q9GZU2 1588 aa43.32■■■■■ 4.52
REPIN1-219ENST00000522266 HMGXB3Q12766 1538 aa43.19■■■■■ 4.5
REPIN1-219ENST00000522266 BAZ1BQ9UIG0 1483 aaKnown RBP43.04■■■■■ 4.48
REPIN1-219ENST00000522266 RSF1Q96T23 1441 aaPredicted RBP42.97■■■■■ 4.47
REPIN1-219ENST00000522266 WIZO95785 1651 aa42.89■■■■■ 4.46
REPIN1-219ENST00000522266 TOP2AP11388 1531 aaKnown RBP42.54■■■■■ 4.4
REPIN1-219ENST00000522266 LAMC3Q9Y6N6 1575 aa42.22■■■■■ 4.35
REPIN1-219ENST00000522266 CADPSQ9ULU8 1353 aa42.1■■■■■ 4.33
REPIN1-219ENST00000522266 NESP48681 1621 aa42.04■■■■■ 4.32
REPIN1-219ENST00000522266 SUPT5HO00267 1087 aaKnown RBP42■■■■■ 4.31
REPIN1-219ENST00000522266 CCDC88BA6NC98 1476 aa41.98■■■■■ 4.31
REPIN1-219ENST00000522266 ERCC6Q03468 1493 aa41.94■■■■■ 4.3
REPIN1-219ENST00000522266 PDS5BQ9NTI5 1447 aa41.94■■■■■ 4.3
REPIN1-219ENST00000522266 CFTRP13569 1480 aa41.89■■■■■ 4.3
REPIN1-219ENST00000522266 PRDM2Q13029 1718 aa41.66■■■■■ 4.26
REPIN1-219ENST00000522266 KIF21AQ7Z4S6 1674 aa41.64■■■■■ 4.26
REPIN1-219ENST00000522266 FANCD2Q9BXW9 1451 aa41.57■■■■■ 4.25
REPIN1-219ENST00000522266 CEP164Q9UPV0 1460 aa41.53■■■■■ 4.24
REPIN1-219ENST00000522266 CUX2O14529 1486 aa41.5■■■■■ 4.23
REPIN1-219ENST00000522266 THOC2Q8NI27 1593 aaKnown RBP41.46■■■■■ 4.23
REPIN1-219ENST00000522266 MRC2Q9UBG0 1479 aa41.41■■■■■ 4.22
REPIN1-219ENST00000522266 DNAJC5Q9H3Z4 198 aa41.31■■■■■ 4.2
REPIN1-219ENST00000522266 WDR62O43379 1518 aa41.26■■■■■ 4.2
REPIN1-219ENST00000522266 ABCC8Q09428 1581 aa41.15■■■■■ 4.18
REPIN1-219ENST00000522266 URB2Q14146 1524 aaKnown RBP41.07■■■■■ 4.16
REPIN1-219ENST00000522266 DNMBPQ6XZF7 1577 aa40.94■■■■■ 4.14
REPIN1-219ENST00000522266 TOPBP1Q92547 1522 aa40.93■■■■■ 4.14
REPIN1-219ENST00000522266 IFT140Q96RY7 1462 aa40.68■■■■■ 4.1
REPIN1-219ENST00000522266 CUX1P39880 1505 aa40.65■■■■■ 4.1
REPIN1-219ENST00000522266 POLA1P09884 1462 aaPredicted RBP40.58■■■■■ 4.09
REPIN1-219ENST00000522266 WRNQ14191 1432 aaPredicted RBP eCLIP40.57■■■■■ 4.08
REPIN1-219ENST00000522266 FGD5Q6ZNL6 1462 aa40.51■■■■■ 4.07
REPIN1-219ENST00000522266 SOGA1O94964 1423 aa40.47■■■■■ 4.07
REPIN1-219ENST00000522266 TOP2BQ02880 1626 aa40.46■■■■■ 4.07
REPIN1-219ENST00000522266 BIVM-ERCC5R4GMW8 1640 aa40.46■■■■■ 4.07
REPIN1-219ENST00000522266 TARBP1Q13395 1621 aaKnown RBP40.45■■■■■ 4.07
REPIN1-219ENST00000522266 WDR97A6NE52 1622 aa40.36■■■■■ 4.05
REPIN1-219ENST00000522266 SYNJ1O43426 1573 aa40.35■■■■■ 4.05
REPIN1-219ENST00000522266 RAD54L2Q9Y4B4 1467 aa40.32■■■■■ 4.04
REPIN1-219ENST00000522266 ZNF608Q9ULD9 1512 aaPredicted RBP40.3■■■■■ 4.04
REPIN1-219ENST00000522266 EIF4G3O43432 1585 aaKnown RBP40.23■■■■■ 4.03
REPIN1-219ENST00000522266 ABCA10Q8WWZ4 1543 aa40.21■■■■■ 4.03
REPIN1-219ENST00000522266 AQRO60306 1485 aaKnown RBP eCLIP40.13■■■■■ 4.022e-10■■■■■ 52.5
REPIN1-219ENST00000522266 TDRD9Q8NDG6 1382 aaKnown RBP40.11■■■■■ 4.01
REPIN1-219ENST00000522266 GAPVD1Q14C86 1478 aa40■■■■□ 3.99
REPIN1-219ENST00000522266 GRIN2BQ13224 1484 aa40■■■■□ 3.99
REPIN1-219ENST00000522266 ABCA5Q8WWZ7 1642 aa39.98■■■■□ 3.99
REPIN1-219ENST00000522266 MAGI1Q96QZ7 1491 aaPredicted RBP39.89■■■■□ 3.98
REPIN1-219ENST00000522266 PBRM1Q86U86 1689 aa39.89■■■■□ 3.98
REPIN1-219ENST00000522266 OSCARQ8IYS5 282 aa39.82■■■■□ 3.97
REPIN1-219ENST00000522266 SNAPC4Q5SXM2 1469 aa39.8■■■■□ 3.96
REPIN1-219ENST00000522266 TRIM41Q8WV44 630 aa39.79■■■■□ 3.96
REPIN1-219ENST00000522266 ERICH3Q5RHP9 1530 aa39.77■■■■□ 3.96
REPIN1-219ENST00000522266 KIF27Q86VH2 1401 aa39.75■■■■□ 3.95
REPIN1-219ENST00000522266 SYNJ2O15056 1496 aa39.7■■■■□ 3.95
REPIN1-219ENST00000522266 CHD1O14646 1710 aa39.68■■■■□ 3.94
REPIN1-219ENST00000522266 CHMP7Q8WUX9 453 aaPredicted RBP39.67■■■■□ 3.94
REPIN1-219ENST00000522266 FBLN2P98095 1184 aa39.65■■■■□ 3.94
REPIN1-219ENST00000522266 FHAD1B1AJZ9 1412 aa39.59■■■■□ 3.93
REPIN1-219ENST00000522266 ADAMTS12P58397 1594 aa39.56■■■■□ 3.92
REPIN1-219ENST00000522266 IGF1RP08069 1367 aa39.49■■■■□ 3.91
REPIN1-219ENST00000522266 CUL7Q14999 1698 aa39.48■■■■□ 3.91
REPIN1-219ENST00000522266 GRIN2AQ12879 1464 aa39.44■■■■□ 3.9
REPIN1-219ENST00000522266 CHIC1Q5VXU3 224 aa39.38■■■■□ 3.89
REPIN1-219ENST00000522266 CARMIL1Q5VZK9 1371 aa39.3■■■■□ 3.88
REPIN1-219ENST00000522266 CLASP1Q7Z460 1538 aa39.28■■■■□ 3.88
REPIN1-219ENST00000522266 NUP160Q12769 1436 aa39.26■■■■□ 3.88
REPIN1-219ENST00000522266 EEA1Q15075 1411 aa39.25■■■■□ 3.87
REPIN1-219ENST00000522266 RUSC2Q8N2Y8 1516 aa39.23■■■■□ 3.87
REPIN1-219ENST00000522266 CEP170Q5SW79 1584 aa39.16■■■■□ 3.86
REPIN1-219ENST00000522266 RAPGEF2Q9Y4G8 1499 aa39.11■■■■□ 3.85
REPIN1-219ENST00000522266 ARHGEF11O15085 1522 aa39.06■■■■□ 3.84
REPIN1-219ENST00000522266 CSRNP3Q8WYN3 585 aa39.06■■■■□ 3.84
REPIN1-219ENST00000522266 RIMBP3CA6NJZ7 1639 aa39.03■■■■□ 3.84
REPIN1-219ENST00000522266 RIMBP3BA6NNM3 1639 aa39.03■■■■□ 3.84
REPIN1-219ENST00000522266 RIMBP3Q9UFD9 1639 aa39.03■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms